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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024548 ID=TCONS_00024548|Name=TCONS_00024548|organism=Clytia hemisphaerica|type=transcript|length=310bp
TTTTAAGCAGTAAATGATCACTGCAATGATTAAAATAAGCACAAGCACAA
TTGCACCAATAATACAGGCGATTATGATTCCTTTATGCGATGGTTTTTTT
GTTGGTTTGACTGTTGGACCTGTCGCAGTTGTCGTAGGAGCGGCTGTAGT
CGTGGTCGTAGTAGGAGCGGCAGTTGTAGTGGTCGTAGTAGGGGCGGTCG
TTGTCGTGGTTGTAATAGGTGCCGCTGTTGTCGTGGTCGTGGTAGGTACC
GCTGTTGTCGTGGTCGTAGTAGGAGCGGCTGTTGTTGTGGTTGTAGTAGG
AGCGGTCGTT Run BLAST on NCBI transcript from alignment at sc0000502:120765..121689- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024548 ID=TCONS_00024548|Name=TCONS_00024548|organism=Clytia hemisphaerica|type=transcript|length=925bp|location=Sequence derived from alignment at sc0000502:120765..121689- (Clytia hemisphaerica)
TTTTAAGCAGTAAATGATCACTGCAATGATTAAAATAAGCACAAGCACAA
TTGCACCAATAATACAGGCGATTATGATTCCTTTATGCGATGGTTTTTTT
GTTGGTTTGACTGTTGGACCTGTCGCAGTTGTCGTAGGAGCGGCTGTAGT
CGTGGTCGTAGTAGGAGCGGCAGTTGTAGTGGTCGTAGTAGGGGCGGTCG
TTGTCGTGGTTGTAATAGGTGCCGCCGTTGTTGTGGTCGTAGTAGGGACA
GTCGTTGTAGTGGTTGTAGTAGGAGCGGTCGTTGTTGTGGTCGTAGTAGG
TGACGCTGTTGTCGTGGTCGTAGTTGGAGCGGATGTTGTTGTAGTCGTCG
TAGTAACGGCCGTTGTCGTGGTCGTAGTAGGAGCGGCCGTTGTTGTCGTA
GTTGGAGCAGCTATTGTCGTGGTCGTCGTAGGAGCGGTCGTTGTCGTGGT
CGTAGTTGGAGCGGCCATTGTTGTTGTCGTAGTAGGAGCGGCTGTTGTCG
TGGTCGTAGTTGGAGCGGATGTTGTTGTAGTCGTCGTAGTAACGGCCGTT
GTCGTGGTCGTAGTAGGAGCGGCCGTTGTTGTCGTAGTTGGAGCAGCTAT
TGTCGTGGTCGTCGTAGGAGCGGTCGTTGTCGTGGTCGTAGTTGGAGCGG
CCATTGTTGTTGTCGTAGTAGGAGCGGCTGTTGTCGTGGTCGTCTTAGGA
GCGGCTGTTGTCGTGGTCGTAGTAGGTGCCGCTGTTGTCGTGGTCGTGGT
AGGTGACGCTGTTGTCGTGGTCGTAGTTGGAGCGGCTGTTGTCGTGGTCG
TCGTAGGAGAGGCCGTTGTCGTGGTCGTAGTAAGAGCGGTAGTTGTAGTG
GTCGTAGCAGGTACCGCTGTTGTCGTGGTCGTAGTAGGAGCGGCTGTTGT
TGTGGTTGTAGTAGGAGCGGTCGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00024548-exon-sc0000502-1575043694:121472..121689 | TCONS_00024548-exon-sc0000502-1575043694:121472..121689 | Clytia hemisphaerica | exon |
| TCONS_00024548-exon-sc0000502-1575043694:120938..120964 | TCONS_00024548-exon-sc0000502-1575043694:120938..120964 | Clytia hemisphaerica | exon |
| TCONS_00024548-exon-sc0000502-1575043694:120765..120829 | TCONS_00024548-exon-sc0000502-1575043694:120765..120829 | Clytia hemisphaerica | exon |
| TCONS_00024548-exon-sc0000502-1510915933:121472..121689 | TCONS_00024548-exon-sc0000502-1510915933:121472..121689 | Clytia hemisphaerica | exon |
| TCONS_00024548-exon-sc0000502-1510915933:120938..120964 | TCONS_00024548-exon-sc0000502-1510915933:120938..120964 | Clytia hemisphaerica | exon |
| TCONS_00024548-exon-sc0000502-1510915933:120765..120829 | TCONS_00024548-exon-sc0000502-1510915933:120765..120829 | Clytia hemisphaerica | exon |
| TCONS_00024548-exon-sc0000502-1491911889:121472..121689 | TCONS_00024548-exon-sc0000502-1491911889:121472..121689 | Clytia hemisphaerica | exon |
| TCONS_00024548-exon-sc0000502-1491911889:120938..120964 | TCONS_00024548-exon-sc0000502-1491911889:120938..120964 | Clytia hemisphaerica | exon |
| TCONS_00024548-exon-sc0000502-1491911889:120765..120829 | TCONS_00024548-exon-sc0000502-1491911889:120765..120829 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000502 | supercontig | sc0000502:120765..121689 - |
Blast
The following BLAST results are available for this feature:
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