TCONS_00024469 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024469
Unique NameTCONS_00024469
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2331

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024469 ID=TCONS_00024469|Name=TCONS_00024469|organism=Clytia hemisphaerica|type=transcript|length=2331bp
gtaaaatttaaGAAGTTAGACAAATAATTTCTCTATTTTCAGTGATAAAT
AAATCATACAAGACTAATACACAATAACGAAAACAATATCCAGTGCAGAA
GACCAACGATGGAGGTGAATTGCAAATCGAGATACCATTTGAAAATCTCC
ACCGATCAACGTGTCTATAAAGATTGGAAGAAAAATGGCGGAGGTCCTAT
TGAAATCAAATATGCTGACAactgcaaaaaatgtaaacgaCACAAAAAGA
ACCtgatcaaacaaaagaaaagGAAATACGATGTGTATAAGCACTCCTTG
CAAAACCAACCGCCTCCAGAATATCACAGCCGTAAAAACTCACTAAAAAT
GACCACATCCAAGAGTAGTGAGGATGGGGCCTTACACATCATGTCCATAC
CACGTGTTCCACCTCAAAAGGAATGGGACCCACGAATGACGATGACGTCA
CCAATTGAATGGGAAACAAGTCCTTTAGTTACGGCAGACGAGGAATCAGA
CATGTCGACAACAATTATCAACACCTCAACAAGACCAGATGTCTTGAtac
aaaacaaaggaaaacatCTACCTGACGTCATCAGCAATAATGAGGCACAA
AGACAAGAGGACGAAGAGACGGATCGGGAAAGCTCTATCAGAAGTTGTGC
AACTCACAAACCACGTGTCAAAAAATCTCGATCTGTAGATGTCGCAGAAC
GTAATGTGACCTCGACACCGAAAAAGTGCCGCTCTAGATCAATACCTACT
GACCAAAGTATCCCAAATAAATACACGAAAAGTAGCACAACTGATGAAAA
TGAACATTTTATTATTGTCAATATCCCTGAGAATGCATTTAAGCCAGGTA
TGCAAAATGCAGATATCCACAATCATAACACTATCCTCTCCATCGCAGAC
GATACAGCGACAGTGGTATCAGAAGGCGTAAAATGTAGATACTGCTTAAC
CAATGACACTATCAACAATGAACCTTTGATTTCACCATGTCATTGTTGTG
GAACTTCGAAGTTCGTCCACCAGAGCTGTTTGGAGAAATGGTNAAATGTA
GATACTGTTTAACCAATGACACTATCAACAATGAACCTTTGATTTCACCA
TGTCATTGTTGTGGAACTTCGAAGTTCGTCCACCAGAGCTGTTTGGAGAA
ATGGTTGACACTGCGGAATTTGGATCATTGCGAAGTCTGTAAAATGCATT
ATCGCACAAAATGGGTGCACCGCCCTCTTTGTTCGTTGAATTTTCCATCA
ATGAAGAAACACGACGTCTTCCTTCTCATCCTAACCGTCGCTTTCTACGT
CACTCTAATCTTCCAATTTCTCGGTGCCGTATACGTATCTATAATGGCGT
CAGCATTAACACCCATGGTTACCATAGTTACACTGATAGGACTGTCCTTA
GGGTTGATATGGTTTCTAACAGGTTCGATCGCACTGACGATTATTCTATA
CACTTCAGAATATTGGAAAGCATGGCGGAAAGCGAATAAACGAAAGATTC
TTCTGACGGAGAATGCGAGAGATATACCGTTAAAGTCTCCCACCAGCTCC
TTCCCGAGTGATTTATCCCAAGCTGTCGCCGTTTGAGATTTCAAAGTTGG
AGAAGATTTAAAGAGATCCAGGGTCCTTTCATGTTGTATATCAGcaataa
tagacgatatcggatttagataaatgcaatgcattctggtttctagggac
tctcaaaggaattataatctattataattgatctattataattccttatg
agagtccctagaaaccagaatgcattgcatttatctaaatccgatatcgt
ctattggatCACACAATGTTGTGAAAATGTCCAGGTTGGAAAAGTCCAAT
AGTTGGACCTGGAACACAAATGAAAAACAAGTCAGGGTGTATCCACCAAG
AAAACTTATAATGTGCTTCAGATGAAACTTTTATGATTCTGGCGATCACT
TACTCCTTCAGTGTGTCGAATCACCATCAGACACTGAAAAATATGTATTG
CCATACCACCTGATAACGGACATACTAGTAGATTTGTATAAAAACGGTTA
AGGCTCCGCATGACTACTACAATGAGACCTGAGGCATGTAAAAAGGAGct
gtgaaaaatttattttaggaTATCGATACTGGAGAAATATTTCCAGATTC
TGCTTATCACCGAAATGAACGTCATTGTGAATATATGattaaatttgttt
taatttattACAATTATGAAtagttttttaaaagattttattttcagtat
tttactGTTATTACGTTATTACAATTATTTATTTGACTCAAAAAGTTACT
CGCAGTTTATATACAGTTTCGAAAATAAGCC
Run BLAST on NCBI

protein sequence of TCONS_00024469-protein

>TCONS_00024469-protein ID=TCONS_00024469-protein|Name=TCONS_00024469-protein|organism=Clytia hemisphaerica|type=polypeptide|length=317bp
MEVNCKSRYHLKISTDQRVYKDWKKNGGGPIEIKYADNCKKCKRHKKNLI
KQKKRKYDVYKHSLQNQPPPEYHSRKNSLKMTTSKSSEDGALHIMSIPRV
PPQKEWDPRMTMTSPIEWETSPLVTADEESDMSTTIINTSTRPDVLIQNK
GKHLPDVISNNEAQRQEDEETDRESSIRSCATHKPRVKKSRSVDVAERNV
TSTPKKCRSRSIPTDQSIPNKYTKSSTTDENEHFIIVNIPENAFKPGMQN
ADIHNHNTILSIADDTATVVSEGVKCRYCLTNDTINNEPLISPCHCCGTS
KFVHQSCLEKWXNVDTV
Run BLAST on NCBI

transcript from alignment at sc0000499:162198..170818-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024469 ID=TCONS_00024469|Name=TCONS_00024469|organism=Clytia hemisphaerica|type=transcript|length=8621bp|location=Sequence derived from alignment at sc0000499:162198..170818- (Clytia hemisphaerica)
GTAAAATTTAAGAAGTTAGACAAATAATTTCTCTATTTTCAGTGATAAAT AAATCATACAAGACTAATACACAATAACGAAAACAATATCCAGTGCAGAA GACCAACGATGGAGGTGAATTGCAAATCGAGATACCATTTGAAAATCTCC ACCGATCAACGTGTCTATAAAGATTGGAAGAAAAATGGCGGAGGTCCTAT TGAAATCAAATATGCTGACAACTGCAAAAAATGTAAACGACACAAAAAGA ACCTGATCAAACAAAAGAAAAGGTGATGTCATTTAAGTGAATACCCCTGT CTCATTGATACTTTGGGAAATTTATACCCCGGGGTTTGATTAGAATGTAT ATACTGAATACGATTGTATTCGTTATTTGTTAAAGACGTCTCTGATTTAA ACGTTATAGCTCAAGGATCTTTTGACAATTGATTTTATTGGGAATAGGTT TCCTTTCAGTAATCAAACTGGCACGCAACATCGTTTTAACAACCGTAACG TTAGATGAACGTCAAAACGATTTGTGTCCAGAAGCATCTTCTTGGAAAGG GGATATAACTTTGATACATGGGTGTCTATAATCCTTTGAAGAGTGAGTAA AAAGTATTATTTTCTCCACAGAAGTTTAAAAAAAGGTCAAGATAGATTTG AAAATACTTTTATGAACTGCGAAACATCAACCATTCGCAAGGGGGTTAGA TTTCATTAAATTTGTTACATAACAAAGGTTTTAACTGTATTAGGAAGGAG GTCAAATGAGAAATTAATTGGTCTAAAAGGGCTTGAGGAAGAAGCGGGAA GAAGTCAATAAACCCAACTCCCTTTTCTCTGGAACAAATGGTTTGCCAAA ATAAAATACATAGGAAGGGGTCATTCGTCGTTCTTCTGCGGAATGTTTTA AGAGTAGTGTGCTATTTACGCAAGCGTATTGTAACCATCTTTCTAACAGT ATATAATTATAACATGTATCAACTTTAAATAATCTAGTGGCTTGTGAGAA CTTTATTGGAAATTGGTAACATTACTGCGTGCGAGACAGGGCTGTATGAA CATTTTGGGTCATGATCATTTGGGTTTAGCCTCAATGAGGGTATACTCCA ACCAAGTTACTAAAAAACTTCGGAGGAATGGGGTTTCAGTTTGAAGAACG ATAGGCCAGACAATTTGTCAAAACAAAATAGACAGGGATAATCTCTCAAT GACAGCTTTACAAACTGTCAACAGAACCAAAAGGTTGCATTAAATAAATA GATCGATTTCAACTGCCGACTGGGTAAGGAATCTGAGACTACCAAGATAA TTTTTGGCTTCAGCTATGATGGTCTAGTTAGGATAAATTTATTGGCAAAA TTGTAAGATAACTCTATTAATACAAAGGAAAGAAAAACTTTAAATATGTG AGTGTTGTAAAAATTGCTCAAAACTTTTTCTCATTCAGATCACAAATACG AGCAAAGACTCAGGTTATTTACTAGGGCAATTAATGAATATCTTTAAGGG ATAGTTGCATTTGAAGTTTATGTAGTTTTGAAGCTGATGCTTTTTCTTTC ACATAATCATATTTTTCTGATGTTGGTTGGGAAGTTTGTACGTGCTGCTC AGGGGATATATCAGAAAGTTGTATCAAACAACCAGAGTTCAAGGTCAGCC AAAACTTTTGAAAAAAAATATTCAACAAAAAGAAAAAATCGGAGGGTGGG TTATCAAAAGTTTGAATATACAAGGAATAGAAAACGAGACTTTTTTTGTA TTTTTTGAAGAGGAGAAGGAGAAGTTTTTGATGATTCCTGATTCGATACT TGGTTGAATGGAAATGTTGGTATCTAGTGCTCACTGGGGAGAAGATCCTG CATTGTAGAGATTTTCTTTGATGACAATTTTACGTAACGGATGACCTATC GCTCCTTCAAAGATAGAAATCGATATATTGTGTATGTTAAAAANGATGAC CTATCGCTCCTTCATAGATGGAAATCGATATATTGTGTATGTTAAAAAAA TCACACCGCAAATTTTCTCTCGTTCGTCCTATATCATGATGAAAACCGTG AGCTGACGTCTGCACTCAGACTTTTATATAGAAGGCGAGAATTTCTCACA CAAACGTATGAAATATATTTGAGATTGTTATCATCGGGGAGAAACTGAAG GAAGAGAGGAGAGGATTTGGTCAGTTTGATTGAGATGTCTGGTGCTCAGA TGCAAGGACCTTTTGAAACGTACTTTGTGGTGGACTGGGGCATACTGAAA GTGTTTGAACTGACACCAAAACAAAAAAGGTAAATATATGCAAAGAATTG GAATGCTATGATTTTAGTGTTTTCAAGAGGCAAGTCAGCAACTTACCCAA ATAAGCCACCGTATCATCACCGTCATCTGATTTCCTGGAAATAAAGAAAA AGAACATTGTCATTGTAGACCAGTAAGATTTTCTGAAAAACTTCCCATAC CATATTTGAAGCTAACAGAGGGAATAATAGCAATAGAAATACTACCCCTG CTCAAATTTGAAAGTAATCGGGTTTACGAGGTGCCTGGTGTGTGAACTGG AGTTTTTGAAATTTGACCTTTACAAAAAGTTTAAAATTATGACTGTCGAT GGTCGAAAAAGGGGAAGTTGCAGTAAAAAGGTTCAACTATTTAAATTCTA AATAGCTTATTTATCGTAGGTTTCTTCAACTTGATCGAAAACCCTTTTCT TTTTTGATCTCCTGTAAGACATTATCCATTATCGGTGAGTTCAAATCAAG CATCCAGTGTTGTTGCACTGTTACCAGTTTAACGCAGGAATTATTTTTGT TGGAATATCTAATGAATGAGATTTGTTTCATTCCAAAAGGGTGATCAATC AACAACTATTCTTTTTGAAAATCCTTTCAAATCGTCAGACAAAACCGTGT AAAAACCACAGCAGGCGGGGTCTGTTGATTGAAAATGATCTACGAATAGA TTTGCGTGTAATTTATTATGAACAGCCTGTACTATAAATGTTTCAGTGAA CATCTCAGACGCTTCTATTTTCACGATTTTGTTATTCATTTTCGACTCGT GATCAACACCAGAGCGATAGAATACACCTTTTCGACCGTAGCCGCCAATT GCCGCGCGGGCATTTTTTTGCCAGTTTTACCACCCTAAAACCGTTCTTTT TCACCTACAGACAATAGAAAAAAGTGTAAAAAAAGGATTGGATCGAGTTT AGGGTGTTACATTAAATAATAAAGAAGCACGCGCCTGACCGCGCGACTAT GGTCTAAAAGATGCATAGATTTCATAGAAAACTTTGATAATCATTTCGAC CGAGATTGGAGATCGTTCATACAAAGTCTAAAAAGCACCATATGATACTA TTTTTTTCAACCTCCGATTGCAGATTTCATAATTTCTGCACCATTAGCTT GCAATATTTGCTTTGGAGAGGGAGGGAGAGAAAAAGAGGGTGGGCAGTTA TCTTGACATTTTATCAATATTTTTGCAAAATTGTCTCCGGGGCGAGCCAT TCTATATTGATTGCTTTCACACCTTTGAAAAGTTTTTTTTTACCAGCTTT TATTTTGACATACCTATCTATAGCAAATCAAATTCGCATTAACTAAGCTA AAGAAAAATGCGCTGATTTCTTTTGGACCCTGGATTCTTTAAGACACGAG ATTCTCCTCGTAGTGCACAATTAGATCCTTGAACGAATTCCAGACGTTAA TATGATGAAGATGACAATCAAATATCCACTCATAGCTCTCTCTATCAATG ATTGACCATTTTATAAGTGTAAGGTAGTAGAGTTTCATTTTATGAGAGGT GAGAGATACTTGTTGTTTTTGTCTGAGATATGTGCCAAATCATCGGAAGC ACTATTTTGACAGGTTGTAGTGGTATTACAAGTCTCTTTTGTATGTAGGA GAAAAATTACATCAACTGAACATTTTTGCAAGGTTCAAACTTCTGACTTT TGACGTAGAGAGAGAGTTCAAATTTAAGCCAATACAAAGCGAGTTTTGTA AAAACTGCAGTCGCCAATTGACAGTTCTGAGTATTACTTGCCGAAAATAA ATAAATATTACTCAAAGCCCTTCATTTGATTGATATATTGGATGCATATC TTTTATGGTGCTATATCTCTAACGGATTATATCAGACGAATCTTTGAAAG AGGTAACAGCCAAGGAATATCCATCTAGGAACAAAGTCTTGGCCATTCTT AACAAAATGTGAGTGATTTTCAATGTAAAAATTTAGGTTTAAGGGGAAAT GTACAACGACAAGACACTAGGTTCGAGTTTACCTTGGGAAACCAAAATAT AGGACAAAAACTCTTGAACACTTCGTACACTAAGTACGTTGGCTTATTAT ATATCTGAAGCTGTTGAAAAAGGCTCCACTTTCGGAGGCAGAATTTACTT TTGATGTGACAAAACCAAGAAAGAAAAAGATTTTAGACGTTAGATGACAC TAACACTTCAATGTCTAACTCATCGCAATGATGACATCATCCTAATTTGT TGCACCGTTTTTTACTATTTGTCACTTTATTTTTTTCTTTATTTCCTTAA AAAGAGCTTTAAAGCCATGGCTGAGCTCCGGGTTAAGACTTACCATAACT GATTATATCACATTTAAAAAGCAGGTTTATCAAAATTGTGTGATATCAAT TCTCTCGTCCAACTGTTTGGCTTGGGCTGAGTGTAGTCAAGTATATGTTT GAAAGGGTCTGTCTATGTGCATAGGCCTTTTTTGAGGCTCTTTTGTTATA TTTTAGCACTTTGAAAATCGAATTGATCTTATTATGTTCTTAGAAGTTAT TTGCGTTATCTAAATAGTTTTTTGTTTATTAGTTCGCTTAGTTTGAGTTA TATCAACAAGACTTTTTTGGAATTTCCGAGGCTCGATATTCTAAAGTGTT CTGCCCATTCTTTTGCGTTTTTATGAATTCACGAAACCGTAAAAATGTCA CAAAACTGTAGAAGAGAGGCGTATCCAGAAATTATTTTTTGATGAGATTT TCTTCATTTTTTTGCCTGGTTTTTAGTTCATCTTCATTTTCTCTTTAAAA TTATTTTTCCTGTTTGAAAAGTTTCGCCTGAAAGTTTGATCACCTTTTCG ATTTAAGAGGATTATCGTACCAAAAACAATAAGGAAATTTTTTTGAGTAG TAAAGCATTTTCAAAAACTTTTTTGATGATCTAAGCAACCCATTATGTTC AAAAGGGGAATGAAGAAGGAAGAAATATATGATAGGTTTTATATTTCTGA ACGTGAGAGACTGAGAACCATAGATCAATAATTGAAAAGCGAAAAGTGAG GGGTTGATGGTTATCAGGGTTTTTTAAAACTTTTTGATAAACTGTTGAGC TCTTTTAAGACTTCTTCACGGGGCTTTATTTCATGCAAAGCTCCATAATA TAGCAACAATATAACTTTATGAAAATATTTGTGAGGGATTGAGAACATCT TTCGATATGAGAAACATGTCGGTCGAAAAAACCTCTGAATATGTTACATT GCAATGAAAGGAAACCAAAAAAGCTAGTTCTGTTCTGTTCTTTCACTTTA GTTAGTCTACAGTAAAGTGGTGAATAATCGATAATTTGAAAGCTTTAGGA TTTCCCTCCACTGGAATTGTTTTCTCTTTTTGGGAAGATTTTTGAATGCC GTAGCAACGATGTATCAAAGCACTATAATTATTACAGCAGTTTAATCATT TCGTTTAATTTCATTACTTCAGGAAATACGATGTGTATAAGCACTCCTTG CAAAACCAACCGCCTCCAGAATATCACAGCCGTAAAAACTCACTAAAAAT GACCACATCCAAGAGTAGTGAGGATGGGGCCTTACACATCATGTCCATAC CACGTGTTCCACCTCAAAAGGAATGGGACCCACGAATGACGATGACGTCA CCAATTGAATGGGAAACAAGTCCTTTAGTTACGGCAGACGAGGAATCAGA CATGTCGACAACAATTATCAAGTAAACATTTCTCGTCCTTAATTTCCTCT ACGTCTGGCTACAGGGGATTTTCATCCTTTCGATAACTTAATCTTCACTT GTATCCAGAGATACGACAGAATCTGTGAATTATTTTTTCTTGATTTCTGA ATAATTCTTTGGAAAACTTTGATGAAGTATATAAGAATCCAATAACAGAA CTAGGATAGACCTAGATAGGAAGAACATATTAAGAATACTTTCCAAATGT TATTATTCCATTTCACCAGCACCTCAACAAGACCAGATGTCTTGATACAA AACAAAGGAAAACATCTACCTGACGTCATCAGCAATAATGAGGCACAAAG ACAAGAGGACGAAGAGACGGATCGGGAAAGCTCTATCAGAAGTTGTGCAA CTCACAAACCACGTGTCAAAAAATCTCGATCTGTAGATGTCGCAGAACGT AATGTGACCTCGACACCGAAAAAGTGCCGCTCTAGATCAATACCTACTGA CCAAAGTATCCCAAATAAATACACGAAAAGTAGCACAACTGATGAAAATG AACATTTTATTATTGTCAATATCCCTGAGAATGCATTTAAGCCAGGTATG CAAAATGCAGATATCCACAATCATAACACTATCCTCTCCATCGCAGACGA TACAGCGACAGTGGTATCAGAAGGCGTAAAATGTAGATACTGCTTAACCA ATGACACTATCAACAATGAACCTTTGATTTCACCATGTCATTGTTGTGGA ACTTCGAAGTTCGTCCACCAGAGCTGTTTGGAGAAATGGTNAAATGTAGA TACTGTTTAACCAATGACACTATCAACAATGAACCTTTGATTTCACCATG TCATTGTTGTGGAACTTCGAAGTTCGTCCACCAGAGCTGTTTGGAGAAAT GGTTGACACTGCGGAATTTGGATCATTGCGAAGTCTGTAAAATGCATTAT CGCACAAAATGGGTGCACCGCCCTCTTTGTTCGGTAAGTTATGATATATT CAGTCTACATGAGGATTTGGTTGGCTATAGTCACCGCTGAGGTTCTTGTT TGTAGGTTTTTGTTCAATTTATAAAAAAAAGCCTCAATTTGAGGCGGGAA ACAGGGCTCGAGTTAGAAGAACTGAAAACAGTTATGTCAGACCGTGAGCT GTGGAGAGAGAGATACTCGGTATTTCCGACCTAACGGTCGAAGGAAGGAT GATGATGATAAAAAAAAGACACTTTTTTATTCTGCTTCTGGCAGTTTCAT GCCTTTTTGGTCTTTAGGCAGCTCAATCTTCAGATAACTCAAGAGTACAC TCTTTTACATCATTGTCAACGCCAGAATTCAAAAGTTCCTGGAAAACTTC CTTTCGATTCATATTATAACCTAGTCGACCGTGACGATGTAAAAACAATA GAGAGAATTATCTTAAATCGCTAGATAACTGAGACATCCATGCGAAATAT CGAAGCTTATCTATAGCTGTTACCTTTCCGAAGATATCAAAATCTCTATT TGTTTTATTATATATTCCAGTTGAACNCCTTTCCGAAAATATCAAAATCT CTATTTGTTTTATCATTTATTTCAGTTGAATTTTCCATCAATGAAGAAAC ACGACGTCTTCCTTCTCATCCTAACCGTCGCTTTCTACGTCACTCTAATC TTCCAATTTCTCGGTGCCGTATACGTATCTATAATGGCGTCAGCATTAAC ACCCATGGTTACCATAGTTACACTGATAGGACTGTCCTTAGGGTTGATAT GGTTTCTAACAGGTTCGATCGCACTGACGATTATTCTATACACTTCAGAA TATTGGAAAGCATGGCGGAAAGCGAATAAACGAAAGATTCTTCTGACGGA GAATGCGAGAGATATACCGTTAAAGTCTCCCACCAGCTCCTTCCCGAGTG ATTTATCCCAAGCTGTCGCCGTTTGAGATTTCAAAGTTGGAGAAGATTTA AAGAGATCCAGGGTCCTTTCATGTTGTATATCAGCAATAATAGACGATAT CGGATTTAGATAAATGCAATGCATTCTGGTTTCTAGGGACTCTCAAAGGA ATTATAATCTATTATAATTGATCTATTATAATTCCTTATGAGAGTCCCTA GAAACCAGAATGCATTGCATTTATCTAAATCCGATATCGTCTATTGGATC ACACAATGTTGTGAAAATGTCCAGGTTGGAAAAGTCCAATAGTTGGACCT GGAACACAAATGAAAAACAAGTCAGGGTGTATCCACCAAGAAAACTTATA ATGTGCTTCAGATGAAACTTTTATGATTCTGGCGATCACTTACTCCTTCA GTGTGTCGAATCACCATCAGACACTGAAAAATATGTATTGCCATACCACC TGATAACGGACATACTAGTAGATTTGTATAAAAACGGTTAAGGCTCCGCA TGACTACTACAATGAGACCTGAGGCATGTAAAAAGGAGCTGTGAAAAATT TATTTTAGGATATCGATACTGGAGAAATATTTCCAGATTCTGCTTATCAC CGAAATGAACGTCATTGTGAATATATGATTAAATTTGTTTTAATTTATTA CAATTATGAATAGTTTTTTAAAAGATTTTATTTTCAGTATTTTACTGTTA TTACGTTATTACAATTATTTATTTGACTCAAAAAGTTACTCGCAGTTTAT ATACAGTTTCGAAAATAAGCC

Coding sequence (CDS) from alignment at sc0000499:162198..170818-

>TCONS_00024469 ID=TCONS_00024469|Name=TCONS_00024469|organism=Clytia hemisphaerica|type=CDS|length=2862bp|location=Sequence derived from alignment at sc0000499:162198..170818- (Clytia hemisphaerica)
CACCTCAACAAGACCAGATGTCTTGATACAAAACAAAGGAAAACATCTAC
CTGACGTCATCAGCAATAATGAGGCACAAAGACAAGAGGACGAAGAGACG
GATCGGGAAAGCTCTATCAGAAGTTGTGCAACTCACAAACCACGTGTCAA
AAAATCTCGATCTGTAGATGTCGCAGAACGTAATGTGACCTCGACACCGA
AAAAGTGCCGCTCTAGATCAATACCTACTGACCAAAGTATCCCAAATAAA
TACACGAAAAGTAGCACAACTGATGAAAATGAACATTTTATTATTGTCAA
TATCCCTGAGAATGCATTTAAGCCAGGTATGCAAAATGCAGATATCCACA
ATCATAACACTATCCTCTCCATCGCAGACGATACAGCGACAGTGGTATCA
GAAGGCGTAAAATGTAGATACTGCTTAACCAATGACACTATCAACAATGA
ACCTTTGATTTCACCATGTCATTGTTGTGGAACTTCGAAGTTCGTCCACC
AGAGCTGTTTGGAGAAATGGTNAAATGTAGATACTGTTTAAGAAATACGA
TGTGTATAAGCACTCCTTGCAAAACCAACCGCCTCCAGAATATCACAGCC
GTAAAAACTCACTAAAAATGACCACATCCAAGAGTAGTGAGGATGGGGCC
TTACACATCATGTCCATACCACGTGTTCCACCTCAAAAGGAATGGGACCC
ACGAATGACGATGACGTCACCAATTGAATGGGAAACAAGTCCTTTAGTTA
CGGCAGACGAGGAATCAGACATGTCGACAACAATTATCAAATGGAGGTGA
ATTGCAAATCGAGATACCATTTGAAAATCTCCACCGATCAACGTGTCTAT
AAAGATTGGAAGAAAAATGGCGGAGGTCCTATTGAAATCAAATATGCTGA
CAACTGCAAAAAATGTAAACGACACAAAAAGAACCTGATCAAACAAAAGA
AAAGCACCTCAACAAGACCAGATGTCTTGATACAAAACAAAGGAAAACAT
CTACCTGACGTCATCAGCAATAATGAGGCACAAAGACAAGAGGACGAAGA
GACGGATCGGGAAAGCTCTATCAGAAGTTGTGCAACTCACAAACCACGTG
TCAAAAAATCTCGATCTGTAGATGTCGCAGAACGTAATGTGACCTCGACA
CCGAAAAAGTGCCGCTCTAGATCAATACCTACTGACCAAAGTATCCCAAA
TAAATACACGAAAAGTAGCACAACTGATGAAAATGAACATTTTATTATTG
TCAATATCCCTGAGAATGCATTTAAGCCAGGTATGCAAAATGCAGATATC
CACAATCATAACACTATCCTCTCCATCGCAGACGATACAGCGACAGTGGT
ATCAGAAGGCGTAAAATGTAGATACTGCTTAACCAATGACACTATCAACA
ATGAACCTTTGATTTCACCATGTCATTGTTGTGGAACTTCGAAGTTCGTC
CACCAGAGCTGTTTGGAGAAATGGTNAAATGTAGATACTGTTTAAGAAAT
ACGATGTGTATAAGCACTCCTTGCAAAACCAACCGCCTCCAGAATATCAC
AGCCGTAAAAACTCACTAAAAATGACCACATCCAAGAGTAGTGAGGATGG
GGCCTTACACATCATGTCCATACCACGTGTTCCACCTCAAAAGGAATGGG
ACCCACGAATGACGATGACGTCACCAATTGAATGGGAAACAAGTCCTTTA
GTTACGGCAGACGAGGAATCAGACATGTCGACAACAATTATCAAATGGAG
GTGAATTGCAAATCGAGATACCATTTGAAAATCTCCACCGATCAACGTGT
CTATAAAGATTGGAAGAAAAATGGCGGAGGTCCTATTGAAATCAAATATG
CTGACAACTGCAAAAAATGTAAACGACACAAAAAGAACCTGATCAAACAA
AAGAAAAGCACCTCAACAAGACCAGATGTCTTGATACAAAACAAAGGAAA
ACATCTACCTGACGTCATCAGCAATAATGAGGCACAAAGACAAGAGGACG
AAGAGACGGATCGGGAAAGCTCTATCAGAAGTTGTGCAACTCACAAACCA
CGTGTCAAAAAATCTCGATCTGTAGATGTCGCAGAACGTAATGTGACCTC
GACACCGAAAAAGTGCCGCTCTAGATCAATACCTACTGACCAAAGTATCC
CAAATAAATACACGAAAAGTAGCACAACTGATGAAAATGAACATTTTATT
ATTGTCAATATCCCTGAGAATGCATTTAAGCCAGGTATGCAAAATGCAGA
TATCCACAATCATAACACTATCCTCTCCATCGCAGACGATACAGCGACAG
TGGTATCAGAAGGCGTAAAATGTAGATACTGCTTAACCAATGACACTATC
AACAATGAACCTTTGATTTCACCATGTCATTGTTGTGGAACTTCGAAGTT
CGTCCACCAGAGCTGTTTGGAGAAATGGTNAAATGTAGATACTGTTTAAG
AAATACGATGTGTATAAGCACTCCTTGCAAAACCAACCGCCTCCAGAATA
TCACAGCCGTAAAAACTCACTAAAAATGACCACATCCAAGAGTAGTGAGG
ATGGGGCCTTACACATCATGTCCATACCACGTGTTCCACCTCAAAAGGAA
TGGGACCCACGAATGACGATGACGTCACCAATTGAATGGGAAACAAGTCC
TTTAGTTACGGCAGACGAGGAATCAGACATGTCGACAACAATTATCAAAT
GGAGGTGAATTGCAAATCGAGATACCATTTGAAAATCTCCACCGATCAAC
GTGTCTATAAAGATTGGAAGAAAAATGGCGGAGGTCCTATTGAAATCAAA
TATGCTGACAACTGCAAAAAATGTAAACGACACAAAAAGAACCTGATCAA
ACAAAAGAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013737XLOC_013737Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024469-proteinTCONS_00024469-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024469-exon-sc0000499-1575043694:170547..170818TCONS_00024469-exon-sc0000499-1575043694:170547..170818Clytia hemisphaericaexon
TCONS_00024469-exon-sc0000499-1575043694:164848..165096TCONS_00024469-exon-sc0000499-1575043694:164848..165096Clytia hemisphaericaexon
TCONS_00024469-exon-sc0000499-1575043694:163886..164599TCONS_00024469-exon-sc0000499-1575043694:163886..164599Clytia hemisphaericaexon
TCONS_00024469-exon-sc0000499-1575043694:162198..163293TCONS_00024469-exon-sc0000499-1575043694:162198..163293Clytia hemisphaericaexon
TCONS_00024469-exon-sc0000499-1510915933:170547..170818TCONS_00024469-exon-sc0000499-1510915933:170547..170818Clytia hemisphaericaexon
TCONS_00024469-exon-sc0000499-1510915933:164848..165096TCONS_00024469-exon-sc0000499-1510915933:164848..165096Clytia hemisphaericaexon
TCONS_00024469-exon-sc0000499-1510915933:163886..164599TCONS_00024469-exon-sc0000499-1510915933:163886..164599Clytia hemisphaericaexon
TCONS_00024469-exon-sc0000499-1510915933:162198..163293TCONS_00024469-exon-sc0000499-1510915933:162198..163293Clytia hemisphaericaexon
TCONS_00024469-exon-sc0000499-1491911889:170547..170818TCONS_00024469-exon-sc0000499-1491911889:170547..170818Clytia hemisphaericaexon
TCONS_00024469-exon-sc0000499-1491911889:164848..165096TCONS_00024469-exon-sc0000499-1491911889:164848..165096Clytia hemisphaericaexon
TCONS_00024469-exon-sc0000499-1491911889:163886..164599TCONS_00024469-exon-sc0000499-1491911889:163886..164599Clytia hemisphaericaexon
TCONS_00024469-exon-sc0000499-1491911889:162198..163293TCONS_00024469-exon-sc0000499-1491911889:162198..163293Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000499supercontigsc0000499:162198..170818 -
Expression

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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.526284 0.340131 0.180909 0 0.454012 0.553792 11.5998 10.8697 3.03263 5.69957 3.57437 2.3116 3.8004 3.24498 2.26794 2.77745 6.87209 7.92824 7.07624 7.39141 4.27062 4.16037 3.50393 3.7745 5.59327 5.64052 12.0752 11.1205 0.317023 0.206877
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011016Znf_RING-CH
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00024469 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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