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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00025615 ID=TCONS_00025615|Name=TCONS_00025615|organism=Clytia hemisphaerica|type=transcript|length=1303bp
CACCAATCGGTAGATTTCGTTACAAGCGTGCACCGCAAGGCTTCTTATCT
TCAGGTGATGGTTACAACCGACGTTTCGACACCATCCTGACAGACTTTAA
CCGCAAAGAACGTATTGTTGACGACACCCTTCACTATGACACTGACTTAA
ANAATTGCATCCGCCACTGAAGAATTTCTCAAGCGCTGGGGTGTATCTCA
TATATTGTCATCTGCATACTACCCACAATCGAACGGACGTGCCGAAGTAG
CAGTCAAATCTACCAAACGACTCCTCCGTGCCAACACCGGCCCATCAGGA
TCACTGGACACCGATAGATTTCTTCGAGCGATGATGCAGATGAGAAACAC
ACCCGATCCTGATTGCAACATCTCACCAGCACAGATTGTCTTTGGCAGAC
CCATCAGAGATGCCTTCGCGTTCGTCAACCGTCTGATCAAGTATGGGAAA
AGAAAGAGTTATCAATGCGAAAACGTTACTTCCACTCCATCGAGAAGCTA
GACGATAAGATAGTGAAACTTCCTCCTCTTCAACCTGGTGACCGTTGCTA
CATCCAGAACTAATCAGGCAACTACCCTAAACGTTGGGACCGCTCTGGAA
CAGTTGTTGAAGTCCATGGATTTGAGAGCTACACGTTAAAGGTTGATGGC
TCTGGTCGAACTACTAAGCGTAATCGAAAGCATCTTCGTCGTTTCTCACC
CATCGATAGTGGTCCAAATCACAAATCAACTCCACCATCGTTGCCAGCTC
CAAAATCAACGCGTTTATCTTCAATTCCGCCTTCCGTACCGTTACAGCCA
TCATCGATAGCGACTCCGTCATTGCAACCAACTGCATCTGTACCACTGCA
GATCCCTTCTCATAACGACAGCCCACCAGACGTTCAATTCCAGATTGATA
CCACACCGCCTGTGGTCGTCCCATCGACACCCAACCCATTTATGTCCCCC
ATCCCAACGGGACAGGGTCAAGTAGATACTGTGCCATCCCCCCAACCTAC
TGAACTACCATCACGACCAACCCGCGTCAGACGATCACCAAAGAAATATG
AACCCGAATCCGGTGAATGGGTTTAATTCGACTTCGTCGAACTGGAGGGG
GATGGAGAAGAGTGAACTGTATACCTCTTGTGAACTGTATATATTGACAA
ACTGATTAGGACTATACGTCCTTGTGCCATAATTATGGCCTCAtagtttt
taccttatttttcatatttcttctTGTCTTATATTTTTAGATCCAAACat
tctaaaaattaagaaaacatAAAAGTATTAATCAAATGAATGACTTTTGT
CCA Run BLAST on NCBI transcript from alignment at sc0000540:97369..98671 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00025615 ID=TCONS_00025615|Name=TCONS_00025615|organism=Clytia hemisphaerica|type=transcript|length=1303bp|location=Sequence derived from alignment at sc0000540:97369..98671 (Clytia hemisphaerica)
TGGACAAAAGTCATTCATTTGATTAATACTTTTatgttttcttaattttt
agaatGTTTGGATCTAAAAATATAAGACAagaagaaatatgaaaaataag
gtaaaaactaTGAGGCCATAATTATGGCACAAGGACGTATAGTCCTAATC
AGTTTGTCAATATATACAGTTCACAAGAGGTATACAGTTCACTCTTCTCC
ATCCCCCTCCAGTTCGACGAAGTCGAATTAAACCCATTCACCGGATTCGG
GTTCATATTTCTTTGGTGATCGTCTGACGCGGGTTGGTCGTGATGGTAGT
TCAGTAGGTTGGGGGGATGGCACAGTATCTACTTGACCCTGTCCCGTTGG
GATGGGGGACATAAATGGGTTGGGTGTCGATGGGACGACCACAGGCGGTG
TGGTATCAATCTGGAATTGAACGTCTGGTGGGCTGTCGTTATGAGAAGGG
ATCTGCAGTGGTACAGATGCAGTTGGTTGCAATGACGGAGTCGCTATCGA
TGATGGCTGTAACGGTACGGAAGGCGGAATTGAAGATAAACGCGTTGATT
TTGGAGCTGGCAACGATGGTGGAGTTGATTTGTGATTTGGACCACTATCG
ATGGGTGAGAAACGACGAAGATGCTTTCGATTACGCTTAGTAGTTCGACC
AGAGCCATCAACCTTTAACGTGTAGCTCTCAAATCCATGGACTTCAACAA
CTGTTCCAGAGCGGTCCCAACGTTTAGGGTAGTTGCCTGATTAGTTCTGG
ATGTAGCAACGGTCACCAGGTTGAAGAGGAGGAAGTTTCACTATCTTATC
GTCTAGCTTCTCGATGGAGTGGAAGTAACGTTTTCGCATTGATAACTCTT
TCTTTTCCCATACTTGATCAGACGGTTGACGAACGCGAAGGCATCTCTGA
TGGGTCTGCCAAAGACAATCTGTGCTGGTGAGATGTTGCAATCAGGATCG
GGTGTGTTTCTCATCTGCATCATCGCTCGAAGAAATCTATCGGTGTCCAG
TGATCCTGATGGGCCGGTGTTGGCACGGAGGAGTCGTTTGGTAGATTTGA
CTGCTACTTCGGCACGTCCGTTCGATTGTGGGTAGTATGCAGATGACAAT
ATATGAGATACACCCCAGCGCTTGAGAAATTCTTCAGTGGCGGATGCAAT
TNTTTAAGTCAGTGTCATAGTGAAGGGTGTCGTCAACAATACGTTCTTTG
CGGTTAAAGTCTGTCAGGATGGTGTCGAAACGTCGGTTGTAACCATCACC
TGAAGATAAGAAGCCTTGCGGTGCACGCTTGTAACGAAATCTACCGATTG
GTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00025615-exon-sc0000540-1491911889:97369..98671 | TCONS_00025615-exon-sc0000540-1491911889:97369..98671 | Clytia hemisphaerica | exon |
| TCONS_00025615-exon-sc0000540-1510915933:97369..98671 | TCONS_00025615-exon-sc0000540-1510915933:97369..98671 | Clytia hemisphaerica | exon |
| TCONS_00025615-exon-sc0000540-1575043694:97369..98671 | TCONS_00025615-exon-sc0000540-1575043694:97369..98671 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000540 | supercontig | sc0000540:97369..98671 . |
Blast
The following BLAST results are available for this feature:
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