TCONS_00026148 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026148
Unique NameTCONS_00026148
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length100

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026148 ID=TCONS_00026148|Name=TCONS_00026148|organism=Clytia hemisphaerica|type=transcript|length=100bp
CAACAACTTCAAGAAAAAGACAACAAAAATGAAGGCTTTTATTTTCATCA
CTCTTGTGGCTGCTGCCTACTCCCTCGAAGTTGGAACCCAAACTGGTACN
Run BLAST on NCBI

transcript from alignment at sc0000563:59232..59526-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026148 ID=TCONS_00026148|Name=TCONS_00026148|organism=Clytia hemisphaerica|type=transcript|length=295bp|location=Sequence derived from alignment at sc0000563:59232..59526- (Clytia hemisphaerica)
CAACAACTTCAAGAAAAAGACAACAAAAATGAAGGCTTTTATTTTCATCA
CTCTTGTGGCTGGTAAGCATTTTATTATTGGATTCTATATATTTGGTGAC
TATTTTCGATTAGCATTCTATCTAAATTCTATGATTGAATTCTATCGAAA
TTTTATATGAAAAGAGATTAGTTGGGAATATTGAGTTTTACCTTGGCAGT
CGAGTAGCTAAGAGGGGCGAAAATAAATATTCTAACGGAATCATTCTTAT
ATTTCAGCTGCCTACTCCCTCGAAGTTGGAACCCAAACTGGTACN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014699XLOC_014699Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026148-exon-sc0000563-1575043694:59465..59526TCONS_00026148-exon-sc0000563-1575043694:59465..59526Clytia hemisphaericaexon
TCONS_00026148-exon-sc0000563-1575043694:59232..59269TCONS_00026148-exon-sc0000563-1575043694:59232..59269Clytia hemisphaericaexon
TCONS_00026148-exon-sc0000563-1510915933:59465..59526TCONS_00026148-exon-sc0000563-1510915933:59465..59526Clytia hemisphaericaexon
TCONS_00026148-exon-sc0000563-1510915933:59232..59269TCONS_00026148-exon-sc0000563-1510915933:59232..59269Clytia hemisphaericaexon
TCONS_00026148-exon-sc0000563-1491911889:59465..59526TCONS_00026148-exon-sc0000563-1491911889:59465..59526Clytia hemisphaericaexon
TCONS_00026148-exon-sc0000563-1491911889:59232..59269TCONS_00026148-exon-sc0000563-1491911889:59232..59269Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000563supercontigsc0000563:59232..59526 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00026148 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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