TCONS_00025737 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025737
Unique NameTCONS_00025737
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length253

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025737 ID=TCONS_00025737|Name=TCONS_00025737|organism=Clytia hemisphaerica|type=transcript|length=253bp
tcctTGCAGTAAACGTATTAGTTGTATCTTTGTTCCAAATGAAAAAAGTT
TGTACCGAGACTATGAACCAAAGAAAGATTAAATGACTGCTGGACACCCC
TacaaaatcagatcaaaatactTTATAACTTTGAGTATTAATACATGGTC
GTTCCAGTCCCATCTCTCTAGCTCCTTTACCATCTTGGGTAAGAACATAC
GTATAGCATGATATTCATGTGGGTATGGGCCATCAAGTCCACGGTTTTTA
ATG
Run BLAST on NCBI

transcript from alignment at sc0000544:91646..91898

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025737 ID=TCONS_00025737|Name=TCONS_00025737|organism=Clytia hemisphaerica|type=transcript|length=253bp|location=Sequence derived from alignment at sc0000544:91646..91898 (Clytia hemisphaerica)
CATTAAAAACCGTGGACTTGATGGCCCATACCCACATGAATATCATGCTA
TACGTATGTTCTTACCCAAGATGGTAAAGGAGCTAGAGAGATGGGACTGG
AACGACCATGTATTAATACTCAAAGTTATAAagtattttgatctgatttt
gtAGGGGTGTCCAGCAGTCATTTAATCTTTCTTTGGTTCATAGTCTCGGT
ACAAACTTTTTTCATTTGGAACAAAGATACAACTAATACGTTTACTGCAa
gga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014453XLOC_014453Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025737-exon-sc0000544-1491911889:91646..91898TCONS_00025737-exon-sc0000544-1491911889:91646..91898Clytia hemisphaericaexon
TCONS_00025737-exon-sc0000544-1510915933:91646..91898TCONS_00025737-exon-sc0000544-1510915933:91646..91898Clytia hemisphaericaexon
TCONS_00025737-exon-sc0000544-1575043694:91646..91898TCONS_00025737-exon-sc0000544-1575043694:91646..91898Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000544supercontigsc0000544:91646..91898 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.731279	1.42623	0.827992	0.810061	16.7649	17.9236	13.1625	10.5622	4.92988	6.10645	3.70442	4.87028	4.37716	9.59653	7.05916	4.90183	12.6263	9.56548	6.9963	1.62692	3.53521	4.13845	2.51541	2.28687	0	5.60577	1.00273	4.28056	1.62333	1.65391
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00025737 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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