TCONS_00024832 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024832
Unique NameTCONS_00024832
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3836

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024832 ID=TCONS_00024832|Name=TCONS_00024832|organism=Clytia hemisphaerica|type=transcript|length=3836bp
TCGAGACTTTGAGGAAGAGTGTTTACGACAATGTGAGAAATATACTTGTT
TCTTCACTGACACAATCAAGATGGAATATCCAAAACTTATCAACTTGTTG
ATCTTCGTCGTGACATTGCTACCATCTCTGGTCAAGACCCAATGCCCATC
AAAATGTTCTTGTTCTGGTGATTTAGCTTACTGCGAAAATCAATTTCTCA
CATCCATTCCAAACGGTTTTGGATCTAGCATTCGAAGACTTTACCTCGGT
GCAAACTTCATCGAAACCATCAACAAAGGTGATTTACCTGATCTACCAGG
TCTAGAGATACTTGGACTTCAAAATAATAAACTCACATACATCCAGGATG
AAGCTTTCTCTGGTTACACTTCATTGGTGCAGCTTCATTTGAATAATAAC
TTTCTCCGACGTATCAGTAATAGCACATTCAAGGGTTTGGAGAATGTCAT
CATATTGAATCTACATAACCAACTAACTGATAATTCGTTGTTTATTGATG
ATTACACTTTTGGAAATATGTCAAATCTGAATGAACTGAATCTgcaaaat
acaaatttaaaacaaattacAGACCATACTCTAGATGGTTTCAAACGTGG
TGCTTTATATCTCCAAGGACAAGATATCCATAGATTTTCACCATATGCCT
TTAGTGGAATCCACAACGATGCTAGCATATTTATTGATAGTAAAACATCA
CGGCTCTGTTGTTGTGAATCTAAAATGGCTATATCTGACACTTCACTATC
ATTGAATTGTATCAAAAATGatgtaacttttgatctaagAACAGTAGAAT
GTGTAAATGATGGGTATTGCCAAAATACCAGCAAAACAACTTGTTCATCA
TTggaaatattaacagaatcttTGACAATTGTGGAAGAATCGTATACAAT
TTCCTCAAAGGCAAAGGCGTCTGAATTAGTATCTACCTTTTCACATACTA
CCTCAGCAATTCAAAGATTATCGAGTGTATCCTCTTCAATTTCTACAAAT
ACTCAACGAAATATAATTCCAACATCAAGCAAAAATACTATGCTTACCTC
ACTGCAGAAAATTTCTTTACCAAAATATCCAGAGTCTTTTTCTCCAAGAT
CTTCAGTACTGATTGCATTTGATCAACACCAAAGCTCTGTGTTAACCATA
CATTCTTCATTGAATTCGATGGAAACATCAAGCCTACCAAAACCAGCGAC
AACAACAGCTACCACACATCAAAATGTCAAGTTTCATTCGTCAAACTTAC
CAACGCCGTCACTATATATTCGTACTAAAGACGACATTATTAGATCTTTC
AGCTCTTTGGGAAACAATTTTCAGCATTCAAAATATCTTGCCAACAATCA
AATATCAAGCCATTCGACACATCTCTCAACATCTGCACATCTTCAAGACT
TTCAAAGTTACACAACTGATTTGAATTTTGCTCAAATATCAGGATCACCG
ACCGCATTCAATGCGTTATCTAATCAAGAAACGAGGATAAGAACTTCCAT
TATTGATTCATCAACACTTCCGATCGACCAGATTTCTAGTCATCTCAACA
AAACAGTGACAGCATCGGTTAAAACTAGCAAATTAGGTCTTCCAATCATC
CAGTCTTTCACCAGTAAAGATTCAGTCATAAAAATTTCTTCTAAACATTC
TCAAACTGACATGTTCTTATCGCCAACCCTAGTCTCAGAGAAAACAGAAA
AGCAAACGCATTTACCAATGAAATCGTCTTTGTTGAGCTTGAACCAAACT
TCGAATTCTATCACCATGAATGTGTCTTTTAACACTGAAAATCATTTAAC
CGAAGATACAGAAATCAATAATAATGGAGAAACAAAAAGGATTGTACTTT
CACCATCATCAACAATCTTTACACTGCCGATAACACCGTCTAGTTTGTCA
TCACAAATCCTCGATCAAGTCTTACCAAGCTCTTCATTCGTTAAGGAGGA
TACAACTTCGGCTAGCTCAGCCTCACAAAATAATGGAGCCCTACCAACTC
CGATATTggaatcttcattttcattcattaagGAGAACACAATTTTGGCA
ACCTTCCCTTTACACTTTTTAACTTCAATAGAAACTGAACGATCACcaac
aaaactgttatcgtcaAATCCACCCAATGAGAATGAAGACCTCGACACAC
GGTCTAAAATTATCGGAGAACAAATAATTATATCATCGAAAATCAAACTA
ACATCAGACGCAACTCCTTCGCTTAACAAATTGGATGAAGACTATTCAGA
AATATCATCTATCAAAGGCCTATTTATTCAAAGATCAAGAATCGGTTCAA
GTTCAGAAAACCTGGTAGCTACACCTAGTCAGCAACCCAGCATATCCATC
TCAATAATACGTAATCAAGAACCTCAAAATCGAATTTCTGAAGATCGATC
TGGAGCCACCCTCAAACCAAGACAATCGTCGTCAGATATAGAGTTATCAA
CAATACAAGAAAATCCAAGACTTTTATCACAAACCATATCAACCAATTTA
AGAGACCAATCTTCAGTTATTTCACCAAGCGGAGGTTATTTGCTGAAATC
TTCGCCAATGTCAACAAACACTTCAACATTGTCAATCAATCAAGTTTATC
AACAAAGTCAGCAACTCCCCGTCATATCAAATGCCCCTAATTCTTCAACA
GCAGATCatgaattatcaaaatattcaacaatGTACAGACGACAGATTCT
CAATAAGACCATCATCTCATTAGAATCAATATCAATAAATAGCTCGTCAA
TCGAATCAACGGCAAATCAAGATCAATTAAGCCGAACGCCTACAATAGCT
CAAACAACGGTCCAACGTCAGACGGAAAGATTCACCGAGCAACCTACCAA
AAAACCAGCACAACAAGACGTAAAAGCAGGTTTCAGCCAACAGCCCGCTG
ATGATGAAAACGATACAAACATTCTCTTGGGTGTTTTCCTTACATTTGGT
GCTTTTGGTCTTCTAATTGGAATTCTGGTAATGTACAAAAAAAGGCGGTC
GATTTTATCGCAAAGTGTCGACCTGAGATATTGATTATGGTGAATGATTT
ACAAACCTTTGACTTCCAACATAGACTTGGGCTATGTATTGTCTATCAGC
CTGCTGAAGACCACACTTATCCTGAAAGAGCATACCTTAGAATGGCTAAA
CCCTCTCATTCCCGGTGATAATTCTCCGATTGCCACTTTACAACAGCAGA
AGGCCAGCACTCTTTGTACGTACAAAAAGAGCTTCAACTTGTCAAGTGGT
TAGTCTCAAGGCCGTTGAGTGCTGTCTACGTTATATATGCAGCATTTATG
TCGGTACGCCCAGAAAAACAGCTGAAATATCGCGTTAGAAATGCTTCCTC
GGGAATGAAAAAGTTTAGCTATCCCACGGTATCATTTGAAGcataaatat
ataaaaaattgtattttgtttCCCTTATGTATCATAATTTAATAATGGAG
TCGTATCTAAAACGACAACTACCATAGCTTTGCTATTTCATGATCGTAGA
ATCAACAATCTAAAGGAGTATGATTTCCATCGCACAAAGTTCCAATCACA
TGAGATGCAAAattaatttgttaaaaaaaacttcaactATACGCCAGGGT
CAAGCATCAACACTGTGGAAGAAGATTGGTTTAATTTGTATATATAtcgg
cggaagcggggagacctACAGTCTCCCCACTCTTACGGTTGTTCATAAGA
TTATTAAATGCGATGAAAAAATGCAAATGAAAAAGTGACCCGGTTTCAGA
AGGATAAGGAAGTGTTGATTTTAAGTTAAGCCGTTTTTAAAACAAACAAG
TCAAACATTTTTACAGCTTTTAATTTTGAAACCAAA
Run BLAST on NCBI

protein sequence of TCONS_00024832-protein

>TCONS_00024832-protein ID=TCONS_00024832-protein|Name=TCONS_00024832-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1010bp
RDFEEECLRQCEKYTCFFTDTIKMEYPKLINLLIFVVTLLPSLVKTQCPS
KCSCSGDLAYCENQFLTSIPNGFGSSIRRLYLGANFIETINKGDLPDLPG
LEILGLQNNKLTYIQDEAFSGYTSLVQLHLNNNFLRRISNSTFKGLENVI
ILNLHNQLTDNSLFIDDYTFGNMSNLNELNLQNTNLKQITDHTLDGFKRG
ALYLQGQDIHRFSPYAFSGIHNDASIFIDSKTSRLCCCESKMAISDTSLS
LNCIKNDVTFDLRTVECVNDGYCQNTSKTTCSSLEILTESLTIVEESYTI
SSKAKASELVSTFSHTTSAIQRLSSVSSSISTNTQRNIIPTSSKNTMLTS
LQKISLPKYPESFSPRSSVLIAFDQHQSSVLTIHSSLNSMETSSLPKPAT
TTATTHQNVKFHSSNLPTPSLYIRTKDDIIRSFSSLGNNFQHSKYLANNQ
ISSHSTHLSTSAHLQDFQSYTTDLNFAQISGSPTAFNALSNQETRIRTSI
IDSSTLPIDQISSHLNKTVTASVKTSKLGLPIIQSFTSKDSVIKISSKHS
QTDMFLSPTLVSEKTEKQTHLPMKSSLLSLNQTSNSITMNVSFNTENHLT
EDTEINNNGETKRIVLSPSSTIFTLPITPSSLSSQILDQVLPSSSFVKED
TTSASSASQNNGALPTPILESSFSFIKENTILATFPLHFLTSIETERSPT
KLLSSNPPNENEDLDTRSKIIGEQIIISSKIKLTSDATPSLNKLDEDYSE
ISSIKGLFIQRSRIGSSSENLVATPSQQPSISISIIRNQEPQNRISEDRS
GATLKPRQSSSDIELSTIQENPRLLSQTISTNLRDQSSVISPSGGYLLKS
SPMSTNTSTLSINQVYQQSQQLPVISNAPNSSTADHELSKYSTMYRRQIL
NKTIISLESISINSSSIESTANQDQLSRTPTIAQTTVQRQTERFTEQPTK
KPAQQDVKAGFSQQPADDENDTNILLGVFLTFGAFGLLIGILVMYKKRRS
ILSQSVDLRY
Run BLAST on NCBI

transcript from alignment at sc0000511:191764..196078-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024832 ID=TCONS_00024832|Name=TCONS_00024832|organism=Clytia hemisphaerica|type=transcript|length=4315bp|location=Sequence derived from alignment at sc0000511:191764..196078- (Clytia hemisphaerica)
TCGAGACTTTGAGGAAGAGTGTTTACGACAATGTGAGAAATATACTTGTT TCTTCACTGACACAATCAAGGTAAGCTAACGAAACTGTCAGGGTGAAAAA TAACGAAAGATTTGCTGTTCTAAATGCCACCGTCTGTTTAATTTTAAAAA GCCTCAAATCAGTGTATTGTAACTTAAGTAGAAGTGAAGGGTAGGGAGAA ATCTTTAACCTTTCTTCGGCGAGCAAAAGTTATGCCATGAGGTTCGCGCC GAATTTCGTTTGCTAACAGATTGAATACATATATCTTTGATTTAGTTTTT TATATTTTTCAAATTCTGGCAAGAAATTTAACGTACGCAATCTTGCGTTT GTATGAAAAGCACCCGGGACCCTTCGCAAGTAATGTAAGGAATAAGTGAC TTTGAATTCTACATAAAAGATTAGCTCTAGCTTTCGGCTAAATCTTATTG CAGTAAAACCTTCTCTCGAATCCTCGATTTTGAAAAGCGCTAGTCACCGT TTCATCCAGAATGTAAAATTTTCTTTTGATCAAATCTTTTTTGTTTAAGA TGGAATATCCAAAACTTATCAACTTGTTGATCTTCGTCGTGACATTGCTA CCATCTCTGGTCAAGACCCAATGCCCATCAAAATGTTCTTGTTCTGGTGA TTTAGCTTACTGCGAAAATCAATTTCTCACATCCATTCCAAACGGTTTTG GATCTAGCATTCGAAGACTTTACCTCGGTGCAAACTTCATCGAAACCATC AACAAAGGTGATTTACCTGATCTACCAGGTCTAGAGATACTTGGACTTCA AAATAATAAACTCACATACATCCAGGATGAAGCTTTCTCTGGTTACACTT CATTGGTGCAGCTTCATTTGAATAATAACTTTCTCCGACGTATCAGTAAT AGCACATTCAAGGGTTTGGAGAATGTCATCATATTGAATCTACATAACCA ACTAACTGATAATTCGTTGTTTATTGATGATTACACTTTTGGAAATATGT CAAATCTGAATGAACTGAATCTGCAAAATACAAATTTAAAACAAATTACA GACCATACTCTAGATGGTTTCAAACGTGGTGCTTTATATCTCCAAGGACA AGATATCCATAGATTTTCACCATATGCCTTTAGTGGAATCCACAACGATG CTAGCATATTTATTGATAGTAAAACATCACGGCTCTGTTGTTGTGAATCT AAAATGGCTATATCTGACACTTCACTATCATTGAATTGTATCAAAAATGA TGTAACTTTTGATCTAAGAACAGTAGAATGTGTAAATGATGGGTATTGCC AAAATACCAGCAAAACAACTTGTTCATCATTGGAAATATTAACAGAATCT TTGACAATTGTGGAAGAATCGTATACAATTTCCTCAAAGGCAAAGGCGTC TGAATTAGTATCTACCTTTTCACATACTACCTCAGCAATTCAAAGATTAT CGAGTGTATCCTCTTCAATTTCTACAAATACTCAACGAAATATAATTCCA ACATCAAGCAAAAATACTATGCTTACCTCACTGCAGAAAATTTCTTTACC AAAATATCCAGAGTCTTTTTCTCCAAGATCTTCAGTACTGATTGCATTTG ATCAACACCAAAGCTCTGTGTTAACCATACATTCTTCATTGAATTCGATG GAAACATCAAGCCTACCAAAACCAGCGACAACAACAGCTACCACACATCA AAATGTCAAGTTTCATTCGTCAAACTTACCAACGCCGTCACTATATATTC GTACTAAAGACGACATTATTAGATCTTTCAGCTCTTTGGGAAACAATTTT CAGCATTCAAAATATCTTGCCAACAATCAAATATCAAGCCATTCGACACA TCTCTCAACATCTGCACATCTTCAAGACTTTCAAAGTTACACAACTGATT TGAATTTTGCTCAAATATCAGGATCACCGACCGCATTCAATGCGTTATCT AATCAAGAAACGAGGATAAGAACTTCCATTATTGATTCATCAACACTTCC GATCGACCAGATTTCTAGTCATCTCAACAAAACAGTGACAGCATCGGTTA AAACTAGCAAATTAGGTCTTCCAATCATCCAGTCTTTCACCAGTAAAGAT TCAGTCATAAAAATTTCTTCTAAACATTCTCAAACTGACATGTTCTTATC GCCAACCCTAGTCTCAGAGAAAACAGAAAAGCAAACGCATTTACCAATGA AATCGTCTTTGTTGAGCTTGAACCAAACTTCGAATTCTATCACCATGAAT GTGTCTTTTAACACTGAAAATCATTTAACCGAAGATACAGAAATCAATAA TAATGGAGAAACAAAAAGGATTGTACTTTCACCATCATCAACAATCTTTA CACTGCCGATAACACCGTCTAGTTTGTCATCACAAATCCTCGATCAAGTC TTACCAAGCTCTTCATTCGTTAAGGAGGATACAACTTCGGCTAGCTCAGC CTCACAAAATAATGGAGCCCTACCAACTCCGATATTGGAATCTTCATTTT CATTCATTAAGGAGAACACAATTTTGGCAACCTTCCCTTTACACTTTTTA ACTTCAATAGAAACTGAACGATCACCAACAAAACTGTTATCGTCAAATCC ACCCAATGAGAATGAAGACCTCGACACACGGTCTAAAATTATCGGAGAAC AAATAATTATATCATCGAAAATCAAACTAACATCAGACGCAACTCCTTCG CTTAACAAATTGGATGAAGACTATTCAGAAATATCATCTATCAAAGGCCT ATTTATTCAAAGATCAAGAATCGGTTCAAGTTCAGAAAACCTGGTAGCTA CACCTAGTCAGCAACCCAGCATATCCATCTCAATAATACGTAATCAAGAA CCTCAAAATCGAATTTCTGAAGATCGATCTGGAGCCACCCTCAAACCAAG ACAATCGTCGTCAGATATAGAGTTATCAACAATACAAGAAAATCCAAGAC TTTTATCACAAACCATATCAACCAATTTAAGAGACCAATCTTCAGTTATT TCACCAAGCGGAGGTTATTTGCTGAAATCTTCGCCAATGTCAACAAACAC TTCAACATTGTCAATCAATCAAGTTTATCAACAAAGTCAGCAACTCCCCG TCATATCAAATGCCCCTAATTCTTCAACAGCAGATCATGAATTATCAAAA TATTCAACAATGTACAGACGACAGATTCTCAATAAGACCATCATCTCATT AGAATCAATATCAATAAATAGCTCGTCAATCGAATCAACGGCAAATCAAG ATCAATTAAGCCGAACGCCTACAATAGCTCAAACAACGGTCCAACGTCAG ACGGAAAGATTCACCGAGCAACCTACCAAAAAACCAGCACAACAAGACGT AAAAGCAGGTTTCAGCCAACAGCCCGCTGATGATGAAAACGATACAAACA TTCTCTTGGGTGTTTTCCTTACATTTGGTGCTTTTGGTCTTCTAATTGGA ATTCTGGTAATGTACAAAAAAAGGCGGTCGATTTTATCGCAAAGTGTCGA CCTGAGATATTGATTATGGTGAATGATTTACAAACCTTTGACTTCCAACA TAGACTTGGGCTATGTATTGTCTATCAGCCTGCTGAAGACCACACTTATC CTGAAAGAGCATACCTTAGAATGGCTAAACCCTCTCATTCCCGGTGATAA TTCTCCGATTGCCACTTTACAACAGCAGAAGGCCAGCACTCTTTGTACGT ACAAAAAGAGCTTCAACTTGTCAAGTGGTTAGTCTCAAGGCCGTTGAGTG CTGTCTACGTTATATATGCAGCATTTATGTCGGTACGCCCAGAAAAACAG CTGAAATATCGCGTTAGAAATGCTTCCTCGGGAATGAAAAAGTTTAGCTA TCCCACGGTATCATTTGAAGCATAAATATATAAAAAATTGTATTTTGTTT CCCTTATGTATCATAATTTAATAATGGAGTCGTATCTAAAACGACAACTA CCATAGCTTTGCTATTTCATGATCGTAGAATCAACAATCTAAAGGAGTAT GATTTCCATCGCACAAAGTTCCAATCACATGAGATGCAAAATTAATTTGT TAAAAAAAACTTCAACTATACGCCAGGGTCAAGCATCAACACTGTGGAAG AAGATTGGTTTAATTTGTATATATATCGGCGGAAGCGGGGAGACCTACAG TCTCCCCACTCTTACGGTTGTTCATAAGATTATTAAATGCGATGAAAAAA TGCAAATGAAAAAGTGACCCGGTTTCAGAAGGATAAGGAAGTGTTGATTT TAAGTTAAGCCGTTTTTAAAACAAACAAGTCAAACATTTTTACAGCTTTT AATTTTGAAACCAAA

Coding sequence (CDS) from alignment at sc0000511:191764..196078-

>TCONS_00024832 ID=TCONS_00024832|Name=TCONS_00024832|organism=Clytia hemisphaerica|type=CDS|length=6066bp|location=Sequence derived from alignment at sc0000511:191764..196078- (Clytia hemisphaerica)
ATGGAATATCCAAAACTTATCAACTTGTTGATCTTCGTCGTGACATTGCT
ACCATCTCTGGTCAAGACCCAATGCCCATCAAAATGTTCTTGTTCTGGTG
ATTTAGCTTACTGCGAAAATCAATTTCTCACATCCATTCCAAACGGTTTT
GGATCTAGCATTCGAAGACTTTACCTCGGTGCAAACTTCATCGAAACCAT
CAACAAAGGTGATTTACCTGATCTACCAGGTCTAGAGATACTTGGACTTC
AAAATAATAAACTCACATACATCCAGGATGAAGCTTTCTCTGGTTACACT
TCATTGGTGCAGCTTCATTTGAATAATAACTTTCTCCGACGTATCAGTAA
TAGCACATTCAAGGGTTTGGAGAATGTCATCATATTGAATCTACATAACC
AACTAACTGATAATTCGTTGTTTATTGATGATTACACTTTTGGAAATATG
TCAAATCTGAATGAACTGAATCTGCAAAATACAAATTTAAAACAAATTAC
AGACCATACTCTAGATGGTTTCAAACGTGGTGCTTTATATCTCCAAGGAC
AAGATATCCATAGATTTTCACCATATGCCTTTAGTGGAATCCACAACGAT
GCTAGCATATTTATTGATAGTAAAACATCACGGCTCTGTTGTTGTGAATC
TAAAATGGCTATATCTGACACTTCACTATCATTGAATTGTATCAAAAATG
ATGTAACTTTTGATCTAAGAACAGTAGAATGTGTAAATGATGGGTATTGC
CAAAATACCAGCAAAACAACTTGTTCATCATTGGAAATATTAACAGAATC
TTTGACAATTGTGGAAGAATCGTATACAATTTCCTCAAAGGCAAAGGCGT
CTGAATTAGTATCTACCTTTTCACATACTACCTCAGCAATTCAAAGATTA
TCGAGTGTATCCTCTTCAATTTCTACAAATACTCAACGAAATATAATTCC
AACATCAAGCAAAAATACTATGCTTACCTCACTGCAGAAAATTTCTTTAC
CAAAATATCCAGAGTCTTTTTCTCCAAGATCTTCAGTACTGATTGCATTT
GATCAACACCAAAGCTCTGTGTTAACCATACATTCTTCATTGAATTCGAT
GGAAACATCAAGCCTACCAAAACCAGCGACAACAACAGCTACCACACATC
AAAATGTCAAGTTTCATTCGTCAAACTTACCAACGCCGTCACTATATATT
CGTACTAAAGACGACATTATTAGATCTTTCAGCTCTTTGGGAAACAATTT
TCAGCATTCAAAATATCTTGCCAACAATCAAATATCAAGCCATTCGACAC
ATCTCTCAACATCTGCACATCTTCAAGACTTTCAAAGTTACACAACTGAT
TTGAATTTTGCTCAAATATCAGGATCACCGACCGCATTCAATGCGTTATC
TAATCAAGAAACGAGGATAAGAACTTCCATTATTGATTCATCAACACTTC
CGATCGACCAGATTTCTAGTCATCTCAACAAAACAGTGACAGCATCGGTT
AAAACTAGCAAATTAGGTCTTCCAATCATCCAGTCTTTCACCAGTAAAGA
TTCAGTCATAAAAATTTCTTCTAAACATTCTCAAACTGACATGTTCTTAT
CGCCAACCCTAGTCTCAGAGAAAACAGAAAAGCAAACGCATTTACCAATG
AAATCGTCTTTGTTGAGCTTGAACCAAACTTCGAATTCTATCACCATGAA
TGTGTCTTTTAACACTGAAAATCATTTAACCGAAGATACAGAAATCAATA
ATAATGGAGAAACAAAAAGGATTGTACTTTCACCATCATCAACAATCTTT
ACACTGCCGATAACACCGTCTAGTTTGTCATCACAAATCCTCGATCAAGT
CTTACCAAGCTCTTCATTCGTTAAGGAGGATACAACTTCGGCTAGCTCAG
CCTCACAAAATAATGGAGCCCTACCAACTCCGATATTGGAATCTTCATTT
TCATTCATTAAGGAGAACACAATTTTGGCAACCTTCCCTTTACACTTTTT
AACTTCAATAGAAACTGAACGATCACCAACAAAACTGTTATCGTCAAATC
CACCCAATGAGAATGAAGACCTCGACACACGGTCTAAAATTATCGGAGAA
CAAATAATTATATCATCGAAAATCAAACTAACATCAGACGCAACTCCTTC
GCTTAACAAATTGGATGAAGACTATTCAGAAATATCATCTATCAAAGGCC
TATTTATTCAAAGATCAAGAATCGGTTCAAGTTCAGAAAACCTGGTAGCT
ACACCTAGTCAGCAACCCAGCATATCCATCTCAATAATACGTAATCAAGA
ACCTCAAAATCGAATTTCTGAAGATCGATCTGGAGCCACCCTCAAACCAA
GACAATCGTCGTCAGATATAGAGTTATCAACAATACAAGAAAATCCAAGA
CTTTTATCACAAACCATATCAACCAATTTAAGAGACCAATCTTCAGTTAT
TTCACCAAGCGGAGGTTATTTGCTGAAATCTTCGCCAATGTCAACAAACA
CTTCAACATTGTCAATCAATCAAGTTTATCAACAAAGTCAGCAACTCCCC
GTCATATCAAATGCCCCTAATTCTTCAACAGCAGATCATGAATTATCAAA
ATATTCAACAATGTACAGACGACAGATTCTCAATAAGACCATCATCTCAT
TAGAATCAATATCAATAAATAGCTCGTCAATCGAATCAACGGCAAATCAA
GATCAATTAAGCCGAACGCCTACAATAGCTCAAACAACGGTCCAACGTCA
GACGGAAAGATTCACCGAGCAACCTACCAAAAAACCAGCACAACAAGACG
TAAAAGCAGGTTTCAGCCAACAGCCCGCTGATGATGAAAACGATACAAAC
ATTCTCTTGGGTGTTTTCCTTACATTTGGTGCTTTTGGTCTTCTAATTGG
AATTCTGGTAATGTACAAAAAAAGGCGGTCGATTTTATCGCAAAGTGTCG
ACCTGAGATATTGACGAGACTTTGAGGAAGAGTGTTTACGACAATGTGAG
AAATATACTTGTTTCTTCACTGACACAATCAAGATGGAATATCCAAAACT
TATCAACTTGTTGATCTTCGTCGTGACATTGCTACCATCTCTGGTCAAGA
CCCAATGCCCATCAAAATGTTCTTGTTCTGGTGATTTAGCTTACTGCGAA
AATCAATTTCTCACATCCATTCCAAACGGTTTTGGATCTAGCATTCGAAG
ACTTTACCTCGGTGCAAACTTCATCGAAACCATCAACAAAGGTGATTTAC
CTGATCTACCAGGTCTAGAGATACTTGGACTTCAAAATAATAAACTCACA
TACATCCAGGATGAAGCTTTCTCTGGTTACACTTCATTGGTGCAGCTTCA
TTTGAATAATAACTTTCTCCGACGTATCAGTAATAGCACATTCAAGGGTT
TGGAGAATGTCATCATATTGAATCTACATAACCAACTAACTGATAATTCG
TTGTTTATTGATGATTACACTTTTGGAAATATGTCAAATCTGAATGAACT
GAATCTGCAAAATACAAATTTAAAACAAATTACAGACCATACTCTAGATG
GTTTCAAACGTGGTGCTTTATATCTCCAAGGACAAGATATCCATAGATTT
TCACCATATGCCTTTAGTGGAATCCACAACGATGCTAGCATATTTATTGA
TAGTAAAACATCACGGCTCTGTTGTTGTGAATCTAAAATGGCTATATCTG
ACACTTCACTATCATTGAATTGTATCAAAAATGATGTAACTTTTGATCTA
AGAACAGTAGAATGTGTAAATGATGGGTATTGCCAAAATACCAGCAAAAC
AACTTGTTCATCATTGGAAATATTAACAGAATCTTTGACAATTGTGGAAG
AATCGTATACAATTTCCTCAAAGGCAAAGGCGTCTGAATTAGTATCTACC
TTTTCACATACTACCTCAGCAATTCAAAGATTATCGAGTGTATCCTCTTC
AATTTCTACAAATACTCAACGAAATATAATTCCAACATCAAGCAAAAATA
CTATGCTTACCTCACTGCAGAAAATTTCTTTACCAAAATATCCAGAGTCT
TTTTCTCCAAGATCTTCAGTACTGATTGCATTTGATCAACACCAAAGCTC
TGTGTTAACCATACATTCTTCATTGAATTCGATGGAAACATCAAGCCTAC
CAAAACCAGCGACAACAACAGCTACCACACATCAAAATGTCAAGTTTCAT
TCGTCAAACTTACCAACGCCGTCACTATATATTCGTACTAAAGACGACAT
TATTAGATCTTTCAGCTCTTTGGGAAACAATTTTCAGCATTCAAAATATC
TTGCCAACAATCAAATATCAAGCCATTCGACACATCTCTCAACATCTGCA
CATCTTCAAGACTTTCAAAGTTACACAACTGATTTGAATTTTGCTCAAAT
ATCAGGATCACCGACCGCATTCAATGCGTTATCTAATCAAGAAACGAGGA
TAAGAACTTCCATTATTGATTCATCAACACTTCCGATCGACCAGATTTCT
AGTCATCTCAACAAAACAGTGACAGCATCGGTTAAAACTAGCAAATTAGG
TCTTCCAATCATCCAGTCTTTCACCAGTAAAGATTCAGTCATAAAAATTT
CTTCTAAACATTCTCAAACTGACATGTTCTTATCGCCAACCCTAGTCTCA
GAGAAAACAGAAAAGCAAACGCATTTACCAATGAAATCGTCTTTGTTGAG
CTTGAACCAAACTTCGAATTCTATCACCATGAATGTGTCTTTTAACACTG
AAAATCATTTAACCGAAGATACAGAAATCAATAATAATGGAGAAACAAAA
AGGATTGTACTTTCACCATCATCAACAATCTTTACACTGCCGATAACACC
GTCTAGTTTGTCATCACAAATCCTCGATCAAGTCTTACCAAGCTCTTCAT
TCGTTAAGGAGGATACAACTTCGGCTAGCTCAGCCTCACAAAATAATGGA
GCCCTACCAACTCCGATATTGGAATCTTCATTTTCATTCATTAAGGAGAA
CACAATTTTGGCAACCTTCCCTTTACACTTTTTAACTTCAATAGAAACTG
AACGATCACCAACAAAACTGTTATCGTCAAATCCACCCAATGAGAATGAA
GACCTCGACACACGGTCTAAAATTATCGGAGAACAAATAATTATATCATC
GAAAATCAAACTAACATCAGACGCAACTCCTTCGCTTAACAAATTGGATG
AAGACTATTCAGAAATATCATCTATCAAAGGCCTATTTATTCAAAGATCA
AGAATCGGTTCAAGTTCAGAAAACCTGGTAGCTACACCTAGTCAGCAACC
CAGCATATCCATCTCAATAATACGTAATCAAGAACCTCAAAATCGAATTT
CTGAAGATCGATCTGGAGCCACCCTCAAACCAAGACAATCGTCGTCAGAT
ATAGAGTTATCAACAATACAAGAAAATCCAAGACTTTTATCACAAACCAT
ATCAACCAATTTAAGAGACCAATCTTCAGTTATTTCACCAAGCGGAGGTT
ATTTGCTGAAATCTTCGCCAATGTCAACAAACACTTCAACATTGTCAATC
AATCAAGTTTATCAACAAAGTCAGCAACTCCCCGTCATATCAAATGCCCC
TAATTCTTCAACAGCAGATCATGAATTATCAAAATATTCAACAATGTACA
GACGACAGATTCTCAATAAGACCATCATCTCATTAGAATCAATATCAATA
AATAGCTCGTCAATCGAATCAACGGCAAATCAAGATCAATTAAGCCGAAC
GCCTACAATAGCTCAAACAACGGTCCAACGTCAGACGGAAAGATTCACCG
AGCAACCTACCAAAAAACCAGCACAACAAGACGTAAAAGCAGGTTTCAGC
CAACAGCCCGCTGATGATGAAAACGATACAAACATTCTCTTGGGTGTTTT
CCTTACATTTGGTGCTTTTGGTCTTCTAATTGGAATTCTGGTAATGTACA
AAAAAAGGCGGTCGATTTTATCGCAAAGTGTCGACCTGAGATATTGACGA
GACTTTGAGGAAGAGTGTTTACGACAATGTGAGAAATATACTTGTTTCTT
CACTGACACAATCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013957XLOC_013957Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024832-proteinTCONS_00024832-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024832-exon-sc0000511-1575043694:196009..196078TCONS_00024832-exon-sc0000511-1575043694:196009..196078Clytia hemisphaericaexon
TCONS_00024832-exon-sc0000511-1575043694:191764..195529TCONS_00024832-exon-sc0000511-1575043694:191764..195529Clytia hemisphaericaexon
TCONS_00024832-exon-sc0000511-1510915933:196009..196078TCONS_00024832-exon-sc0000511-1510915933:196009..196078Clytia hemisphaericaexon
TCONS_00024832-exon-sc0000511-1510915933:191764..195529TCONS_00024832-exon-sc0000511-1510915933:191764..195529Clytia hemisphaericaexon
TCONS_00024832-exon-sc0000511-1491911889:196009..196078TCONS_00024832-exon-sc0000511-1491911889:196009..196078Clytia hemisphaericaexon
TCONS_00024832-exon-sc0000511-1491911889:191764..195529TCONS_00024832-exon-sc0000511-1491911889:191764..195529Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000511supercontigsc0000511:191764..196078 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.0659549 0.0104237 0.251515 0.247239 0.148369 0.193989 0.148651 0.436469 0.117097 0.0270237 0.0222172 0.0417243 0.257004 0.316106 0.010398 0 0.879536 0.802658 0.302814 0.397659 0.357069 0.674843 0 0 0 0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675L_dom-like
IPR001611Leu-rich_rpt
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00024832 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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