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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024791 ID=TCONS_00024791|Name=TCONS_00024791|organism=Clytia hemisphaerica|type=transcript|length=1589bp
CGTTTTGAGAGAATTATTGTTTTGGAAGTTTAATCTACGTGAGTTGAATA
ACAAATCAataagaaaatatgaaattccagatttaaaagttttttcagat
gcAAGTGCCACGGGAATTGGTGCAAttcttgataaaaatgtatGTTATAG
AAACTTGAAGCGGTTAGAAATAGAAGAAAGTTCTACCTTTAGAGAATTAT
TGGCTATTAAATATGCGATAGATTCTTTTGACGAAATGTTAGATAGTAAA
ACGATTTTATGGCACACAGACAATATAAGCACAGCGATCATTATCAGGGT
AGGTAGCAATAAAGATTTGTTGCAAGGTTTAGCGAACAATATATATTTAT
CTTGTAAGAAAAAGGATGTAAAATTAACTGTCACATGGATTTCTAGAGAC
AAAAATGGACAAGCTGACAAGGTCTGATTGCAAGCGGTATGAAAAGGTAT
TTCAAAGTTTACGATCCAAAATTGGACTCTTTAGTAAATTCGGTACCAGC
AGTTTTAAAACATGCAAGATCAGAAAGCACAAATAAAAAGTACGaaggat
atttcaaaaaatggattAACTGGTGTAAACAATTTCGGGAGATCAGTCCC
ATGCCCACGAAAGAACAATATGTCGTTTTGTTTATAGTTTCATGCGTACA
ACAAGATAAATCTTTTTCTGTAATAGAGTCTACAATCATggcaataaaat
attttcatgcgATTTCGGGCCATCAATTTGTCCAGACATCGATTTTGAAA
TACGCTCTAGAGGCAGCAAAAAGATTGGTTGGGAAGGAAGCATAAAGAAA
AAGGAACCGATTACAGTAGACATGCTAAAATTGATGATTAAAACATTATC
GGCCAGGAAAGACAGTTTAAAGGCTCTGCGATTAATTACAATTTTAATAG
TATCATTTACtgggtttttgagattttcggAATGTCAGAACTTGAGAAGA
TCGGATATGAAGTTTTTTACGACTCACGCCATGATTTTTATCGAGAAAAG
TAAGACGGACGTTTACAGACATGGCCATTGGTTGTGCCTCGCTAGGTTAA
AATCACATTTTTGTCCAGTGAGAGCATTAGAGTTGTACTGTACGAAGATA
AAAGAAAATTCTAACTCTAACAACTTTATTTTCAGAGCATTAACAACAAA
ACATAAACTTCGAAAGGCTAACAAAGCAGTGTCGTATTCAACAATTCGTA
ACGAATTTAAAGCTATCGTAAATGTGTTGGGTTTTGATAAAAGGTTGTAC
GGTTTGCACAGTTTAAGATCAGGTGGTGTTTCCACAGCCGCAGATCTGGG
CGTGAAAGACAGATTATTAATGAAACATGGAAGATGGAAATCTCATAACG
TTAAAAACAGGTATATATCCGAAAGTATTAAAAGTTTATTATACGTATCT
AGGAGTTTAGGTTTATGAATgtttaagtaacttttttaataaagACTCAC
GATAATTGTCTCATGCTCTTAGTCTACAGGCTTTGGTACGGCTCCTACTA
CATGGGTACATGAAAGATATCAATCTGTCTCGAAATCGAGATTTCtagtt
gttcttttttgttttgtgtcTCAGGCCTATAATTTCGGA Run BLAST on NCBI transcript from alignment at sc0000510:197166..199240- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024791 ID=TCONS_00024791|Name=TCONS_00024791|organism=Clytia hemisphaerica|type=transcript|length=2075bp|location=Sequence derived from alignment at sc0000510:197166..199240- (Clytia hemisphaerica)
CGTTTTGAGAGAATTATTGTTTTGGAAGTTTAATCTACGTGAGTTGAATA
ACAAATCAATAAGAAAATATGAAATTCCAGATTTAAAAGTTTTTTCAGAT
GCAAGTGCCACGGGAATTGGTGCAATTCTTGATAAAAATGTATGTTATAG
AAACTTGAAGCGGTTAGAAATAGAAGAAAGTTCTACCTTTAGAGAATTAT
TGGCTATTAAATATGCGATAGATTCTTTTGACGAAATGTTAGATAGTAAA
ACGATTTTATGGCACACAGACAATATAAGCACAGCGATCATTATCAGGGT
AGGTAGCAATAAAGATTTGTTGCAAGGTTTAGCGAACAATATATATTTAT
CTTGTAAGAAAAAGGATGTAAAATTAACTGTCACATGGATTTCTAGAGAC
AAAAATGGACAAGCTGACAAGGTAAGCAAAACAACAGATTACGACGATTG
GTTTGTGAAATCTTCTTTTGTGCACAGTTTGGAAACAAAGTGGGGCAAGT
TTAGCATAGATTTATTTGCAGATAGTAATAACACAAAATGTGAACGCTTT
TGCTCAAGGTATTTTTCTCCAGGGAGTTTCAAGGTAGATGCCTTTTCGTT
CGATTGGTCGGGAGAATTTTGCTATATGGTGCCTCCCCCCTATTTGATTC
CCAAAACAATTAAACATTTCCTAGCGTCTCAAGGTAAGACAAAAGGTGTT
TTCATTGTCCCCTTCTGGCCTTCTGCAGTATTTTGGCCTTACTTAATTAA
AGAAGAGGGGGTATTTAAAGATTTTGTTAAGGAAGCTATCTTTTACAAAG
ATTCTAGAGTTTTTATCTCGCAAGGGGAATATAAAGGTTCAATTTTGGGA
GATTCTGATCTTGTTATACCGGTTTACGTTTTAATGATTGAAAATCACTT
TGTTTAGGTCTGATTGCAAGCGGTATGAAAAGGTATTTCAAAGTTTACGA
TCCAAAATTGGACTCTTTAGTAAATTCGGTACCAGCAGTTTTAAAACATG
CAAGATCAGAAAGCACAAATAAAAAGTACGAAGGATATTTCAAAAAATGG
ATTAACTGGTGTAAACAATTTCGGGAGATCAGTCCCATGCCCACGAAAGA
ACAATATGTCGTTTTGTTTATAGTTTCATGCGTACAACAAGATAAATCTT
TTTCTGTAATAGAGTCTACAATCATGGCAATAAAATATTTTCATGCGATT
TCGGGCCATCAATTTGTCCAGACATCGATTTTGAAATACGCTCTAGAGGC
AGCAAAAAGATTGGTTGGGAAGGAAGCATAAAGAAAAAGGAACCGATTAC
AGTAGACATGCTAAAATTGATGATTAAAACATTATCGGCCAGGAAAGACA
GTTTAAAGGCTCTGCGATTAATTACAATTTTAATAGTATCATTTACTGGG
TTTTTGAGATTTTCGGAATGTCAGAACTTGAGAAGATCGGATATGAAGTT
TTTTACGACTCACGCCATGATTTTTATCGAGAAAAGTAAGACGGACGTTT
ACAGACATGGCCATTGGTTGTGCCTCGCTAGGTTAAAATCACATTTTTGT
CCAGTGAGAGCATTAGAGTTGTACTGTACGAAGATAAAAGAAAATTCTAA
CTCTAACAACTTTATTTTCAGAGCATTAACAACAAAACATAAACTTCGAA
AGGCTAACAAAGCAGTGTCGTATTCAACAATTCGTAACGAATTTAAAGCT
ATCGTAAATGTGTTGGGTTTTGATAAAAGGTTGTACGGTTTGCACAGTTT
AAGATCAGGTGGTGTTTCCACAGCCGCAGATCTGGGCGTGAAAGACAGAT
TATTAATGAAACATGGAAGATGGAAATCTCATAACGTTAAAAACAGGTAT
ATATCCGAAAGTATTAAAAGTTTATTATACGTATCTAGGAGTTTAGGTTT
ATGAATGTTTAAGTAACTTTTTTAATAAAGACTCACGATAATTGTCTCAT
GCTCTTAGTCTACAGGCTTTGGTACGGCTCCTACTACATGGGTACATGAA
AGATATCAATCTGTCTCGAAATCGAGATTTCTAGTTGTTCTTTTTTGTTT
TGTGTCTCAGGCCTATAATTTCGGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00024791-exon-sc0000510-1575043694:198820..199240 | TCONS_00024791-exon-sc0000510-1575043694:198820..199240 | Clytia hemisphaerica | exon |
| TCONS_00024791-exon-sc0000510-1575043694:197166..198333 | TCONS_00024791-exon-sc0000510-1575043694:197166..198333 | Clytia hemisphaerica | exon |
| TCONS_00024791-exon-sc0000510-1510915933:198820..199240 | TCONS_00024791-exon-sc0000510-1510915933:198820..199240 | Clytia hemisphaerica | exon |
| TCONS_00024791-exon-sc0000510-1510915933:197166..198333 | TCONS_00024791-exon-sc0000510-1510915933:197166..198333 | Clytia hemisphaerica | exon |
| TCONS_00024791-exon-sc0000510-1491911889:198820..199240 | TCONS_00024791-exon-sc0000510-1491911889:198820..199240 | Clytia hemisphaerica | exon |
| TCONS_00024791-exon-sc0000510-1491911889:197166..198333 | TCONS_00024791-exon-sc0000510-1491911889:197166..198333 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000510 | supercontig | sc0000510:197166..199240 - |
Blast
The following BLAST results are available for this feature:
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