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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024395 ID=TCONS_00024395|Name=TCONS_00024395|organism=Clytia hemisphaerica|type=transcript|length=426bp
ATTAGTTGGCAAAACTTGAAGACTTTATTCCAGACCTTCCAAAGAaacaa
gaaatcaaaatcaacgAAGAAATTAAAGACTTAAATGACAAAATGAATAT
ATTGGAGCGAAAATTAAATGATGCTGATTCAACTCACTGGCAGGGAATGT
TCGAGCGGGTGCCACTGTGGTGATATTGCTCCGAAAGATATAGTATTCAA
GGTGGAATAATATCAATACGGTTGTCATATTATTTGAAAAGCGATCTCCC
GTTTTCGAGGACAATTTCGATTTCGTGCAAGTATATTTTGGTATCACATA
ATTGTTGTTTGAGTTGTAAGCGTTACGACAACATACTCGACTTCAAGgac
tttcattttgttttgtttcttgttctaaattttttgtctttttctttttt
ttcatttccttaATTTTTTTACCTGT Run BLAST on NCBI transcript from alignment at sc0000491:247953..249854+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024395 ID=TCONS_00024395|Name=TCONS_00024395|organism=Clytia hemisphaerica|type=transcript|length=1902bp|location=Sequence derived from alignment at sc0000491:247953..249854+ (Clytia hemisphaerica)
ATTAGTTGGCAAAACTTGAAGACTTTATTCCAGACCTTCCAAAGAaacaa
gaaatcaaaatcaacgAAGAAATTAAAGACTTAAATGACAAAATGAATAT
ATTGGAGCGAAAATTAAATGTGAGTTACCCTTTTCTTAAAATGCATTAGA
TGTATTAaaccgtcacccggcgtcgcacccgccgagtagagtgttgttga
gcacatcaaaagccctttggatggtgagGGAGGGTAATAAGCTTGAATTC
TAAGtccaaagaacgaaatattaccacttatCACTGATTGAAGCTCGAGA
AATCGCATATTTaatgtttggtgacgtcatttgggccctaaatgacgtca
tcgaaaagtGATGAATTGTTCACATCACTGAAATGAATTAATTATTTACC
CAAAAGATTCTCTAGATGaattccgatccaatgaggggtcatccattgct
taaatccttctcaaactcgagatattgtataTTTCAggatttgatgacgt
catcggacccaaaatgcctCAATTCGAATATATTTACTTTCGAAAGTTTC
TTtatacccactcttacccctcccaacttattctccattaaatttcagat
ccaatgaggggtcaaccatctcctaactcctttccaatctccagatatcg
catttttccggttttgatgacgtcatcaactgaaaacgcccaaaaattca
gccaaatttcaaagtcgCACTCAAGCCAAATAAACCCTACaatcttattc
tccataaaattctcgatccaatgaggggtcaccgaccttcCAACttcttt
tcaaactcgagatatcgcattatgaagcttttcccaaatctgtgacgtca
ttcggtccctttacccctaattttgtcaacggtcaattcgcgaattttgg
aatttttgcggtcaacgggtagcttatgNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttatgccccaagggtcccaa
aaaaacaaaaaacgtcaattatttccacgggaaagtgggtttttaaattt
gcgaaagatttgcactgcaacgacttctccttaaaaacgctaattttcac
actcttcccctgaccactttcgctttcgttttcaaccacccatccatcca
accaaccaaaaaatcggtcacgtaactttgaaacccccatctcaaaaatc
caaaatgactcccccacggctcatagagaattCTACGTTTAGTAGCACTC
TACTCTCAGGAAAACCAGAATTGTGTTTGGGCGAGAATGACGATTTCACT
CCTCCCGCTTTAGTGGCTTCCATCCTaccagccttattggaacatttttg
agctttttgatCCCGAGATAATAAGTGCTAAGGTCTTTTAGTTAAACCAC
TTAAAATATGTTCTAAGTTTTACAGAGGCAATTTTCTCTCACCACTTTAC
AGAGCTTTGATTATGTTACACAATCTTTAATGGGTAGAACTGTGCCCAAC
TACTGATGAAGGAGGTTTCGTagtctttattttcattaatgtgcagttta
atgtttttataataACTCAAATAATGATTTTTCCATTACTCTTAGGATGC
TGATTCAACTCACTGGCAGGGAATGTTCGAGCGGGTGCCACTGTGGTGAT
ATTGCTCCGAAAGATATAGTATTCAAGGTGGAATAATATCAATACGGTTG
TCATATTATTTGAAAAGCGATCTCCCGTTTTCGAGGACAATTTCGATTTC
GTGCAAGTATATTTTGGTATCACATAATTGTTGTTTGAGTTGTAAGCGTT
ACGACAACATACTCGACTTCAAGgactttcattttgttttgtttcttgtt
ctaaattttttgtctttttcttttttttcatttccttaATTTTTTTACCT
GT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00024395-exon-sc0000491-1491911889:247953..248071 | TCONS_00024395-exon-sc0000491-1491911889:247953..248071 | Clytia hemisphaerica | exon |
| TCONS_00024395-exon-sc0000491-1510915933:247953..248071 | TCONS_00024395-exon-sc0000491-1510915933:247953..248071 | Clytia hemisphaerica | exon |
| TCONS_00024395-exon-sc0000491-1575043694:247953..248071 | TCONS_00024395-exon-sc0000491-1575043694:247953..248071 | Clytia hemisphaerica | exon |
| TCONS_00024395-exon-sc0000491-1491911889:249548..249854 | TCONS_00024395-exon-sc0000491-1491911889:249548..249854 | Clytia hemisphaerica | exon |
| TCONS_00024395-exon-sc0000491-1510915933:249548..249854 | TCONS_00024395-exon-sc0000491-1510915933:249548..249854 | Clytia hemisphaerica | exon |
| TCONS_00024395-exon-sc0000491-1575043694:249548..249854 | TCONS_00024395-exon-sc0000491-1575043694:249548..249854 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000491 | supercontig | sc0000491:247953..249854 + |
Blast
The following BLAST results are available for this feature:
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