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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024628 ID=TCONS_00024628|Name=TCONS_00024628|organism=Clytia hemisphaerica|type=transcript|length=2434bp
TAAAAAAGTAAAAGCAAAGGAGATATTTTTGTTACTATGAGACCGTAATA
TAAATAAATCAACAGGACAGCCTAAAAGATCAGCAAACAACTTGATTTTG
CATTAAATGGGGTAAAAGTGAAGTGAGCATACGGCAGTGTTAGGGAACTG
TGTAGTGTTGCAGAATTTCTTTGTGCTAAAGTTTTAACAGAAGACATGTC
TGTACCCATGAGCAAATTGCCACCAAGGTATGCAGTCTCTGATTGGGTAA
CTTCAAACAAGTTGATATCGTTGAATGCAGAACGCATTCGTGATTCATCA
CACACAATACGACAAGATGCCCGAAAGCTCAGAAACGAAACTGAAAGTCA
CACAAAATGGACCCAGCATGAAAGTAATAcaaagattgaaaaaagaattg
atgATATAAATGAGTGGAAAGTTTCTCTTGAGAGATGCTTGGAAGAAACA
GATAAAGAGATTCAAGCTTTAcagaatgaaaagaaaaaccttGAAATAGC
TCTAGAGGCTAAGAAATTACCATTAGATGTAGCAATGGAGTGCTTACTTT
CACGAGAAGAAAGGGAAGGAATTGATTTAGTTCGGGATAATGTTGAACAC
CAACTTCACAAAGAAGTTGAAGGGATTGAGGGCATTAAAGCACTTTTGCA
ACAAAAGATTGCAGAATCATTTGAACAGCTTTGCTTACTAGAAGAAGCTC
GCCATCAAATTCATTGTGATCTAACAGATAAAAACCATGCCTTAGGAATA
GATGCAGAATGTCACAGTTTGTATAATAACTCTGATGGCatagattttca
aaataacccTACAAGAACTGTTAAAGGTAGTGTTACACCAGAAACATGGA
ATTCCTTCTCTGAATACAACAAAAATAGAGGAGAAGCTGAGATCAAAGCC
TCTCAACGGTTAAGAGAAGCAATCTTTGCAACATTGGAAAAGACAAGAAA
TGATTTAGATGCACAACATCGAGCAACAAACTATGAATATCGAAAGCGAA
TCCATGAAACAGATCAGGCTAAAAATGAGCTTGAATGGCAAAAGAAAAAT
acAGAAGATGAGGTAGCTACCATGGAACAGGATATTGTTGGCTTGAAAGA
ATCCATTGAAGCAAAAATGGGCCCAATGATGAGCAATCCAGACAGTACAA
CTCAGTCAGACAGAGATCACGAGGTTGCCCAGACCCGTCTTGAGAAACGG
ACTCAACGTAAAAGTGTGGAATTATGTCGAGATATTCCACAATATCAATT
ATGTTATGAAGTTGCTGAAATTGATGGCTCTGTCAGAGCATTGAGCGAGA
AACACCAAGTAGCTGTGACCGCTTTGAAAAGTTTGCTTCAAGATCTCAAC
CGTATCAATGAAGATTTGAGAATCAAGACAAAATCGTTGGCTCTTGATCA
ACATTGTATGGAAGTGCGTCAGAAATTGAGCGATCCTGCTGCCAATGTGA
CCacagatcaaaacaaagatcaattgGATGATCAAATCAAGAATCTCTCC
ATCGCCTCAAAACAACACGAAGCTCGACCTTCAAGTTTAAGAGATGAACG
ACAAACGTCTCATACTGGACGACAAACCACACTTGATCAAAGAAACGATT
CGATGCCACAGCAAAGCCAATTATCAAAATCAACCTATATCACTGATTTC
GACGAAACTAAAAACAAAAGATCGGGGGATTTACAACGCACTCTTGGTCA
AAGAAAAATCGTCGAATTTGCGTAAGACAAGTATGAATTAAAGGACTCTG
GCCATAGTATAATGTTCATGTGCAAAAATTAGATTTCTATCCGAATACTT
GTGaataaaacgttcgatttgtctggaaaatttctttgacAACACAATTT
CGAACGTCTTGTTCCATGATGGAAGATTAATTCACTAAATCCTGAAAGTG
CTCTATTTCTAAaaccgaaaaattgaaaatcacaatcaaattacacgctt
ttttataagaacacgaggctaaACTTCTTCCAAGCCCTAACCAGGCTCTG
ATTTGGGCAATGGCTGAAAAAAAGGGCTGATTTCAAGTCGTTTCAATAAG
TCAATAAGGGAACAGGATTTTGCCGACTAGCTTTATTTTGGCgagggaaa
atttttgtgagaactaattttggcgaacttTCAAGCACAAACATTATTCT
AAACTTACAACCGATTTTTAATTATGGGCAGAGAACTTTTAACAAATATA
ACTCAAGTATTTTATTTCTCATAATCTCTTATATTTTGTATATACACCAA
TTAtatgatttctaatttttttaaccACTAACTGATTAAACTTATGAAAT
ATATTTGACTACATCGTAAATTCACATAGAACCGAAAATCGATTTCCAGT
TTGGAATAATTGGAGCGATTAGTGTTGtcgaatatttcaataaatcaaga
ttttcaatgaaagtacgTCTATCCTTTGAAACCG Run BLAST on NCBI protein sequence of TCONS_00024628-protein >TCONS_00024628-protein ID=TCONS_00024628-protein|Name=TCONS_00024628-protein|organism=Clytia hemisphaerica|type=polypeptide|length=509bp
MSVPMSKLPPRYAVSDWVTSNKLISLNAERIRDSSHTIRQDARKLRNETE
SHTKWTQHESNTKIEKRIDDINEWKVSLERCLEETDKEIQALQNEKKNLE
IALEAKKLPLDVAMECLLSREEREGIDLVRDNVEHQLHKEVEGIEGIKAL
LQQKIAESFEQLCLLEEARHQIHCDLTDKNHALGIDAECHSLYNNSDGID
FQNNPTRTVKGSVTPETWNSFSEYNKNRGEAEIKASQRLREAIFATLEKT
RNDLDAQHRATNYEYRKRIHETDQAKNELEWQKKNTEDEVATMEQDIVGL
KESIEAKMGPMMSNPDSTTQSDRDHEVAQTRLEKRTQRKSVELCRDIPQY
QLCYEVAEIDGSVRALSEKHQVAVTALKSLLQDLNRINEDLRIKTKSLAL
DQHCMEVRQKLSDPAANVTTDQNKDQLDDQIKNLSIASKQHEARPSSLRD
ERQTSHTGRQTTLDQRNDSMPQQSQLSKSTYITDFDETKNKRSGDLQRTL
GQRKIVEFA Run BLAST on NCBI transcript from alignment at sc0000506:162810..166760+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024628 ID=TCONS_00024628|Name=TCONS_00024628|organism=Clytia hemisphaerica|type=transcript|length=3951bp|location=Sequence derived from alignment at sc0000506:162810..166760+ (Clytia hemisphaerica)
TAAAAAAGTAAAAGCAAAGGAGATATTTTTGTTACTATGAGACCGTAATA
TAAATAAATCAACAGGACAGCCTAAAAGATCAGCAAACAACTTGATTTTG
CATTAAATGGGGTAAAAGTGAAGTGAGCATACGGCAGTGTTAGGGAACTG
TGTAGTGTTGCAGAATTTCTTTGTGCTAAAGTTTTAACAGAAGACATGTC
TGTACCCATGAGCAAATTGCCACCAAGGTATGCAGTCTCTGATTGGGTAA
CTTCAAACAAGTTGATATCGTTGAATGCAGAACGCATTCGTGATTCATCA
CACACAATACGACAAGATGCCCGAAAGCTCAGAAACGAAACTGAAAGTCA
CACAAAATGGACCCAGCATGAAAGTAATAcaaagattgaaaaaagaattg
atgATATAAATGAGTGGAAAGTTTCTCTTGAGAGATGCTTGGAAGAAACA
GATAAAGAGATTCAAGCTTTAcagaatgaaaagaaaaaccttGAAATAGC
TCTAGAGGCTAAGAAATTACCATTAGATGTAGCAATGGAGTGCTTACTTT
CACGAGAAGAAAGGGAAGGAATTGATTTAGTTCGGGATAATGTTGAACAC
CAACTTCACAAAGAAGTTGAAGGGATTGAGGGCATTAAAGCACTTTTGCA
ACAAAAGATTGCAGAATCATTTGAACAGCTTTGCTTACTAGAAGAAGCTC
GCCATCAAATTCATTGTGATCTAACAGATAAAAACCATGCCTTAGGAATA
GATGCAGAATGTCACAGTTTGTATAATAACTCTGATGGCatagattttca
aaataacccTACAAGAACTGTTAAAGGTAGTGTTACACCAGAAACATGGA
ATTCCTTCTCTGAATACAACAAAAATAGAGGAGAAGCTGAGATCAAAGCC
TCTCAACGGTTAAGAGAAGCAATCTTTGCAACATTGGAAAAGACAAGAAA
TGATTTAGATGCACAACATCGAGCAACAAACTATGAATATCGAAAGCGAA
TCCATGAAACAGATCAGGCTAAAAATGAGCTTGAATGGCAAAAGAAAAAT
GTAAGAATTTTGATAttagaaaataatgaaataatgattatgttttggcc
aatttgaagaagaaattttatttgcaTACATAAATAAGgtattaaattta
aattttaatgtaacatttaagtgatttttttttacttttcagacAGAAGA
TGAGGTAGCTACCATGGAACAGGATATTGTTGGCTTGAAAGAATCCATTG
AAGCAAAAATGGGCCCAATGATGGTAAGAGTAGATTGGCATATATTCTGG
GCAATTTCTtgagtttaatttttttaatgaaaatattacCAGCAACTGAG
GTCACGCAAAAATGGTGCAAACaatcaaaaccacttttaataaaaaatat
ctATATACCAAGATATAATCATCAACTGCCTAGGGGGGTCAGTTTTTGGG
TAAATTGGTACTAAAATTAGcgattttcttaatttttagaatctttttca
aaattgtttgtgttttttttccGAATTTCTGcaatcttttagaaaaaatt
aaaatgatctagtttaaagaaaatttcccaagttcaaatatttttgcata
tacAGTCAAAAGTCTTTAATGTTTGTTTCATTAATAAATCAGCATTGTTT
AAAAGTAttagtttttgtaaaaaacgtgTCTAAATTTCCCTAAAAGTTTT
AGTACATATGTGTACTAAACTACCACTTTTCTAAAATGGGGTGGTGGTAT
TGTCGAAAACTCTTTTCATATTGTGTTtaagattttagtaccgactcCTC
CCTGCAACCGGGTCTTTCTAAATTATTTACCTAATGTTCCCTGTAACATT
TAAGGTcccatacatgtttttttatacaaGCATTGCGCTTATAAACATta
tctattttgaaatttctctaaaattttgcttagAGTGTTTATTGTTTTTA
CTCTCCTCTTTCTTTAGAGCAATCCAGACAGTACAACTCAGTCAGACAGA
GATCACGAGGTTTGTTTATTTGCAAAGTGTAGAGGGTAACTGTTTGAAAG
GATCTCAGATTATTATGTAGATTATGAAATTTTTAGTCTGTATAAGAGCA
AGTTTAGATGAAGATAATGATTGTTTTATTGGTGTTTTAGTGTGTTGGTA
TATAATCATGAATAAGAATTTAGAATTAGAGCATACCATAATCATTATAT
TAGTGTTAGTtcaatcggattaattttcgcaaaatcaaatttcgcgacat
cttaaatttttgcctttttacGCAAAGATAAATCATTGCGTATGATTGCT
GACTTGTAATCATGCATGTAGATCCGTGTTAAGTTCTACAAATCTCCATT
TCGAGAAAGCTGCCGTTTTGAGTGATATTTATTGCTGATTATTTGTGTTG
TTGATATTTATTTGAACATTTGGTATTTGTTCAttcgcaaaaattttaaa
atcccaaaaaaacttttttttggctCACGAAATTTAACCTTGCTAAAATC
GATCCGATAAAAGTAAGCTTGATACATATTCTAAAGAAAGATTTAGTTTG
ATCTACCCTCCCCATAGCTTTTTCTACACTAAATAATCGAGACTAATTTC
CTATAAACTAACATACAAAATCTATAAGTCATATTATATGCTATACCATT
TTTCGATGTTATTAATTTGAATTTGCCCTATTTTCTCAAGGTTGCCCAGA
CCCGTCTTGAGAAACGGACTCAACGTAAAAGTGTGGAATTATGTCGAGAT
ATTCCACAATATCAATTATGTTATGAAGTTGCTGAAATTGATGGCTCTGT
CAGAGCATTGAGCGAGAAACACCAAGTAGCTGTGACCGCTTTGAAAAGTT
TGCTTCAAGATCTCAACCGTATCAATGAAGATTTGAGAATCAAGACAAAA
TCGTTGGCTCTTGATCAACATTGTATGGAAGTGCGTCAGAAATTGAGCGA
TCCTGCTGCCAATGTGACCacagatcaaaacaaagatcaattgGATGATC
AAATCAAGAATCTCTCCATCGCCTCAAAACAACACGAAGCTCGACCTTCA
AGTTTAAGAGATGAACGACAAACGTCTCATACTGGACGACAAACCACACT
TGATCAAAGAAACGATTCGATGCCACAGCAAAGCCAATTATCAAAATCAA
CCTATATCACTGATTTCGACGAAACTAAAAACAAAAGATCGGGGGATTTA
CAACGCACTCTTGGTCAAAGAAAAATCGTCGAATTTGCGTAAGACAAGTA
TGAATTAAAGGACTCTGGCCATAGTATAATGTTCATGTGCAAAAATTAGA
TTTCTATCCGAATACTTGTGaataaaacgttcgatttgtctggaaaattt
ctttgacAACACAATTTCGAACGTCTTGTTCCATGATGGAAGATTAATTC
ACTAAATCCTGAAAGTGCTCTATTTCTAAaaccgaaaaattgaaaatcac
aatcaaattacacgcttttttataagaacacgaggctaaACTTCTTCCAA
GCCCTAACCAGGCTCTGATTTGGGCAATGGCTGAAAAAAAGGGCTGATTT
CAAGTCGTTTCAATAAGTCAATAAGGGAACAGGATTTTGCCGACTAGCTT
TATTTTGGCgagggaaaatttttgtgagaactaattttggcgaacttTCA
AGCACAAACATTATTCTAAACTTACAACCGATTTTTAATTATGGGCAGAG
AACTTTTAACAAATATAACTCAAGTATTTTATTTCTCATAATCTCTTATA
TTTTGTATATACACCAATTAtatgatttctaatttttttaaccACTAACT
GATTAAACTTATGAAATATATTTGACTACATCGTAAATTCACATAGAACC
GAAAATCGATTTCCAGTTTGGAATAATTGGAGCGATTAGTGTTGtcgaat
atttcaataaatcaagattttcaatgaaagtacgTCTATCCTTTGAAACC
G Coding sequence (CDS) from alignment at sc0000506:162810..166760+ >TCONS_00024628 ID=TCONS_00024628|Name=TCONS_00024628|organism=Clytia hemisphaerica|type=CDS|length=6120bp|location=Sequence derived from alignment at sc0000506:162810..166760+ (Clytia hemisphaerica)
ATGTCTGTACCCATGAGCAAATTGCCACCAAGGTATGCAGTCTCTGATTG
GGTAACTTCAAACAAGTTGATATCGTTGAATGCAGAACGCATTCGTGATT
CATCACACACAATACGACAAGATGCCCGAAAGCTCAGAAACGAAACTGAA
AGTCACACAAAATGGACCCAGCATGAAAGTAATAcaaagattgaaaaaag
aattgatgATATAAATGAGTGGAAAGTTTCTCTTGAGAGATGCTTGGAAG
AAACAGATAAAGAGATTCAAGCTTTAcagaatgaaaagaaaaaccttGAA
ATAGCTCTAGAGGCTAAGAAATTACCATTAGATGTAGCAATGGAGTGCTT
ACTTTCACGAGAAGAAAGGGAAGGAATTGATTTAGTTCGGGATAATGTTG
AACACCAACTTCACAAAGAAGTTGAAGGGATTGAGGGCATTAAAGCACTT
TTGCAACAAAAGATTGCAGAATCATTTGAACAGCTTTGCTTACTAGAAGA
AGCTCGCCATCAAATTCATTGTGATCTAACAGATAAAAACCATGCCTTAG
GAATAGATGCAGAATGTCACAGTTTGTATAATAACTCTGATGGCatagat
tttcaaaataacccTACAAGAACTGTTAAAGGTAGTGTTACACCAGAAAC
ATGGAATTCCTTCTCTGAATACAACAAAAATAGAGGAGAAGCTGAGATCA
AAGCCTCTCAACGGTTAAGAGAAGCAATCTTTGCAACATTGGAAAAGACA
AGAAATGATTTAGATGCACAACATCGAGCAACAAACTATGAATATCGAAA
GCGAATCCATGAAACAGATCAGGCTAAAAATGAGCTTGAATGGCAAAAGA
AAAATacAGAAGATGAGGTAGCTACCATGGAACAGGATATTGTTGGCTTG
AAAGAATCCATTGAAGCAAAAATGGGCCCAATGATGAGCAATCCAGACAG
TACAACTCAGTCAGACAGAGATCACGAGGTTGCCCAGACCCGTCTTGAGA
AACGGACTCAACGTAAAAGTGTGGAATTATGTCGAGATATTCCACAATAT
CAATTATGTTATGAAGTTGCTGAAATTGATGGCTCTGTCAGAGCATTGAG
CGAGAAACACCAAGTAGCTGTGACCGCTTTGAAAAGTTTGCTTCAAGATC
TCAACCGTATCAATGAAGATTTGAGAATCAAGACAAAATCGTTGGCTCTT
GATCAACATTGTATGGAAGTGCGTCAGAAATTGAGCGATCCTGCTGCCAA
TGTGACCacagatcaaaacaaagatcaattgGATGATCAAATCAAGAATC
TCTCCATCGCCTCAAAACAACACGAAGCTCGACCTTCAAGTTTAAGAGAT
GAACGACAAACGTCTCATACTGGACGACAAACCACACTTGATCAAAGAAA
CGATTCGATGCCACAGCAAAGCCAATTATCAAAATCAACCTATATCACTG
ATTTCGACGAAACTAAAAACAAAAGATCGGGGGATTTACAACGCACTCTT
GGTCAAAGAAAAATCGTCGAATTTGCGTAAATGTCTGTACCCATGAGCAA
ATTGCCACCAAGGTATGCAGTCTCTGATTGGGTAACTTCAAACAAGTTGA
TATCGTTGAATGCAGAACGCATTCGTGATTCATCACACACAATACGACAA
GATGCCCGAAAGCTCAGAAACGAAACTGAAAGTCACACAAAATGGACCCA
GCATGAAAGTAATAcaaagattgaaaaaagaattgatgATATAAATGAGT
GGAAAGTTTCTCTTGAGAGATGCTTGGAAGAAACAGATAAAGAGATTCAA
GCTTTAcagaatgaaaagaaaaaccttGAAATAGCTCTAGAGGCTAAGAA
ATTACCATTAGATGTAGCAATGGAGTGCTTACTTTCACGAGAAGAAAGGG
AAGGAATTGATTTAGTTCGGGATAATGTTGAACACCAACTTCACAAAGAA
GTTGAAGGGATTGAGGGCATTAAAGCACTTTTGCAACAAAAGATTGCAGA
ATCATTTGAACAGCTTTGCTTACTAGAAGAAGCTCGCCATCAAATTCATT
GTGATCTAACAGATAAAAACCATGCCTTAGGAATAGATGCAGAATGTCAC
AGTTTGTATAATAACTCTGATGGCatagattttcaaaataacccTACAAG
AACTGTTAAAGGTAGTGTTACACCAGAAACATGGAATTCCTTCTCTGAAT
ACAACAAAAATAGAGGAGAAGCTGAGATCAAAGCCTCTCAACGGTTAAGA
GAAGCAATCTTTGCAACATTGGAAAAGACAAGAAATGATTTAGATGCACA
ACATCGAGCAACAAACTATGAATATCGAAAGCGAATCCATGAAACAGATC
AGGCTAAAAATGAGCTTGAATGGCAAAAGAAAAATacAGAAGATGAGGTA
GCTACCATGGAACAGGATATTGTTGGCTTGAAAGAATCCATTGAAGCAAA
AATGGGCCCAATGATGAGCAATCCAGACAGTACAACTCAGTCAGACAGAG
ATCACGAGGTTGCCCAGACCCGTCTTGAGAAACGGACTCAACGTAAAAGT
GTGGAATTATGTCGAGATATTCCACAATATCAATTATGTTATGAAGTTGC
TGAAATTGATGGCTCTGTCAGAGCATTGAGCGAGAAACACCAAGTAGCTG
TGACCGCTTTGAAAAGTTTGCTTCAAGATCTCAACCGTATCAATGAAGAT
TTGAGAATCAAGACAAAATCGTTGGCTCTTGATCAACATTGTATGGAAGT
GCGTCAGAAATTGAGCGATCCTGCTGCCAATGTGACCacagatcaaaaca
aagatcaattgGATGATCAAATCAAGAATCTCTCCATCGCCTCAAAACAA
CACGAAGCTCGACCTTCAAGTTTAAGAGATGAACGACAAACGTCTCATAC
TGGACGACAAACCACACTTGATCAAAGAAACGATTCGATGCCACAGCAAA
GCCAATTATCAAAATCAACCTATATCACTGATTTCGACGAAACTAAAAAC
AAAAGATCGGGGGATTTACAACGCACTCTTGGTCAAAGAAAAATCGTCGA
ATTTGCGTAAATGTCTGTACCCATGAGCAAATTGCCACCAAGGTATGCAG
TCTCTGATTGGGTAACTTCAAACAAGTTGATATCGTTGAATGCAGAACGC
ATTCGTGATTCATCACACACAATACGACAAGATGCCCGAAAGCTCAGAAA
CGAAACTGAAAGTCACACAAAATGGACCCAGCATGAAAGTAATAcaaaga
ttgaaaaaagaattgatgATATAAATGAGTGGAAAGTTTCTCTTGAGAGA
TGCTTGGAAGAAACAGATAAAGAGATTCAAGCTTTAcagaatgaaaagaa
aaaccttGAAATAGCTCTAGAGGCTAAGAAATTACCATTAGATGTAGCAA
TGGAGTGCTTACTTTCACGAGAAGAAAGGGAAGGAATTGATTTAGTTCGG
GATAATGTTGAACACCAACTTCACAAAGAAGTTGAAGGGATTGAGGGCAT
TAAAGCACTTTTGCAACAAAAGATTGCAGAATCATTTGAACAGCTTTGCT
TACTAGAAGAAGCTCGCCATCAAATTCATTGTGATCTAACAGATAAAAAC
CATGCCTTAGGAATAGATGCAGAATGTCACAGTTTGTATAATAACTCTGA
TGGCatagattttcaaaataacccTACAAGAACTGTTAAAGGTAGTGTTA
CACCAGAAACATGGAATTCCTTCTCTGAATACAACAAAAATAGAGGAGAA
GCTGAGATCAAAGCCTCTCAACGGTTAAGAGAAGCAATCTTTGCAACATT
GGAAAAGACAAGAAATGATTTAGATGCACAACATCGAGCAACAAACTATG
AATATCGAAAGCGAATCCATGAAACAGATCAGGCTAAAAATGAGCTTGAA
TGGCAAAAGAAAAATacAGAAGATGAGGTAGCTACCATGGAACAGGATAT
TGTTGGCTTGAAAGAATCCATTGAAGCAAAAATGGGCCCAATGATGAGCA
ATCCAGACAGTACAACTCAGTCAGACAGAGATCACGAGGTTGCCCAGACC
CGTCTTGAGAAACGGACTCAACGTAAAAGTGTGGAATTATGTCGAGATAT
TCCACAATATCAATTATGTTATGAAGTTGCTGAAATTGATGGCTCTGTCA
GAGCATTGAGCGAGAAACACCAAGTAGCTGTGACCGCTTTGAAAAGTTTG
CTTCAAGATCTCAACCGTATCAATGAAGATTTGAGAATCAAGACAAAATC
GTTGGCTCTTGATCAACATTGTATGGAAGTGCGTCAGAAATTGAGCGATC
CTGCTGCCAATGTGACCacagatcaaaacaaagatcaattgGATGATCAA
ATCAAGAATCTCTCCATCGCCTCAAAACAACACGAAGCTCGACCTTCAAG
TTTAAGAGATGAACGACAAACGTCTCATACTGGACGACAAACCACACTTG
ATCAAAGAAACGATTCGATGCCACAGCAAAGCCAATTATCAAAATCAACC
TATATCACTGATTTCGACGAAACTAAAAACAAAAGATCGGGGGATTTACA
ACGCACTCTTGGTCAAAGAAAAATCGTCGAATTTGCGTAAATGTCTGTAC
CCATGAGCAAATTGCCACCAAGGTATGCAGTCTCTGATTGGGTAACTTCA
AACAAGTTGATATCGTTGAATGCAGAACGCATTCGTGATTCATCACACAC
AATACGACAAGATGCCCGAAAGCTCAGAAACGAAACTGAAAGTCACACAA
AATGGACCCAGCATGAAAGTAATAcaaagattgaaaaaagaattgatgAT
ATAAATGAGTGGAAAGTTTCTCTTGAGAGATGCTTGGAAGAAACAGATAA
AGAGATTCAAGCTTTAcagaatgaaaagaaaaaccttGAAATAGCTCTAG
AGGCTAAGAAATTACCATTAGATGTAGCAATGGAGTGCTTACTTTCACGA
GAAGAAAGGGAAGGAATTGATTTAGTTCGGGATAATGTTGAACACCAACT
TCACAAAGAAGTTGAAGGGATTGAGGGCATTAAAGCACTTTTGCAACAAA
AGATTGCAGAATCATTTGAACAGCTTTGCTTACTAGAAGAAGCTCGCCAT
CAAATTCATTGTGATCTAACAGATAAAAACCATGCCTTAGGAATAGATGC
AGAATGTCACAGTTTGTATAATAACTCTGATGGCatagattttcaaaata
acccTACAAGAACTGTTAAAGGTAGTGTTACACCAGAAACATGGAATTCC
TTCTCTGAATACAACAAAAATAGAGGAGAAGCTGAGATCAAAGCCTCTCA
ACGGTTAAGAGAAGCAATCTTTGCAACATTGGAAAAGACAAGAAATGATT
TAGATGCACAACATCGAGCAACAAACTATGAATATCGAAAGCGAATCCAT
GAAACAGATCAGGCTAAAAATGAGCTTGAATGGCAAAAGAAAAATacAGA
AGATGAGGTAGCTACCATGGAACAGGATATTGTTGGCTTGAAAGAATCCA
TTGAAGCAAAAATGGGCCCAATGATGAGCAATCCAGACAGTACAACTCAG
TCAGACAGAGATCACGAGGTTGCCCAGACCCGTCTTGAGAAACGGACTCA
ACGTAAAAGTGTGGAATTATGTCGAGATATTCCACAATATCAATTATGTT
ATGAAGTTGCTGAAATTGATGGCTCTGTCAGAGCATTGAGCGAGAAACAC
CAAGTAGCTGTGACCGCTTTGAAAAGTTTGCTTCAAGATCTCAACCGTAT
CAATGAAGATTTGAGAATCAAGACAAAATCGTTGGCTCTTGATCAACATT
GTATGGAAGTGCGTCAGAAATTGAGCGATCCTGCTGCCAATGTGACCaca
gatcaaaacaaagatcaattgGATGATCAAATCAAGAATCTCTCCATCGC
CTCAAAACAACACGAAGCTCGACCTTCAAGTTTAAGAGATGAACGACAAA
CGTCTCATACTGGACGACAAACCACACTTGATCAAAGAAACGATTCGATG
CCACAGCAAAGCCAATTATCAAAATCAACCTATATCACTGATTTCGACGA
AACTAAAAACAAAAGATCGGGGGATTTACAACGCACTCTTGGTCAAAGAA
AAATCGTCGAATTTGCGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00024628-exon-sc0000506-1491911889:162810..163859 | TCONS_00024628-exon-sc0000506-1491911889:162810..163859 | Clytia hemisphaerica | exon |
| TCONS_00024628-exon-sc0000506-1510915933:162810..163859 | TCONS_00024628-exon-sc0000506-1510915933:162810..163859 | Clytia hemisphaerica | exon |
| TCONS_00024628-exon-sc0000506-1575043694:162810..163859 | TCONS_00024628-exon-sc0000506-1575043694:162810..163859 | Clytia hemisphaerica | exon |
| TCONS_00024628-exon-sc0000506-1491911889:164002..164082 | TCONS_00024628-exon-sc0000506-1491911889:164002..164082 | Clytia hemisphaerica | exon |
| TCONS_00024628-exon-sc0000506-1510915933:164002..164082 | TCONS_00024628-exon-sc0000506-1510915933:164002..164082 | Clytia hemisphaerica | exon |
| TCONS_00024628-exon-sc0000506-1575043694:164002..164082 | TCONS_00024628-exon-sc0000506-1575043694:164002..164082 | Clytia hemisphaerica | exon |
| TCONS_00024628-exon-sc0000506-1491911889:164777..164818 | TCONS_00024628-exon-sc0000506-1491911889:164777..164818 | Clytia hemisphaerica | exon |
| TCONS_00024628-exon-sc0000506-1510915933:164777..164818 | TCONS_00024628-exon-sc0000506-1510915933:164777..164818 | Clytia hemisphaerica | exon |
| TCONS_00024628-exon-sc0000506-1575043694:164777..164818 | TCONS_00024628-exon-sc0000506-1575043694:164777..164818 | Clytia hemisphaerica | exon |
| TCONS_00024628-exon-sc0000506-1491911889:165500..166760 | TCONS_00024628-exon-sc0000506-1491911889:165500..166760 | Clytia hemisphaerica | exon |
| TCONS_00024628-exon-sc0000506-1510915933:165500..166760 | TCONS_00024628-exon-sc0000506-1510915933:165500..166760 | Clytia hemisphaerica | exon |
| TCONS_00024628-exon-sc0000506-1575043694:165500..166760 | TCONS_00024628-exon-sc0000506-1575043694:165500..166760 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000506 | supercontig | sc0000506:162810..166760 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR000435 | Tektin |
Blast
BLAST of TCONS_00024628 vs. Swiss-Prot (Human)
Match: TEKT2 (Tektin-2 OS=Homo sapiens GN=TEKT2 PE=1 SV=1) HSP 1 Score: 338.576 bits (867), Expect = 7.622e-107 Identity = 181/405 (44.69%), Postives = 262/405 (64.69%), Query Frame = 1
Query: 226 RYAVSDWVTSNKLISLNAERIRDSSHTIRQDARKLRNETESHTKWTQHESNTKIEKRIDDINEWKVSLERCLEETDKEIQALQNEKKNLEIALEAKKLPLDVAMECLLSREEREGIDLVRDNVEHQLHKEVEGIEGIKALLQQKIAESFEQLCLLEEARHQIHCDLTDKNHALGIDAECHSLYNNSDGIDFQNNPTRTVKGSVTPETWNSFSEYNKNRGEAEIKASQRLREAIFATLEKTRNDLDAQHRATNYEYRKRIHETDQAKNELEWQKKNTEDEVATMEQDIVGLKESIEAKMGPMMSNPDSTTQSDRDHEVAQTRLEKRTQRKSVELCRDIPQYQLCYEVAEIDGSVRALSEKHQVAVTALKSLLQDLNRINEDLRIKTKSLALDQHCMEVRQKLSDPA 1440
R+ + DW T++ L+S NA+ RD+SH IRQ+AR LRNET + T W +H++ T++ +RID +N WK L++CL + D EI AL K++ E L+AK LPLDVA+ECL RE R ID+V+D VE +LHKEVE IE K LQQK++++FEQLCLL+E + Q++ D K L ID C SL S I + +PTR GS T + W+ FS +NK+R EAE+KA+ LREA T+ +T N+L+AQ AT + +RKR+ E ++ +EL+WQ+KNT +E+A +++DI L+E + K+ + +++ TRLE RT R +VELCRD QY L EV +++ ++ AL +K A AL +L + L R+ D+ K S+ LD CM+ R+KL+ PA
Sbjct: 11 RFQLPDWHTNSYLLSTNAQLQRDASHQIRQEARVLRNETNNQTIWDEHDNRTRLVERIDTVNRWKEMLDKCLTDLDAEIDALTQMKESAEQNLQAKNLPLDVAIECLTLRESRRDIDVVKDPVEDELHKEVEVIEATKKALQQKVSQAFEQLCLLQEVQQQLNSDHRGKMETLEIDRGCLSLNLRSPNISLKVDPTRVPDGSTTLQQWDDFSRFNKDRAEAEMKAATELREATALTIAETNNELEAQRVATEFAFRKRLREMEKVYSELKWQEKNTLEEIAELQEDIRHLEEDLRTKLLSL--------------KLSHTRLEARTYRPNVELCRDQAQYGLTDEVHQLEATIAALKQKLAQAQDALDALCKHLARLQADIACKANSMLLDTKCMDTRRKLTVPA 401
The following BLAST results are available for this feature:
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