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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024216 ID=TCONS_00024216|Name=TCONS_00024216|organism=Clytia hemisphaerica|type=transcript|length=956bp
ATCATAGAGGGTTAAAAGGAACGAAAGGGAGAACCAATGTCAGTGGCTTT
ACATCCCACCTCGTCTTAACAAACATCTCAACGACATGGAGTTTTGTTTG
ACGTCaaagtttgaatgtttttttacataaattcaattttacgtgcttta
aagttataaatttcataaaaactttcttatctgatattttttctttcaca
aGTTTGGACCAGTGAGGTTTTTATGATGTTTCCACTTTTAGTAAGTAGCG
GGGCTTTACGTTTTTAACGGAAGGGCTAAGCCCGTGACTTGATTTGCTTC
TGTGTGGGATATATTTAACAGATTGTTCGAGTTAATCAGTTAAAATGTTT
TCTTACGTGTAGGCAGTTTGttgacattcttaccaaatcaaaaagtctct
caaagttCTGGTTATTTTCTAGTTGGAACACAACGTTCTCTAATCGTCCA
TCTAATGTCcctaacgtccatataacgttagatgaacgtcgaaacgacgt
tgtgtgccagcttcgTTAGTAAAAGTGAATCATTTCATCGTAAATTGAAC
AGATGATGATCACGGATTGAATATAGTGTTTGTTGGTTAGGAAAAATCGT
CCATTCAAATTGCGGTTTTACATTCAGGTTTCTTTCATTATTGAcattac
aaaaaaaatcaaattcaatatgTGAATATGGTTTTTCACCAGCTcataaa
aattgtttgtttgcACGGAATACGGATGAACGAAAGATAGAAATGAGATT
GAAATGTTGTGTAGTTTGTGaatggaaattattttttcaaaaagaggtTT
TGACAAACTAGGAACAGCAGCAAACAGTAGATAGACTTTCCAgtgatgtt
tttttcattttagaacAAGAGTCAGTGTTAGCCATACAAAAGATTTTCGA
ACTGGATTCGCTCATATGATTGTTGCAAAAATTCTAGCTGAGAAGAGAGA
AAATTC Run BLAST on NCBI transcript from alignment at sc0000478:86080..87035 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024216 ID=TCONS_00024216|Name=TCONS_00024216|organism=Clytia hemisphaerica|type=transcript|length=956bp|location=Sequence derived from alignment at sc0000478:86080..87035 (Clytia hemisphaerica)
GAATTTTCTCTCTTCTCAGCTAGAATTTTTGCAACAATCATATGAGCGAA
TCCAGTTCGAAAATCTTTTGTATGGCTAACACTGACTCTTgttctaaaat
gaaaaaaacatcacTGGAAAGTCTATCTACTGTTTGCTGCTGTTCCTAGT
TTGTCAAAacctctttttgaaaaaataatttccattCACAAACTACACAA
CATTTCAATCTCATTTCTATCTTTCGTTCATCCGTATTCCGTgcaaacaa
acaatttttatgAGCTGGTGAAAAACCATATTCAcatattgaatttgatt
ttttttgtaatgTCAATAATGAAAGAAACCTGAATGTAAAACCGCAATTT
GAATGGACGATTTTTCCTAACCAACAAACACTATATTCAATCCGTGATCA
TCATCTGTTCAATTTACGATGAAATGATTCACTTTTACTAAcgaagctgg
cacacaacgtcgtttcgacgttcatctaacgttatatggacgttaggGAC
ATTAGATGGACGATTAGAGAACGTTGTGTTCCAACTAGAAAATAACCAGa
actttgagagactttttgatttggtaagaatgtcaaCAAACTGCCTACAC
GTAAGAAAACATTTTAACTGATTAACTCGAACAATCTGTTAAATATATCC
CACACAGAAGCAAATCAAGTCACGGGCTTAGCCCTTCCGTTAAAAACGTA
AAGCCCCGCTACTTACTAAAAGTGGAAACATCATAAAAACCTCACTGGTC
CAAACttgtgaaagaaaaaatatcagataagaaagtttttatgaaattta
taactttaaagcacgtaaaattgaatttatgtaaaaaaacattcaaactt
tGACGTCAAACAAAACTCCATGTCGTTGAGATGTTTGTTAAGACGAGGTG
GGATGTAAAGCCACTGACATTGGTTCTCCCTTTCGTTCCTTTTAACCCTC
TATGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00024216-exon-sc0000478-1491911889:86080..87035 | TCONS_00024216-exon-sc0000478-1491911889:86080..87035 | Clytia hemisphaerica | exon |
| TCONS_00024216-exon-sc0000478-1510915933:86080..87035 | TCONS_00024216-exon-sc0000478-1510915933:86080..87035 | Clytia hemisphaerica | exon |
| TCONS_00024216-exon-sc0000478-1575043694:86080..87035 | TCONS_00024216-exon-sc0000478-1575043694:86080..87035 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000478 | supercontig | sc0000478:86080..87035 . |
Blast
The following BLAST results are available for this feature:
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