TCONS_00024429 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024429
Unique NameTCONS_00024429
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3227

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024429 ID=TCONS_00024429|Name=TCONS_00024429|organism=Clytia hemisphaerica|type=transcript|length=3227bp
GCTTTCATCTCAAAGATCGTGcgcttcaaaacaaaaacaaatcagAATCA
GAACATCgacgaaaaaatatattttatttctttgattgATCCTTTTTCCA
GTTTCTAACAATGTCTAGAAGAAGAATGTCAAATTCACAAGATGTCTTTA
TAGCGTGTAGGGTTGGAGATGTAAGATGGCTTGAGAAAATCACAAGtaat
gaaaaggaaaaacaagCAGCCCTTTCCACAAGAGACGGAAAGGGATTTTT
ACCGATTCACATAGCCGCAATGGAATGCAAACTGGATGCATTGAAATATC
TGGTGGAGAAGCTCAGTTGCTGCATTGATTCAGCCACTCTATCAGGATGG
ACTGCCTTACATTTCTCAATCAATAATAGCAAAAAAATGGAATCACTGAA
GTGTATGGATTACTTGCTGATGAAAGGGGCTGACATTGACAGGCAAACAG
ATCATGGTATGAGTGCTCTACATCTTGCGAGTTCAATTGGGCACATAGAA
GAAGTTAGACTACTTCTAAAACGAGGAGCCACGGTAGATCTCAAGGATAC
ATCGAACAGGATGGCTTTCATTTATGCAACTTTATGGGGACATCAAAAAG
TGGCTCGATTACTTGCGCATCAGATGTGGTTCAAACAGAAGAATGATAAG
GAGTTATCGAGGCAAACTTTTGATAAATATTCGAATGAATTACGCAAAAG
GTtcgtgaaagaaaaaaaagttatgaaaagTATACGACAAGAAATCGCAG
AAACTGCTTATAAAGAATGGCATATGAAAAACGACTTTATTTACAATCCG
TACGCATTTGGTCAGATTTTGTACGATAGAACCAATTTTCAGAAAAGCCC
AAGCACAAGAGCCACATCAGTAAGGTCAATTTCTCGGCAACGTTTAGATT
CAAAGACTCTTTTACAACGAGGAAAAATGACAAGAACTCGTGAATCACTC
ACACGAACGAATGACAGATCTGTCACTCTTCTACCCCTATCGGATTTTTA
TAAAACAATTTAATTCTTAAAATTCGAGCAAGTTCAGAAAGCAACTTTTT
AAGGACAACAACTATCGCTGTCCCATTTCATGAGGAagtaaaaaatcgaa
aaattattgtgaagattttaattatatttatGACGATAActttatcaaaa
ttatttctcACGGGTATAATAAAGAATATGAAGTAAACAAACAGGACACT
GGAAATCGAAAAGAGAGAATTTCTAATTCTACGAAATCTGCAGTGCCact
tttttgtgtgattgtgtATTGGATTGGATTTTGGCAAAAGAAAAAATCGt
gaaacaaaatatttgaaaatacaaaaaataatgaaaatattaaaagaaaa
cagagataaaatttatattagtCTTTTACTGTCAATTTAGTTCAGACCTG
TGTCAAAAGTTTGAATAGTTCGTTATTTAAGTTtgcaaaacaacaatttt
tccAATTCAACAAAGGTCTCGTAAATAATCATAACCATTTTTATCTAGTC
CCATATTCAggaatgtttcatttttcacgtttttgtaaaagtttttggaa
tAGTTCGAAAAACCAATTAATGATAACAGTGAATTTAAAATGCTCTCCTT
TATTGATAATTAAGAAGCCGTCTCTTGATTTCTCCACACAAAATTACAAG
CGGTTAAGGTAAGGTGCTTTAATCAAACAGAAAATCCGATATATTGGGCT
GCAAATATCGATATAATGGCCTGGCaatacatcttttcgaccgtagtcgc
gcggtcaggtcagtctttattatttaattatccccctaaacacaaacctt
tttctattgttaactggtgcgaaaaaaaagactgggacggttttaggatg
gtaaaacggacaaaaaaatgcccgcgcggtaattggcGGTTACagtcaaa
aaggtgtatataAAAACTCAACCCTCGAAAAAAAGGAAGGATTACATAAA
TTCTGTTCAGCTTTCTTACAGACACCACAGGATACAACACCTGTTTCGTG
CTCTGAATCGAAAACAGTCATTTGAGCGAATTATTGATtcttgaatttgt
ttttttttcgaatccACATTACTTTAACACTCTCAAGTGCCCAACAAAGG
GAGTCGTCAAAAAAATGGAGATTGACATTCAAAAAAAGACTTCTCCTGAA
TGCCCTTTACAAAGTTTTGACGAACAAAGTCATCGGGGCTGTCCTGTTCC
AGTGATGTGAAAAATTTACTAGCGGTTCAGGGGGACTTGGAGTTGAGAGA
AAAAGCGGGAGATTGGAACCCTTTTATCGTGGTTAAGCGATTGAAGTTTG
ATTAAAGCACCTAGACTGCGTTCGTAGCAGCCACGCAGCAACCTCCAATC
AACATACGTAGTACTGCGATCGAAATTGAAATCAAGCCGAGTCGAATCTA
ACAAAACTCGTATATTTCCAACACCATTCCTTCTCTTAACATCGTGTGCT
TTCAGCTTCGTTAACTATCATTAAATGAATATCAAGACATGGGCGTATCT
GTATTTCACGACACAATCCAGTggttaaaatgattttaatcgGGTTCGAC
TTTATTCATTTGATAACATTTGCTGCACAATCCATTCCAATCGGCTCGTC
CGAACATATCGCAATCCGGATTCCGACATTTTGTGGGAATTTGTTGAAAC
ATTGGTGCACTTTGAACTGGATTAGGGGGCGGTATCGCCATCATCATCGG
GTTACCGCCCATGGGTGGTTGTGATTGAAATCCTAAAGCTATCAAAAAGA
TATGTGAGTTATTTTGAGAATCGAGAAAAAAGGTCCCTGACCTGAGGTTA
CTTGGTGATAATCTTTAAGTTGCAGTCTTTCATAAATGGGACTGGAGTAA
TTTTTTCTTCGAAGAATGCATATATTTAAAGCTTTATTAAACAGTAAATT
AATTGACTTACTTTTTCGTTCGTTTTCATGTTTGGTGACTTCCAAGAAAC
ATCCGTGACAATAACCACCATACTCAAACGTCCCAACGAAATCACAATCA
AAACTTTTACACTTCTGCGCCTGTGGATGAAATCCTTCTTCTCCTCCTTG
GGGTTGCGGACTTGGCATCCCACCACCGGCGTATTGTTGCTGCGGAGGCG
GTGGCGGTGGAGCCCCCATACCGTAAGCTTGCGGAAAATTGGGGTACTGG
CCTTTGGAGCATCTGTCACATAGTGTTGTTGTCGGAACAGCGAATCCAGT
GCAACCTCTTGTCATACATGGCATCTG
Run BLAST on NCBI

transcript from alignment at sc0000492:135855..144314+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024429 ID=TCONS_00024429|Name=TCONS_00024429|organism=Clytia hemisphaerica|type=transcript|length=8460bp|location=Sequence derived from alignment at sc0000492:135855..144314+ (Clytia hemisphaerica)
GCTTTCATCTCAAAGATCGTGcgcttcaaaacaaaaacaaatcagAATCA GAACATCgacgaaaaaatatattttatttctttgattgATCCTTTTTCCA GTTTCTAACAATGTCTAGAAGAAGAATGTCAAATTCACAAGATGTCTTTA TAGCGTGTAGGGTTGGAGATGTAAGATGGCTTGAGAAAATCACAAGtaat gaaaaggaaaaacaagCAGCCCTTTCCACAAGAGACGGAAAGGTGAGTAG AAAAAAGGAAGAccttgcattgaagcgaagcTGCTGTCTCTGCCATACGA CAGAGATGAGAGGCCATGAGAGagtaaaatgttttgaaataaatGCCGAA TATACAGtacgaaagcagccggcgaggcgacctttttttctgatgtgttc tgagagcatatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAATAGTGCgctaaaggtt tcctagaaatcagaacacatcatttggataaaaaattgaaaggtcataac attttgtctcctagaagataagaacacatattttctaaaaaatcccttcg ccggctgcttctgacaGTAGtatcgaaagcagccggcgaggcgacctttt ttcctATGTGTTCTGctgagagcatatttcagctagaaattttgatctgt tgttCTGGTtagatcttcgaaaattaatcagctagaaataccGGAAAtaa aatgatgtgttctgaacgagacaggggtataatcaagaaaAGATTGGTAA CCCtataaattttcagaacacatctttcgtggagaaaaacaaattagtac gtttttttttatgtgttccgatttctaggaaacctttatcgcactacttg tctccctaaacttatcactactttatggtttgaCGTGTTCTAAAATCTGG GAAAACAAGTTTGCCGAGATAATCTTGTATTGTAAGATATTTAGTAGagt gaaatttgtaaaatcgctcgattttttttagTTAAAGCACTTGTTccttg ttatacattttggaAAGCGGTAGAGTGGGGGGGGGTATGTGTCAAAATAA CTTaggtgcaaattttttttcggacagtttgctgtgattttcggacaaat ttcggtctcaggcaaaaattatagggtcaaaaatttatgaaacttTTAGC TTGAGAAATCCGAACACagcatttgtataaaaaattgtgaaaggtcataa catttggtctcctagaagataagaacacatatttctaaaaaatctcttcg TTGGCTGCTTTTGTACAGTATGTAGTATCAATTAGTCGAGCTAGTACAAA ACATAATAGAAAAATATGTGACACTGGAGAAGTGCCGGAGTGCGCTGGAA TGATATTACAATATTTGTATTCGACCCCTTACCCTTCTCTTTTATAATAC AGGGATTTTTACCGATTCACATAGCCGCAATGGAATGCAAACTGGATGCA TTGAAATATCTGGTGGAGAAGCTTAGTTGCTGCATTGATTCAGCCACTCT ATCAGGATGGACTGCCTTACATTTCTCAAtcaataataacaaaaaaatgg aATCACTGAAGTGTATGGATTACTTGCTGATGAAAGGGGCTGACATTGAC AGGTGAGTTGATAGAATTTTGGTGAAGGACGTGAAGGGTAAAAAAAGACC CCAGTGGACCTTCAATTTACGCAATCGTGcaattttttccccaaattcac gcattcgagcacgcattcacgcagagctttccaattcacgcattcacgca attttttcttaattttcacgcattcacgcaagtgaaaaagccctcCCGCA TTCACACGAACCGCTGGGGGCCCAGTAAAAAGAAGTATCAGGTTCTGTTT ATAagacagttgacgctctcttaacTCGTTTTTCAACAAGGGGAATGAGA TTTTTATTACGTAAGAGAATATCGAAGGTACATAAGAGCTGCAGGAAAGG CAATTTAAANATTTCTCAAGCTAAaagtttcataaatttttgaccctata atttttgcctgagaccgaaatttgtccgaaaatcacagcaaactgtccga aaaaaaatttgcacctAAGTTATTTTGACACATACCCCCCCCCACTCTAC CGCTTtccaaaatgtataacaaggAACAAGTGCTTTAActaaaaaaaatc gagcgattttacaaatttcactCTACTAAATATCTTACAATACAAGATTA TCTCGGCAACCCTGTTTTCCCAGATTTTAGAACACGtcaaaccataaagt agtgataagtttagggagacaagtagtgcgataaaggtttcctagaaatc cgaACACagcatttgtataaaaaatagtgaaaggtcataacatttggtct cctagaagataagaacacatatttctaaaaaatctcttcgTTGGCTGCTT TTGTACAGCATGTAGTATCAATTAGTCGAGCTAGTACAAAACATAATAGA AAAATATGTGACACTGGAGAAGTGCCGGAGTGCGCTGGAATGATATTACA ATatttgttttcgaccccttgcCCTTCTCTTTTATAATACAGGGATTTTT ACCGATTCACATAGCCGCAATGGAATGCAAACTGGATGCATTGAAATATC TGGTGGAGAAGCTCAGTTGCTGCATTGATTCAGCCACTCTATCAGGATGG ACTGCCTTACATTTCTCAATCAATAATAGCAAAAAAATGGAATCACTGAA GTGTATGGATTACTTGCTGATGAAAGGGGCTGACATTGACAGGTGAGTTG ATAGAATTTTGGTGAAGGACGTGAAGGGTAAAAAAAGACCCCAGTGGACC TTCAATTTACGCAATCGTGcaattttttccccaaattcacgcattcgagc acgcattcacgcaaagctttccaattcacgcattcacgcaattttttctt aattttcacgcattcacgcaagtgaaaaagccctcCCGCATTCACACGAA CCGCTGGGGGCCCAGTAAAAAGAAGTATCAGGTTCTGTTTATAagacagt tgacgctctcttaacTCGTTTTTCAACAAGGGGAATGAGATTTTTATTAC GTAAGAGAATATCGAAGGTACATAAGAGCTGCAGGAAAGGTAATTTAAAC AAGAATTTCGATTGGTTGTTAAAGCTGTTGCGAAATgtgaataaaaaaag tatacaaataCTGTATATATATTTCGTACTCTGTCCTGTTCCTATATATA TGGCTTTATTATGCAAGCTAGCATCAACCAATGTCTAGGTAGATCGAGAT AAAAAAAGATCCTTTTATTCCCCGAACCCTGCAAGAAGGGATTGCCTCAA AGAAAGGGCTCATCTGAACGGtcagaacatcaaaatttaaagataTTATT GGCTTAAAATTAGAAGGGATAGCAAAGATTTAGTCAACAACCAAGTTTTG TTAAAAGACTGTCTCACTTTTTAATTTACCTGGCAATTTCtcagcatgtt tttatgctataTAAAAAAGCTActattcctttttttcttttataagaaca ttgaggctcaaaatcaccaaaaaataagaacaacttaagaaaAATGTTGG AGCCTGAAGTTACtttcaagcaatttagaggtCATAGTATGTAGTATAAA tgggtaaaagcctaaaatacctcaattacaccctataCATATATATAAGA ACGGGATAAGAACAATTCGAGGCTCgtcaaagtgtcaaaaaatagaacag ccgagcctcagcaaaattgtacctggttcttatgaaaacaattctttttt gaaagatattttcaaaaaaagatgaaagatttaaaaaagttgaattacga agaagaaaaatgaagatctgGTTATCAAATCATGATATcagatttttttt agaatacCTGAACCTTGTAATCTACCGTATtgcttcaaataaacgcccct tatTTAAGTTTCTCGATTTTAGGAGGGGGTGTTTATTAAATTACTTGAGT CTAAcgtcgaatatttagagcaTATCTACAGATTGATCAGCGTTTTAGTT AAATATCAGGATTTCAGTGCAAATTTCTTTGGGTCAGCGACTAAAATTGC ATCAAAACTGATAGGTTACAAAAAAgactttcttttcaattttaaacaaa acttGTATCAAAGTATTtaagtcacaagtttctaataaacgcccctcccc tagagcttttaggaggggcgtttattcgaaggggcgtttaaaagaattGG GGCGTTTATTTTTGGAAGTATTTTTCTCCTAACAGATTattgctttttaa aaatatagCATAAATNAATTCGAGGCTCGtcaaagtatcaaaaaatagaa cagccgagcctcagcaaaattttacctggttcttataaaaacaattcttt tttgaaagatattttcaaaaaaagataaaagatttaaaaaagttgaatta cgaagaagaaaaatgaagatctgGTTATCAAATCATGATATcagattttt tttagaatacCTGAACCTTGCAGGCCTTTAATctaccgtattacttcaaa taaacgcACGGGGCGTTTATTTAAGTTTCTCGATTTTAGGAGGGGGTGTT TATTAAATTACTTGAGTCTAAcgtcgaatatttagagcaTATCTACAGAT TGATCAGCGTTTTAGTTCTATACCAGGATTTCAGTGCAAATTTCTTTGGG TCAGCGACTAAAATTGCATCAAAACTGATAGGTTACAAAAAAGACTTTCT TTTCAATTCTAAACAAAACTTGTATCAAAGTATTTAAGTCACAAatttct aataaacgcccctcccctagagcttttaggaggggcgtttattcgaaggg gcATTTAAAAGAATTGGGGCGTTTATTTTTGGAAGTATTTTTCTCCTAAC AGTTTattgctttttaaaaatatagCATAAATGTAGTAAGCTGAGAAATT GTAAAAAGGTATCCACATACAGAGATTACATAATTCAATGATTCATCAAC TCTACTTTTAACCTCCAATTTACAGGCAAACAGATCATGGTATGAGTGCT CTACATCTTGCGAGTTCAATTGGGCACATAGAAGAAGTTAGACTACTTCT AAAACGAGGAGCCACGGTAGATCTCAAGGATACATCGAACAGGATGGCTT TCATTTATGCAACTTTATGGGGACATCAAAAAGTGGCTCGATTACTTGCG CATCAGATGTGGTTCAAACAGAAGAATGATAAGGAGTTATCGAGGCAAAC TTTTGATAAATATTCGAATGAATTACGCAAAAGGTtcgtgaaagaaaaaa aagttatgaaaagTATACGACAAGAAATCGCAGAAACTGCTTATAAAGAA TGGCATATGAAAAACGACTTTATTTACAATCCGTACGCATTTGGTCAGAT TTTGTACGATAGAACCAATTTTCAGAAAAGCCCAAGCACAAGAGCCACAT CAGTAAGGTCAATTTCTCGGCAACGTTTAGATTCAAAGACTCTTTTACAA CGAGGAAAAATGACAAGAACTCGTGAATCACTCACACGAACGAATGACAG ATCTGTCACTCTTCTACCCCTATCGGATTTTTATAAAACAATTTAATTCT TAAAATTCGAGCAAGTTCAGAAAGCAACTTTTTAAGGACAACAACTATCG CTGTCCCATTTCATGAGGAagtaaaaaatcgaaaaattattgtgaagatt ttaattatatttatGACGATAActttatcaaaattatttctcACGGGTAT AATAAAGAATATGAAGTAAACAAACAGGACACTGGAAATCGAAAAGAGAG AATTTCTAATTCTACGAAATCTGCAGTGCCacttttttgtgtgattgtgt ATTGGATTGGATTTTGGCAAAAGAAAAAATCGtgaaacaaaatatttgaa aatacaaaaaataatgaaaatattaaaagaaaacagagataaaatttata ttagtCTTTTACTGTCAATTTAGTTCAGACCTGTGTCAAAAGTTTGAATA GTTCGTTATTTAAGTTtgcaaaacaacaatttttccAATTCAACAAAGGT CTCGTAAATAATCATAACCATTTTTATCTAGTCCCATATTCAggaatgtt tcatttttcacgtttttgtaaaagtttttggaatAGTTCGAAAAACCAAT TAATGATAACAGTGAATTTAAAATGCTCTCCTTTATTGATAATTAAGAAG CCGTCTCTTGATTTCTCCACACAAAATTACAAGCGGTTAAGGTAAGGTGC TTTAATCAAACAGAAAATCCGATATATTGGGCTGCAAATATCGATATAAT GGCCTGGCaatacatcttttcgaccgtagtcgcgcggtcaggtcagtctt tattatttaattatccccctaaacacaaacctttttctattgttaactgg tgcgaaaaaaaagactgggacggttttaggatggtaaaacggacaaaaaa atgcccgcgcggtaattggcGGTTACagtcaaaaaggtgtatataAAAAC TCAACCCTCGAAAAAAAGGAAGGATTACATAAATTCTGTTCAGCTTTCTT ACAGACACCACAGGATACAACACCTGTTTCGTGCTCTGAATCGAAAACAG TCATTTGAGCGAATTATTGATtcttgaatttgtttttttttcgaatccAC ATTACTTTAACACTCTCAAGTGCCCAACAAAGGGAGTCGTCAAAAAAATG GAGATTGACATTCAAAAAAAGACTTCTCCTGAATGCCCTTTACAAAGTTT TGACGAACAAAGTCATCGGGGCTGTCCTGTTCCAGTGATGTGAAAAATTT ACTAGCGGTTCAGGGGGACTTGGAGTTGAGAGAAAAAGCGGGAGATTGGA ACCCTTTTATCGTGGTTAAGCGATTGAAGTTTGATTAAAGCACCTAGACT GCGTTCGTAGCAGCCACGCAGCAACCTCCAATCAACATACGTAGTACTGC GATCGAAATTGAAATCAAGCCGAGTCGAATCTAACAAAACTCGTATATTT CCAACACCATTCCTTCTCTTAACATCGTGTGCTTTCAGCTTCGTTAACTA TCATTAAATGAATATCAAGACATGGGCGTATCTGTATTTCACGACACAAT CCAGTggttaaaatgattttaatcgGGTTCGACTTTATTCATTTGATAAC ATTTGCTGCACAATCCATTCCAATCGGCTCGTCCGAACATATCGCAATCC GGATTCCGACATTTTGTGGGAATTTGTTGAAACATTGGTGCACTTTGAAC TGGATTAGGGGGCGGTATCGCCATCATCATCGGGTTACCGCCCATGGGTG GTTGTGATTGAAATCCTAAAGCTATCAAAAAGATATGTGAGTTATTTTGA GAATCGAGAAAAAAGGTCCCTGACCTGAGGTTACTTGGTGATAATCTTTA AGTTGCAGTCTTTCATAAATGGGACTGGAGTAATTTTTTCTTCGAAGAAT GCATATATTTAAAGCTTTATTAAACAGTAAATTAATTGACTTACTTTTTC GTTCGTTTTCATGTTTGGTGACTTCCAAGAAACATCCGTGACAATAACCA CCATACTCAAACGTCCCAACGAAATCACAATCAAAACTTTTACACTTCTG CGCCTGTGGATGAAATCCTTCTTCTCCTCCTTGGGGTTGCGGACTTGGCA TCCCACCACCGGCGTATTGTTGCTGCGGAGGCGGTGGCGGTGGAGCCCCC ATACCGTAAGCTTGCGGAAAATTGGGGTACTGGCCTTTGGAGCATCTGTC ACATAGTGTTGTTGTCGGAACAGCGAATCCAGTGCAACCTCTTGTCATAC ATGGCATCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013711XLOC_013711Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024429-exon-sc0000492-1491911889:135855..136096TCONS_00024429-exon-sc0000492-1491911889:135855..136096Clytia hemisphaericaexon
TCONS_00024429-exon-sc0000492-1510915933:135855..136096TCONS_00024429-exon-sc0000492-1510915933:135855..136096Clytia hemisphaericaexon
TCONS_00024429-exon-sc0000492-1575043694:135855..136096TCONS_00024429-exon-sc0000492-1575043694:135855..136096Clytia hemisphaericaexon
TCONS_00024429-exon-sc0000492-1491911889:139097..139296TCONS_00024429-exon-sc0000492-1491911889:139097..139296Clytia hemisphaericaexon
TCONS_00024429-exon-sc0000492-1510915933:139097..139296TCONS_00024429-exon-sc0000492-1510915933:139097..139296Clytia hemisphaericaexon
TCONS_00024429-exon-sc0000492-1575043694:139097..139296TCONS_00024429-exon-sc0000492-1575043694:139097..139296Clytia hemisphaericaexon
TCONS_00024429-exon-sc0000492-1491911889:141530..144314TCONS_00024429-exon-sc0000492-1491911889:141530..144314Clytia hemisphaericaexon
TCONS_00024429-exon-sc0000492-1510915933:141530..144314TCONS_00024429-exon-sc0000492-1510915933:141530..144314Clytia hemisphaericaexon
TCONS_00024429-exon-sc0000492-1575043694:141530..144314TCONS_00024429-exon-sc0000492-1575043694:141530..144314Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000492supercontigsc0000492:135855..144314 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.0348 1.60724 0.517667 0.274815 3.23708 1.86134 1.72766 1.29422 1.9513 2.36976 1.45359 1.89227 0.630761 0.595115 0.487845 0.381041 0.565864 0.550522 0.490338 0.433485 0.838327 0.762112 1.88058 1.0534 0.919437 1.21805 2.40038 2.84632 2.51064 1.78534
Blast
BLAST of TCONS_00024429 vs. Swiss-Prot (Human)
Match: ANR53 (Ankyrin repeat domain-containing protein 53 OS=Homo sapiens GN=ANKRD53 PE=1 SV=3)

HSP 1 Score: 103.219 bits (256), Expect = 1.487e-22
Identity = 60/167 (35.93%), Postives = 87/167 (52.10%), Query Frame = 3
Query:  147 FIACRVGDVRWLEKITSNEKEKQAALSTRDGKGFLPIHIAAMECKLDALKYLVEKLSCCIDSATLSGWTALHFSINNSKKMESLKCMDYLLMKGADIDRQTDHGMSALHLASSIGHIEEVRLLLKRGATVDLKDTSNRMAFIYATLWGHQKVARLLAHQMWFKQKND 647
              A  VG+V WL +   N+  ++      D KGF  IH AA   KL  L+ LVE+    +D  T +  T LH  I+      +L C+ YLL KGAD++ QT +G + LHLA+  G ++ V++L++ GA V  +D        +  +W H+  AR L   MW K K D
Sbjct:  112 LFAAAVGNVEWL-RFCLNQSLREIPT---DDKGFTAIHFAAQWGKLACLQVLVEEYKFPVDLLTNNSQTPLHLVIHRDNTTVALPCIYYLLEKGADLNAQTCNGSTPLHLAARDGLLDCVKVLVQSGANVHAQDAMGYKPIDFCKIWNHRACARFLKDAMWKKDKKD 274          
The following BLAST results are available for this feature:
BLAST of TCONS_00024429 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANR531.487e-2235.93Ankyrin repeat domain-containing protein 53 OS=Hom... [more]
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