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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024297 ID=TCONS_00024297|Name=TCONS_00024297|organism=Clytia hemisphaerica|type=transcript|length=1628bp
ATGGGCtcaaactttcactttcatGAACATCTAATCCACTCGGCTTTTGA
CTTTCGTCTAAGTAAAGACAATATTTTCAGCAATATCGGATTGATAATAC
TGTTCAAAAAATCTAGTCTAGGACGACATACTTCAAATATGTGCTGTAGT
TGAAAATATGGAGATGGCTTAACTTTAGACTAAAATCAACTTActttgaa
aaaccaaactttcgaATAGGTTTTAAAATAGGTTTTCCCAGGTGAAGGGT
AGGAACCACCTCACCTTCGACTCTCGGTCCCTTATAGCAAGATTAAAAAA
GGAGAAGAAAAGGAGAGTTTTGTAGAATTTACAACCCTTTTATagagaca
aatttgaccaaatttcagtttttcaagcagaaaaaaagcttaaatttcCT
TCTTTTCTGACCCTTCGTGGAACTgagatttgattttcaaatttttccga
cccttactgggactaaCTTGTcccaaaaaggcacccttaaagGGCGGCAC
ATATCCGTACCCTTCACTGGCCTAGGTATCCCCCATGTTTCTAACTTGCT
TGTCATTAACCTCGTTTTTATTGGACTGACATATACAAGTTAGCCTCTCG
TGTGCTACGCTgtaataccttaagtggataaattttggcgtgtaTTTCAT
TTGGCGAATGACCAAAATGTGATttttggcgggtatttaattttCCAAAT
gctcaattttgtaaaatttgacggggatttaatttgacgaaagacaaaaa
aagtgttttttattaAGGTGTTTTGTTGAAGCTCgagaatagaaaaaata
ataggTGTATGTATgtttcatacacgttttttttttaagaaattagtttt
accaagcagcctcaatgttttttaagaagttggctttttgagccttaaat
gtttcttacatttttctaaACTTCTTCAAGCTTTaaggacgcatgtcgat
aatacaatagtctaatagactaatctacggtacttctatattgattttct
aACTATTATGTAAGTATTTCTTTCGGAACTTtgccttgattggaaggttc
ttaaaaaaaacgagttgaaaaatattattttctcattctcagcctcagca
tgttttttagatgtttcttagtttttaggcattctgaacctcatgtttct
taaaaaaaaaacgtgcattttctttatagcataatatcaaaacctTATCA
GAAAATTTATGCTGGAATCAAGATGAATTATGCCTAGGCTGGGCGCATAC
TGATTTTTAGATATAGGAGATGCGTATCGAGTAAAAAACTCCCGTCCGAG
AATTAtcccaaatttgaaaaaaccttttttattttaacatcGGCTACTTA
ACTTCTACTGCCGGACAGGAATTTCTTAGACGATGACTTCAACCTTCCTT
TACCAAATGCACTTTTTATTTGAGCGTTATGGTGCACCGATGAAACTgcg
tttaattttctttttcttcattattgCTCCAATAAGATTATTACCTAACT
CGCTTTGTATCAGGAAGAAACCATCATGcacttaaaaataaaataattcc
cTCATTTGCATTTTTACAGGAAATTTAAAATAAAGTCATAAATAAACCAt
tatcattaagaaaatataaaaaaactcg Run BLAST on NCBI transcript from alignment at sc0000486:157204..158831 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024297 ID=TCONS_00024297|Name=TCONS_00024297|organism=Clytia hemisphaerica|type=transcript|length=1628bp|location=Sequence derived from alignment at sc0000486:157204..158831 (Clytia hemisphaerica)
cgagtttttttatattttcttaatgataaTGGTTTATTTATGACTTTATT
TTAAATTTCCTGTAAAAATGCAAATGAgggaattattttatttttaagtg
CATGATGGTTTCTTCCTGATACAAAGCGAGTTAGGTAATAATCTTATTGG
AGcaataatgaagaaaaagaaaattaaacgcAGTTTCATCGGTGCACCAT
AACGCTCAAATAAAAAGTGCATTTGGTAAAGGAAGGTTGAAGTCATCGTC
TAAGAAATTCCTGTCCGGCAGTAGAAGTTAAGTAGCCgatgttaaaataa
aaaaggttttttcaaatttgggaTAATTCTCGGACGGGAGTTTTTTACTC
GATACGCATCTCCTATATCTAAAAATCAGTATGCGCCCAGCCTAGGCATA
ATTCATCTTGATTCCAGCATAAATTTTCTGATAaggttttgatattatgc
tataaagaaaatgcacgttttttttttaagaaacatgaggttcagaatgc
ctaaaaactaagaaacatctaaaaaacatgctgaggctgagaatgagaaa
ataatatttttcaactcgttttttttaagaaccttccaatcaaggcaAAG
TTCCGAAAGAAATACTTACATAATAGTtagaaaatcaatatagaagtacc
gtagattagtctattagactattgtattatcgacatgcgtccttAAAGCT
TGAAGAAGTttagaaaaatgtaagaaacatttaaggctcaaaaagccaac
ttcttaaaaaacattgaggctgcttggtaaaactaatttcttaaaaaaaa
aacgtgtatgaaacATACATACAcctattattttttctattctcGAGCTT
CAACAAAACACCTtaataaaaaacactttttttgtctttcgtcaaattaa
atccccgtcaaattttacaaaattgagcATTTGGaaaattaaatacccgc
caaaaATCACATTTTGGTCATTCGCCAAATGAAAtacacgccaaaattta
tccacttaaggtattacAGCGTAGCACACGAGAGGCTAACTTGTATATGT
CAGTCCAATAAAAACGAGGTTAATGACAAGCAAGTTAGAAACATGGGGGA
TACCTAGGCCAGTGAAGGGTACGGATATGTGCCGCCctttaagggtgcct
ttttgggACAAGttagtcccagtaagggtcggaaaaatttgaaaatcaaa
tctcAGTTCCACGAAGGGTCAGAAAAGAAGgaaatttaagctttttttct
gcttgaaaaactgaaatttggtcaaatttgtctctATAAAAGGGTTGTAA
ATTCTACAAAACTCTCCTTTTCTTCTCCTTTTTTAATCTTGCTATAAGGG
ACCGAGAGTCGAAGGTGAGGTGGTTCCTACCCTTCACCTGGGAAAACCTA
TTTTAAAACCTATtcgaaagtttggtttttcaaagTAAGTTGATTTTAGT
CTAAAGTTAAGCCATCTCCATATTTTCAACTACAGCACATATTTGAAGTA
TGTCGTCCTAGACTAGATTTTTTGAACAGTATTATCAATCCGATATTGCT
GAAAATATTGTCTTTACTTAGACGAAAGTCAAAAGCCGAGTGGATTAGAT
GTTCatgaaagtgaaagtttgaGCCCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00024297-exon-sc0000486-1491911889:157204..158831 | TCONS_00024297-exon-sc0000486-1491911889:157204..158831 | Clytia hemisphaerica | exon |
| TCONS_00024297-exon-sc0000486-1510915933:157204..158831 | TCONS_00024297-exon-sc0000486-1510915933:157204..158831 | Clytia hemisphaerica | exon |
| TCONS_00024297-exon-sc0000486-1575043694:157204..158831 | TCONS_00024297-exon-sc0000486-1575043694:157204..158831 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000486 | supercontig | sc0000486:157204..158831 . |
Blast
The following BLAST results are available for this feature:
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