TCONS_00024793 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024793
Unique NameTCONS_00024793
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1538

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024793 ID=TCONS_00024793|Name=TCONS_00024793|organism=Clytia hemisphaerica|type=transcript|length=1538bp
CTCTACTTCAAAAAATTCCGAAGAAATTATGGTTGCATTACCGAAGGTCT
CGTTctcggtttttttattttcattccaaaTTGTTTTGTTGGCGCTATTT
GCCAATTATGTTGAATATGATAACGTTGGACAAGCTGTTAATGATAGCTA
TCCACAATTTCAAGATGTGCATGTTATGATGTTTTTTGGAATCGGCTTTC
TGATGACGTTCTTGAAGCGATATGGATTCGGTTCAATCACCTATAACTTC
TTGATTGGTGCTGTGGTTATCCAATGGGCGACGCTTGTCAACGCTTGGTG
CCACCAAAGTATTAAGAAAGCAGACGATCCAACCACTGTCAAAATTAACC
TAGTCACTTTGATGACATCAGATTTCACTTCCGCAGTTGTTCTCATTTCT
TATGGAGCTGTTCTCGGTAAAATATCACGTTTCCAGATCCTTGTCATGGC
TATTCTGGAATGTGTTGTGTTTGCAGTCAGTGAATCGGTTATCATGAAAT
ATCTTGGAATCTCCGATATTGGTGGATCTATTGTTATTCACCTGTTTGCT
GCATACTTTGGTATCGCTGTGTCAACGGTTATTGGACATCCAACAGTCAA
TGCTAAAGAAAGCTCCGACAGAACAAGTGATCTCTTCTCTATGGCAgGAA
CGATCTTCTTATGGGTTTATTGGCCTTCATTCAATAGTGGCTTACTTAGT
GGGAAAGACCATGAAGCTCAAACACGTGCGATCATCAATACCTACTTTTC
TCTTGCCGCTTGTGTAGTAACAACTATGGTCATATCTCCTATGCTtgata
agcgttttaaagttagcATGGTGCACATTCAAAATGCAACATTAGCTGGC
GGCGTTGCTGTGGGAGCAGTTGCCGATCTTCACATTCAGCCATGGGGCGC
CATTTTGATCGGAATGATTGCTTCTGTTTGTAGTGTGCTTGGTTACTCCT
ATTTGACGccatttttgagCTCAAAGCTAAAGATACATGATACGTGTGGC
ATCCACAACCTTCACGGAATACCCGGATTTTTGTCGGCAATTTTCTCTGC
TATCGCTGCACCTGCTATTGGAGAAAAAGGCCGTCAATATTACACAAACA
CGAAAGATGGATCAGACGAATGGTCATTGAAGAAGCAAGGTGGATATCAA
ATTGCTGCTGCATTTGTCTCTTTTGCTTTTGCCGTGATTGGAGGAATTAT
TACAGGTTTTATCATGAAGCATTTGGATGGAACCGAAAGTCAAAATGATT
TCTTTGATGATAACTATGAATTTCTGACccctgaagaagaagaaggcgTA
GAAAAGAATCACAACAGCACCGCCCTGCAGAACGTCTTCTTCAATGACCC
GCCCAAGGAAGAAGGCATTATTTCATCTTAGGACTGATGGATGGTAGATG
ATCAAATGagtgtacacgcttttttttttttttttttaagaaacacactt
ttaagaaacatgaggctcagaatgcctaaaaactaagccCATTGTGtgaa
aaaattgataaacagATTGATACCTTTCATGCTTAGCG
Run BLAST on NCBI

transcript from alignment at sc0000510:205849..217570-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024793 ID=TCONS_00024793|Name=TCONS_00024793|organism=Clytia hemisphaerica|type=transcript|length=11722bp|location=Sequence derived from alignment at sc0000510:205849..217570- (Clytia hemisphaerica)
CTCTACTTCAAAAAATTCCGAAGAAATTATGGTTGCATTACCGAAGGTCT
CGTTCTCGGTTTTTTTATTTTCATTCCAAATTGTTTTGTTGGCGCTATTT
GCCAATTATGTTGAATATGATAACGTTGGACAAGCTGTTAATGATAGCTA
TCCACGTAAGTTGTTTAATTTTCTTTTGCGTTTTCCATATTGAAATCAAA
ACATTACATAAAGTGGCATGAGATTGTTCATCTAACGTTTCCAGACCATC
TAAAAAGAACGAAAAATAACTATTGAAAAGCGACAAAAAGGACGACAAAT
TTCTAAAGAACGACAAATTTCATATTTCGCCGTCCACAATCCTTACCGAA
AATGACTGTACCACCCCTACAGATTCATCCCTCTTTGTTTATCACGGGAA
TTAGCTGCATGTGGTTTAAAAGAACGGCAAATTACGTATAAGTCTCTATT
TGGTGGAAAACATTACATGAACTAACTCTATAGTAGATTCGTGGAACGCA
GCCACATATGAGTGGTTTGAAGTTTTTGGGAGGAGTGCAAAACTTATCGT
ATTACGTACATGCTCTATCCGATAGTATTAATCATTTTCCTTGGTTTCTA
CTATAAAAAATGTCATTTTTTTCGGATTTTCCCTGTAACACCATTTTTTA
GGCCATTAAAAACTTCAACGACCTCAAACAAATGTAAATCCTATCTATTT
TTGAACCAATCACATCCGGTTGGGCCCAGCGAAGGATAATATGGATCCTA
AAGGATAGCCCCCTACTATTATAAAACAAATGATTTGATTGGGTCACACT
GTGTGCATGTGTTCCAAGATTTGTCCAGACTTCACTTTGTTTTTGTCTTG
TTTATAAACGTTGGTAGGTCAATATATGACGCTATGTATTGTATTTTTTA
TGTTTTGTTAGTAAATCTATATCTAAAACTTTTTAAAAGAAAAGACTTTT
TCCCCTATTTGTCAATTAATGTAATGTAATCTCTTCCTATAAAGTTTCAC
GTTTGATTAAATCTGGGAGACTGAGTTCCAAAATAGTGATCATTAAACAA
TGAGCTAATAACATGAGATAGCCAATCAAAAGGAAGGTAGCTATTTGTCA
AATATACATTCGAGATAAGGACTTTGGCATATATATCTAGGCGTTTAGTT
TCGATTTACCCAAATCTCGTTGTATCGTTATTTGTGAAGACTCTACTTCA
AAAAATTCCGAAGAAATTATGGTTGCATTACCGAAGGTCTCGTTCTCGGT
TTTTTTATTTTCATTCCAAATTGTTTTGTTGGCGCTATTTGCCAATTATG
TTGAATATGATAACGTTGGACAAGCTGTTAATGATAGCTATCCACGTAAG
TTGTTTAATTTTCTTTTGCGTTTTCCATATTGAAATCAAAACATTACATA
AAGTGGCATGAGATTGTTCATCTAACGTTTCCAGACCATCTAAAAAGAAC
GAAAAATAACTATTGAAAAGCGACAAAAAGGACGACAAATTTCTAAAGAA
CGACAAATTTCATATTTCGCCGTCCACAATCCTTACCGAAAATGACTGTA
CCACCCCTACAGATTCATCCCTCTTTGTTTATCACGGGAATTAGCTGCAT
GTGGTTTAAAAGAACGGCAAATTACGTATAAGTCTCTATTTGGTGGAAAA
CATTACATGAACTAACTCTATAGTAGATTCGTGGAACGCAGCCACATATG
AGTGGTTTGAAGTTTTTGGGAGGAGTGCAAAACTTATCGTATTACGTACA
TGCTCTATCCGATAGTATTAATCATTTTCCTTGGTTTCTACTATAAAAAA
TGTCATTTTTTTCGGATTTTCCCTGTAACACCATTTTTTAGGCCATTAAA
AACTTCAACGACCTCAAACAAATGTAAATCCTATCTATTTTTGAACCAAT
CACATCCGGTTGGGCCCAGCGAAGGATAATATGGATCCTAAAGGATAGCC
CCCTACTATTATAAAACAAATGATTTGATTGGGTCACACTGTGTGCATGT
GTTCCAAGATTTGTCCAGACTTCACTTTGTTTTGGGACTTTCTTTTTAGT
TTTAATTTCCGTACTTAAAATATCAATTCACTCAAATATACCTTAAAAAT
AGAAATTGTACCGGGGTGTTGCAATAGTACCTAAGAGAAGGAAAGGTACG
GGTATTTTTGCCTTTAAGAGTGTCATCACAATCCATCATCATCACCATTC
AATGTTATCAAAAAAGTAAAAGTTCTGTAAACCCTGATTAAGATAAGCAC
TGATACATCTGCTAAAATGCAAGGATATTCTCTCGTGAATTCGAATATGT
TTTTCACTTTGACAGTATTTCATTCATTTATTAATATTTAAAGAGGAGCA
TACATCAGTTAAATAAATAAAAATTTACAACTGCTATCAACGTCACTCCT
CTCACCCAAATCGTACACTCGCTTCACATCACACCTCAAGACACACACTC
AAGATAAAAATTAGATAAAATGACATAAATACTAAAATAAATACTATTAT
AAATTGATAAAATCTAAAATCTAATGTTTTCGAAAGATAGAGTTTAGTCT
TATGTATCAAAGGATGAGCATCGTGGTCAAAGTGGCCAGAAAGGCTGAGA
GACTAGAGGTTTGAGACTAAGACTGAGATGTGATTTTTTTTGAGATGTGA
GATTTCGATTGAGCTTTAAAAATGTGTCCGAGAACGATATCTTTTTAAGT
ACATGGTTAATTGTTTGGGGGGAGTCTTGAAAGATAACATGATTGATATC
TGGTAATCTTCCAAAAGTACACACTATGAGCAAACAAGACGACTCATCAG
AGTTGAGAATTTCGTATGGTGTTCGATTATTCATAGGTAAAAATAATCGT
ATTAAACAAACGGGGAGTACTAGGTTTGGAAACCCGGGTCGGATTTGAAA
AAAACTGGCTTTACAGAGAAGTTAGAGACTAGGGTAGATAAAAATCAGAA
CGTTAGCGTCATCACATACCTGGCAGTTATTTACGTCTAAGTTTTTTTTA
GAGGGTTACGTAAAGTCTGTGCATGGATCCGAAATCCTCAATGTTCAATT
GACGCCTACGCACACCAGAGATTTTCCATTAGGCCCGATTTTTAACTTTA
ATCTTGAACGACCTCATGGGGCCACTGGTGATCCTGGGGGCAAGATTGCT
GGTATACCTCCGGATAGGCCCCGTTGGTCAGCGCAATCTCTCCTCCAGGA
CAACTAGTAACCACATGAATGCATTTTTATATTTTTAAGAAAAAAGAAAA
CTTGTAGATATATCTAGAGGACAAATTTTCATTATTTATACCACATTGTT
TTGGTGATTAAAGAGATTGAAATAAAAAAATAAAATAAAAATTATACTAT
AAATGTTACGTCATCATCAGTAAAAAGTAACAATCCTACTTTTTTCCAGT
TTTTTCGATCTCTTTTATAATAATCAACTTTGGTGGGCATTTAATTTTGT
TGATGCCTGGAAAAATAAATATTACAGGAGTTTAATTCGGCCATTGAGGA
CAAAATATTGCTGTTAGATAAAAGATAACTGTTTTTAAGATCGAAAAGGC
ACAAATTTGGAAGATACATGAAATATTTTGTGGAAATTATAAGTTTGGAT
TTCAGGTAAATTCTGTTTTTGCATAAATATTTCTTCCTGAAAGCTGAAAT
TTTGTTCATTGAAACGTGAGCCCGGAGGCCCGGACGTAAGTTATAGATTT
TAAAGAACTTATGATTGACTTTAATCGATTTTAAGCAGGTCGATCACTTT
TTATTACCTCCGGGGATTTCTTATAAACCAGAATCGCCCACTTGATTTTT
TTTAATCGATGACCAATCAATTGGTTCCGATAATCGATAGGTAATGAAGC
CTGGTGTAGCACCATGTCAATATCACTTTCTCTAGAAGCTTCTAACACCG
TGTTATATCACTTTCGTTTTCTAAATTTTGTTCCACACCGCGAAATAATC
GTAATACTTTCGCTATGTGAAAGAACAATTTGAGCCTCAGATTTCGAGGT
TACTAAGAAAGTTTAAATTTTAGCAGATTTAAAAAGAAATCCTACCGGGT
CTGTGAGAAGGAGGTGTTCTCGTAAATTTAATTTGGTCTAATATTTAAGT
CAAATATTAAAGCCTTAAAATTTCAAAAAATCGGTAACAGCTAGTAAGGC
TGAGCTAAAATTTACTGGTTCTTATAAAAGAGGGTAAATTACTATAAAAA
AGGATGTTTTACTTTGTCTGTTTTAACGAACTTTTTTTGCTCAGCATATC
TACAAATAAGGCTATAACAATGCATTGCAAGAGATCTTGATAACTCGATT
AACAACAACATCTTCACGCATACCTCTGAAATATTATGAAATCATATTAT
AAACCTTGATTAGATCAGACCTCGTAATTAGATTTTTAAGTAACATTTAA
AAGTTAATAAAAAATGACTTAGTAGTACTTAATAGTATGATACCGATAGA
GTGGGTGTTTGATCTGTCATTCCAAATTATGAAAGATTGGTCATAGGCTT
TTGACGGAGAGTGGCCGAGAAATAGTGTCGATTTTCGTTAGGGCCTCTAC
TGGTCTTGTTCTACCAGCCTAATCCAGGAATGATTTGTACAACAATGAAC
ACCCTCGACTCCAGGCCTTACCTGACCCCCTTACGCTATACATGATATGC
ACCACTGGTGAGTCTTCTGAAAACTTTTAAAATTTTCCACCCAATACGTC
AACTTAAACAATAGAAAAAGTGACGTATTGGGTGGAACAAAAACAGAAAA
GTCGCATAATTTCGTGAAGTCATTGCAGTGGTGCGTATCATGAATTGATA
ATTCTGATCTACGCATTGACGGGGGATATAAATGATCCCTTCAGTTTTAC
AGCACTGGCCTCTTTACGTCGCAGAATCGTTTAACGGCCCTGGCTCGCGA
GGGTGCAACAATAGCGAGTTTATGTATTCGAGATAAATCGAGGGGGACGG
TATAAAGCAAAGCTGACATGGGGTCGAAATCGCCGTCCACTTTGCTCGAC
GACGGTAAAAACACCAAGATACCGTCGTCTGTTTAGATGGGCAAAGGCGA
TATAGAGCCGTCAACCATCAACTATCGACTTTGTTTTGTATCGTCGCCCT
CGATATCCTCCGATACATAAACTTGGTAATGCGTTCACGTAGGAACACTG
AACAATAGATGTACCGTTACAGAACTCTTGAATCAGAGCACAGCATCCTA
TTCCCTCACGTGGTATAAAATAAGTGAATATATATCCGGTTGACACGCAA
GGTAAATTGACATACCATACGTCCATTTTCCAAGCTTCCCAAAATGCACT
GTAAGGGTCGAAATCAGCAAAGATGAGAAAAATTGCACGCTAAGGATGTA
AAAATTTCGAAAATCTGACCATATTTTGCCTGAAAATGCTCAAAAAATTT
CAAGAAAATGCATCGTAAGGGTTGATTTTTCACTCAAATGTGATCAAATT
TTTAAAATTTTCTCTGCACTGTAAAGGTCCGATTTCAAAGGTCTAATTTT
GGGTCGCACATATGGTCGTTTTTAATCGAGTGCCCCCTCTTCTTCTTCAG
TATTGTCTCAAACATCAAACTCGAACCCATTCTCCTTTAGTTTGTTCTTT
TAAGGATTCTGATAGCAATCATGAAAAAGATTGTCTATCACACCCCCAAT
CACTAAAAACTAAAAATGGTGCAAGCAGGCGCAAGTGGCTCTGGATGCGA
GATTGATGAAACATTCAAAAAAGGAAGAGTTCTAGTTGAAGGAAAAAAGT
TGAAAAATTTTTAAAGGCCCAGCATTATATTTAAAAATTCTTTCTTTTGC
AAATTTTCCAATTAGGTAGGGGTCTAACTGGGGCTGTAACAAAGGGGTGT
CATTTATATGTCCAGACACTATTCAGATTTAGAAATCATAAAGCAAACCG
CTTCCCGAAAACATTTTTTATTTCTTACACAGAATTTCAAGATGTGCATG
TTATGATGTTTTTTGGAATCGGCTTTCTGATGACGTTCTTGAAGCGATAT
GGATTCGGTTCAATCACCTATAACTTCTTGATTGGTGCTGTGGTTATCCA
ATGGGCGACGCTTGTCAACGCTTGGTGCCACCAAAGTATTAAGAAAGCAG
ACGATCCAACCACTGTCAAAATTAACCTAGTCACGTGAGATTTTACTTTA
AACTTCTTTTCCACACATGGCAAAAATCTGATTATTTAGTTTGCACTATT
CTATGTATGCACGTATCTCAGTCTTTAAAAATTGGATTTGCCACCGCAGT
CAGAGGTGACCCAAGATTCCTCTTTCGATAGATATCCACCTATCGAAATA
TAGGTTGGGGAGGGCGCCACTCTTTCTCCATAGATTTTACTCTAATTTAC
CATTGGTCCTTCTCTTCTTAATTACTGAGCATCAAGCAGAGAGGTATCGA
GTATCATTTTCTACTGAGTATGAAGTCTTTGGTATGACCCGGCCGAGGAT
CAAACCCATGACTTTGTGCACCGTAGCCAAACACAATAAGAGGTCCTGAT
CTGTGCTCTGTTTAAGCCAACACGTGGTTCAAATCTGACCCAGACATATA
AGGCCCTAAATGATTGGATGTATAATGTGCTGAAATTTCGCCATTTTCTT
TGATTCAACTTCCTGAGAAATATTCCAGTGATTGTTCTGAGGTGTTTCTC
TAAAGATAGCGAAGGTTCTTGCAAATCAGATTCGTCGGCGGATACGGACG
GAAAATAGCTGAGAGTTAAGCTGAGAGACTTTCGTTCTCTTTCCGTTTAA
GATGGAACCTTAGTTCAGGAAATGGAATCTTAGGTGAAAAAAAGCGGAAG
GGAGGAACTAATGTTTTACCATTTTTCAAGCACAGTTTGATGACATCAGA
TTTCACTTCCGCAGTTGTTCTCATTTCTTATGGAGCTGTTCTCGGTAAAA
TATCACGTTTCCAGATCCTTGTCATGGCTATTCTGGAATGTGTTGTGTTT
GCAGTCAGTGAATCGGTTATCATGAAATATCTTGGAATCTCCGATATTGG
TGGATCTATTGTTATTCACCTGTTTGCTGCATACTTTGGTATCGCTGTGT
CAACGGTTATTGGACATCCAACAGTCAATGCTAAAGAAAGCTCCGACAGA
ACAAGTGATCTCTTCTCTATGGCAGGTATAAAATAATTTTTTGTATCATT
TTCTTTTAATTATTTGAAAAAATGCTTCTTTACGAAGAAGACAAAGAATC
GTTTAATGGTGACCATGGGGCCAAGGGGGTACTAGGGTCGGCGGATAAGG
GGTATGTCCAAAAACCGACCCTTAGAGAGGCTGATTCTTGCTGAAAAGGT
GACCCTTGGAGAGACTATTTTGAAAAATTATCTTCAATTTTTGAAAAAAG
TTTTACCCTCAATGAGACTTTTTTACAATTTTTCACTTGAAATCATAAAA
ATTTCCTAAAATCCTGAATTTTCCGACCCTTACAGAGACTAATTTAAAAC
TTTCTGATTTTTCCGACCCTTAGAGAGACTTTGAAGGGTGAAAAACCAAC
CCCTTCCAATTTTGCCTAAGTATCCCCCCCCGGGCTATGGGGTGGATTTC
CCGATCCTTGACAGCTGCCATAAAAAATCATGGGAAAAGCCTCGGGAAAA
GTTCTGTCACAAAAAATAGCACAATGATTTAGTTTTCACTGTGATTTTTT
TATACTGAAATTGATACAACTGTATAAGGAAATTAGTAGATTCTTTTAAA
GGTTTGCTTGTATTGCAGCTCTGACCGATAAGTAGGATCCGATGGTAGCC
ACATGAAACTTTGATCCAATGGTATTTATCACAGAAAAATAAAACGTTAT
CTGCTGGACTTGGATATGATAGGACTATCGAGATTTTGAGGTTCTTGACG
CGGGAAGACGTGTGGAATAGCTATAAAAACGTTTGCTTGAGTGAAAACTT
TCACCATTTTTTCACTTTTCTACAGGAACGATCTTCTTATGGGTTTATTG
GCCTTCATTCAATAGTGGCTTACTTAGTGGGAAAGACCATGAAGCTCAAA
CACGTGCGATCATCAATACCTACTTTTCTCTTGCCGCTTGTGTAGTAACA
ACTATGGTCATATCTCCTATGCTTGATAAGCGTTTTAAAGTTAGCATGGT
AAGTGAAAGCAAGGAACAATACGTAAAATACAAATCCCGGAGTCTAAGTC
ATTTTCAGTGGAATCTGAGTGCGAAAAATGGAATCTTTCTCACAGCCCCG
GTGGAACTTTTTTTCCTCAGTGGGTATAAAAATTCCTATTGAAATCCTAA
TGGAGAAATTCTATTGTTCCAAGGTTAAAAACTCTAGTGGGGATGGTTTT
GTATTGCAATTTTTAAACATGAAATTTCAAGTGGGGATGAAATCAAAGTC
GATTTCCCAATGGGGCCGAAATTGAAGGGTATTTTCCAACCGGGAACGAA
ATCTTTGCTTCATTTTCCAGTGAGGCTAGGGTCTGTGACACAAGGGTGTC
TTATGAGAAAGGAAAGTATTTCAGCAAAGGCATTGCTTGATTACTACGAA
AATAAACTCTTAATCTTGTAATGGGTATCAAGGATTAGTTTAAAATCGTG
TTAGAGTACTACACTGTAATCAACTTTTCGAATTTGACCTTAAGCTGTCA
CAGATGTTTTCTAGATTCCTTGACATGACAAAAACACTCATAGCNCCTTA
AGCTGTCACAGATGTTTTCTAGATTCCTTGACATGACTAAAACACTCATA
GCCAGTTGGTCAGTAATTGAAAATAAATACATAAATTCCTGTTATGAATT
CAGTGCTTTTGTCAAGTATAACGTTTACCCCAATTGTCCATATATTTTGT
AAAATGTCCCGTGGTAACTTTTACAGTAATGACGCTTTTGGAAACTCAGT
TTTTTGCAAACTTTAAAAAGTTTCAAAATCATACTTTTTAGGTGCACATT
CAAAATGCAACATTAGCTGGCGGCGTTGCTGTGGGAGCAGTTGCCGATCT
TCACATTCAGCCATGGGGCGCCATTTTGATCGGAATGATTGCTTCTGTTT
GTAGTGTGCTTGGTTACTCCTATTTGACGGTAAGTTGGCGTTTACGTCAT
ACGCCCTATTAAATGATTTTTGCTCAGCGGTACAAAAAACAACTGAAAGT
TTGCTTCTCCTGATTTTTACTCATTTTTGAGCTCCAAGCTAAAAAGATAC
ACAATATCAGCCATCAACGACTTTTTACTAGTTACGCCCTACGCCCGTAT
TATTTTTTGGTAAGTGGTACAAGAAAATAAGACTGAACATGGGCTTCTCC
TAATTTTTCAGCCATTTTTGAGCTCAAAGCTAAAGATACATGATACGTGT
GGCATCCACAACCTTCACGGAATACCCGGATTTTTGTCGGCAATTTTCTC
TGCTATCGCTGCACCTGCTATTGGAGAAAAAGGGTAAGCAGCAAAACTCA
TTGCAAATTCAAAATATCGGATTGGATGATGGATTAGTATTCTTGACAAA
TTTTCTTGGTGATTTAGAAAATTTAATGAATTACCATATCCATGTAGTAC
CTTTTCAGAAAGAAGTTACTTAAAGACTGTTCGAGTAGACTGAGACAGAC
GTTTCATATTACGCAAGTTATTTTTTGCCGATAGGGAGGGGCGAGGTGAA
AAGAACTTAATACCAATTGGGGCCGAAAAATCGTCAGTTGTCATAACGGT
AGTGATTTTAAATTGTATTACTCTTTGAGCCCGAAAATCCAATGAGGAGT
TTCAATATTATAGTGTGTTTTTCAGTAAGGACTGGATTGAGAGTACATTA
ATTTTCGAATAAAAATTACCTTAAAAGTGAAAAATATTCTTTAAATCCGC
TAAAGACGGTTGCTCTTCGACTTTAAAAACACATTAAAGGATAATATTAT
GCCGGAAATTCGATATTTATTGCAATTTCAAGGTTTTATAGATTCTCAAT
ATTTTTGAGAACTTTTCGCGAGCATAAACTTTCGCGAATTGCCCTGTTGA
GAATCTTTAAAGACATTTTCTTTTGCGAAAAAGGCCAAAATTCACGAAAA
TTGCCACCAAAGTTTCTGCTCGCGAAAGTTTGTACACCTAAAGTAGTTGA
GTAAATGGGTGTTCTAAGGAAGAGGAGTTACGAAAAGTTAACCATTTATT
TTCATTAGCCGTCAATATTACACAAACACGAAAGATGGATCAGACGAATG
GTCATTGAAGAAGCAAGGTGGATATCAAATTGCTGCTGCATTTGTCTCTT
TTGCTTTTGCCGTGATTGGAGGAATTATTACAGGTATATTTAATTATAAT
TCACAGTTCCAAAACTTAGTAAAGCTCTTTGATAAACTTTCTAGATAGAC
AAACAGTGGACACTCTCTAATTCGACTCTCTACTAATCGATACGCTCATA
GATTTATAATAGAGCCCCGTATCGATTAGTAGAGAGTCGAATTATGCTAC
CTAAGTCACGTGACATTACAATATAATTTCAGCGCTTGACCAACCCGCGA
AGCTGGGTTTTCGAAAACAATAGCAGCAATATTCTTTGCGATATTCACTT
TTTTTTGCTTGGAAGAGTTTAAAGCAGTCCACCTAGCCCTTCGGGCTTTA
TAAATCAATGGATACGCTCCATTATTCGATATGCTCCCCATTATTTGATG
AAAATCCGATTCCCCTTAAAAAACGAATGAAAGAGCGTCAATTATATGTA
TAAAAAATACAAATTCTTTTTTGTCACAAGACTCTGAGTATCATGTTTCT
ACAATCATCAGTTGTGAAAATAGTGAATTGAAAAATTTCGGTATAGTATT
TTGATACCATTTGATAACATTTGCTACTCAACTTTCACTGATTTCAACCT
ATTATTCTTCTGTTTTACTTTACCACACTCATTTCCACTCTTCAGGTTTT
ATCATGAAGCATTTGGATGGAACCGAAAGTCAAAATGATTTCTTTGATGA
TAACTATGAATTTCTGGTAAGCTGGTTGTTTTATATAAAAATAAACGTTT
TCTCAAGGTAAGATTCAGAGGATAAGAGATATAGTAGGGGGGTAAGCCTG
GGGTTCCGTGACATCTTTTTTACGACCTAGCCATTTTTAGTCTATTCCAA
AGAACAGTATATTACAAGATATTTCTGAGAGGGAGGACTCAGATTAGGCC
CGGGAAAACTTTTTGTGACGATAATAGTGACGCCATGGGCAAAACTGCAA
GGGAAAAAAAGGGGTAGAGAAATAGCTTATTTTCAAGAGTCAAAATAAAC
GAAAGTTAAAAAACATACTAGGGTTACTACCCCTCCCATTTGCTTTCGTC
TACAAAAAGAAATCGACAAAGTTGGATGAAATATCTTTTGATATAAAAAT
GTAAGAATACAGAACATTGTGAAAGAGATTATAATAATACTGTACAGATG
AGATCGTTCTAACAAAGACTCTCAACTCTTCATTTTATCTCAAGGAAGTT
TGAAAATTCTTTTTGAGAAGTTAGAGGTACGAGTTCTATGATATTTCCGT
TCTATTCCAGACCCCTGAAGAAGAAGAAGGCGTAGAAAAGAATCACAACA
GCACCGCCCTGCAGAACGTCTTCTTCAATGACCCGCCCAAGGAAGAAGGC
ATTATTTCATCTTAGGACTGATGGATGGTAGATGATCAAATGAGTGTACA
CGCTTTTTTTTTTTTTTTTTTAAGAAACACACTTTTAAGAAACATGAGGC
TCAGAATGCCTAAAAACTAAGCCCATTGTGTGAAAAAATTGATAAACAGA
TTGATACCTTTCATGCTTAGCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013924XLOC_013924Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024793-exon-sc0000510-1575043694:217416..217570TCONS_00024793-exon-sc0000510-1575043694:217416..217570Clytia hemisphaericaexon
TCONS_00024793-exon-sc0000510-1575043694:211437..211638TCONS_00024793-exon-sc0000510-1575043694:211437..211638Clytia hemisphaericaexon
TCONS_00024793-exon-sc0000510-1575043694:210446..210735TCONS_00024793-exon-sc0000510-1575043694:210446..210735Clytia hemisphaericaexon
TCONS_00024793-exon-sc0000510-1575043694:209473..209645TCONS_00024793-exon-sc0000510-1575043694:209473..209645Clytia hemisphaericaexon
TCONS_00024793-exon-sc0000510-1575043694:208542..208679TCONS_00024793-exon-sc0000510-1575043694:208542..208679Clytia hemisphaericaexon
TCONS_00024793-exon-sc0000510-1575043694:208188..208309TCONS_00024793-exon-sc0000510-1575043694:208188..208309Clytia hemisphaericaexon
TCONS_00024793-exon-sc0000510-1575043694:207338..207462TCONS_00024793-exon-sc0000510-1575043694:207338..207462Clytia hemisphaericaexon
TCONS_00024793-exon-sc0000510-1575043694:206655..206725TCONS_00024793-exon-sc0000510-1575043694:206655..206725Clytia hemisphaericaexon
TCONS_00024793-exon-sc0000510-1575043694:205849..206110TCONS_00024793-exon-sc0000510-1575043694:205849..206110Clytia hemisphaericaexon
TCONS_00024793-exon-sc0000510-1510915933:217416..217570TCONS_00024793-exon-sc0000510-1510915933:217416..217570Clytia hemisphaericaexon
TCONS_00024793-exon-sc0000510-1510915933:211437..211638TCONS_00024793-exon-sc0000510-1510915933:211437..211638Clytia hemisphaericaexon
TCONS_00024793-exon-sc0000510-1510915933:210446..210735TCONS_00024793-exon-sc0000510-1510915933:210446..210735Clytia hemisphaericaexon
TCONS_00024793-exon-sc0000510-1510915933:209473..209645TCONS_00024793-exon-sc0000510-1510915933:209473..209645Clytia hemisphaericaexon
TCONS_00024793-exon-sc0000510-1510915933:208542..208679TCONS_00024793-exon-sc0000510-1510915933:208542..208679Clytia hemisphaericaexon
TCONS_00024793-exon-sc0000510-1510915933:208188..208309TCONS_00024793-exon-sc0000510-1510915933:208188..208309Clytia hemisphaericaexon
TCONS_00024793-exon-sc0000510-1510915933:207338..207462TCONS_00024793-exon-sc0000510-1510915933:207338..207462Clytia hemisphaericaexon
TCONS_00024793-exon-sc0000510-1510915933:206655..206725TCONS_00024793-exon-sc0000510-1510915933:206655..206725Clytia hemisphaericaexon
TCONS_00024793-exon-sc0000510-1510915933:205849..206110TCONS_00024793-exon-sc0000510-1510915933:205849..206110Clytia hemisphaericaexon
TCONS_00024793-exon-sc0000510-1491911889:217416..217570TCONS_00024793-exon-sc0000510-1491911889:217416..217570Clytia hemisphaericaexon
TCONS_00024793-exon-sc0000510-1491911889:211437..211638TCONS_00024793-exon-sc0000510-1491911889:211437..211638Clytia hemisphaericaexon
TCONS_00024793-exon-sc0000510-1491911889:210446..210735TCONS_00024793-exon-sc0000510-1491911889:210446..210735Clytia hemisphaericaexon
TCONS_00024793-exon-sc0000510-1491911889:209473..209645TCONS_00024793-exon-sc0000510-1491911889:209473..209645Clytia hemisphaericaexon
TCONS_00024793-exon-sc0000510-1491911889:208542..208679TCONS_00024793-exon-sc0000510-1491911889:208542..208679Clytia hemisphaericaexon
TCONS_00024793-exon-sc0000510-1491911889:208188..208309TCONS_00024793-exon-sc0000510-1491911889:208188..208309Clytia hemisphaericaexon
TCONS_00024793-exon-sc0000510-1491911889:207338..207462TCONS_00024793-exon-sc0000510-1491911889:207338..207462Clytia hemisphaericaexon
TCONS_00024793-exon-sc0000510-1491911889:206655..206725TCONS_00024793-exon-sc0000510-1491911889:206655..206725Clytia hemisphaericaexon
TCONS_00024793-exon-sc0000510-1491911889:205849..206110TCONS_00024793-exon-sc0000510-1491911889:205849..206110Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000510supercontigsc0000510:205849..217570 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0134597	0.0131025	0.0950205	0	0.0543356	0.0285623	0	0.0326304	0.0115001	0.0280303	0.0137863	0.0179809	0.744672	1.92195	1.92963	2.67548	2.76382	1.67105	0.192801	0.501977	3.98794	4.43945	5.20728	7.13574	2.60831	1.67741	32.2407	43.0698	0.427542	0.361309
Blast
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BLAST of TCONS_00024793 vs. Swiss-Prot (Human)
Match: RHAG (Ammonium transporter Rh type A OS=Homo sapiens GN=RHAG PE=1 SV=2)

HSP 1 Score: 304.679 bits (779), Expect = 1.519e-97
Identity = 184/434 (42.40%), Postives = 260/434 (59.91%), Query Frame = 2 
Query:   44 KVSFSVFLFSFQIVLLALFANYVEYD---------NVGQAVN-----DSYPQFQDVHVMMFFGIGFLMTFLKRYGFGSITYNFLIGAVVIQWATLVNAWCHQSIKKADDPTTVKINLVTLMTSDFTSAVVLISYGAVLGKISRFQILVMAILECVVFAVSESVIMKYLGISDIGGSIVIHLFAAYFGIAVSTVI---GHPTVNAKESSDRTSDLFSMAGTIFLWVYWPSFNSGLLSGKDHEAQTRAIINTYFSLAACVVTTMVISPMLDKRFKVSMVHIQNATLXXXXXXXXXXDLHIQPWGAILIGMIASVCSVLGYSYLTPFLSSKLKIHDTCGIHNLHGIPGFLXXXXXXXXXXXXGEKGRQYYTNTKDGSDEWSLKKQGGYQIXXXXXXXXXXXIGGIITGFIMK-HLDGTESQNDFFDDNYEFLTPEEE 1291
            + +F +     +I ++ LF  +VEY+         N+ +  +     + YP FQDVHVM+F G GFLMTFLK+YGF S+  N L+ A+ +QW T+V        +K +      I +  ++ +DF++A VLIS+GAVLGK S  Q+L+M ILE V FA +E ++ +    SDIG S+ IH F AYFG+AV+ ++   G    +  E S   SDLF+M GT+FLW++WPSFNS +    D   Q RAI+NTYFSLAACV+T    S +++ R K++MVHIQNATLAGGVAVG  AD+ I P+G+++IG IA + SVLGY +LTP  ++KL+IHDTCG+HNLHG+PG +               G         G+   S+  Q      A   S   AV+GG++TG I+K  L G  S  + +DD+  +  P+  
Sbjct:    2 RFTFPLMAIVLEIAMIVLFGLFVEYETDQTVLEQLNITKPTDMGIFFELYPLFQDVHVMIFVGFGFLMTFLKKYGFSSVGINLLVAALGLQWGTIVQGILQSQGQKFN------IGIKNMINADFSAATVLISFGAVLGKTSPTQMLIMTILEIVFFAHNEYLVSEIFKASDIGASMTIHAFGAYFGLAVAGILYRSGLRKGHENEESAYYSDLFAMIGTLFLWMFWPSFNSAIAEPGDK--QCRAIVNTYFSLAACVLTAFAFSSLVEHRGKLNMVHIQNATLAGGVAVGTCADMAIHPFGSMIIGSIAGMVSVLGYKFLTPLFTTKLRIHDTCGVHNLHGLPGVV--------------GGLAGIVAVAMGASNTSMAMQAA----ALGSSIGTAVVGGLMTGLILKLPLWGQPSDQNCYDDSVYWKVPKTR 409
The following BLAST results are available for this feature:
BLAST of TCONS_00024793 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RHAG1.519e-9742.40Ammonium transporter Rh type A OS=Homo sapiens GN=... [more]
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