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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00026215 ID=TCONS_00026215|Name=TCONS_00026215|organism=Clytia hemisphaerica|type=transcript|length=1481bp
tttcaagtgataaatgtgaaaaattgtgGCTCAAACTCGctgtattgata
ttttttcattaattaaaaaaacaatatgGCAAATAAATACTAGTGATGAA
AATAATGAATCTGGTGTTCttgaaaaattagtaaaaaatagAACATATTC
GAAGTATTTACTTACTAATTTGTGAAATCATGCGGCTAATATCCACACTT
TTTTGAAAAAAGGTCCTTATTTTAAATGGTAGCCACACCCATTCACAAAA
GAATTCCAAAGACCTGAATTGTATGAGACTATAGCTTGAtgatcaaattt
tcactttctgAATTCAAAAGTATCAACTAATAGTTGCCCTGTGATTCTAT
GTGGCTAAAAAGACTTACTAAAATTTCCGGATTGTTAAAAAGGCTATCCA
CATTTTTTCACATCGtgagtgaaaaaaataaccttgttgaaactttcgaa
aatttcaTTGGCTTTCTTTTGATACCTTGCATGcctttctttaaaattga
tatGTGATTAATTGTGGCAATAAATGACAGGGAAAATTTataaattaggc
ttaaaatgaagaaaaactacAAGTTACTAAGTCTGCAAATAACCAcacat
tttaacacaaaatcaTACAGGAAGTATTACAAAAAGTGTTTCTATGGAAT
TAGCCACATATTTAGCACAATATCCCAAAATTTCATAACTACAGCTTTTT
TACATGGTGAATAAAGTCAGTACGTAAAATGCCTGTTGAAACGTTTTTCC
TCAAGTCAAACATCACAATTGCAAGGAGTATTTAGCCACTTGAATTCACA
TTTCTGATGCTGTATccttagaaaatgaaaacaaaaccattcaataagta
tcatctcaagcaaaaaaaattcaaattccactctatacttttttattcaa
tacttTTGTCTCTGGGTGCATTTTAAGTCTATTAACCACATTATTTCACT
TTCAAGTATCAATAGCCCACATTTTTTCACATAATCTCAAAACTTTATTA
TTCAATATAACCTGTGCAAAATTTGGGCGACTGATCTTTTAAATTGAAGT
TGCTACACCTTTTTGAAATTAGTTGGTAGAATTAGCCACTCAAAAAATTA
GCCACAATCTTTCACACACTTTAAAGGCTAATTACTAGCCACTGAAGATC
ACTAGAAATTTCGTTTCAaatgcaaaagaaatttttgtcattttgggacG
TGGGAATTAATCTTTTTAACTGTAGCCACAAAATATCACATTTTATAGGC
TTTTTAAAATCATcactaaaaaagttgaattatgccattcttttttgaac
acgATCTACAGCCGCCCGTAGTGcaaggccacgggtgccaaaaagaaggg
ccgtttgaaatgcggcaacctcattggtggaaatttgataaacagctgcg
aaggagcgctgggaagcaatcagtagaagagaccactttcgtttttgttg
cagatttctataaaaacttctctcagggatt Run BLAST on NCBI transcript from alignment at sc0000564:96745..98225 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00026215 ID=TCONS_00026215|Name=TCONS_00026215|organism=Clytia hemisphaerica|type=transcript|length=1481bp|location=Sequence derived from alignment at sc0000564:96745..98225 (Clytia hemisphaerica)
aatccctgagagaagtttttatagaaatctgcaacaaaaacgaaagtggt
ctcttctactgattgcttcccagcgctccttcgcagctgtttatcaaatt
tccaccaatgaggttgccgcatttcaaacggcccttctttttggcacccg
tggccttgCACTACGGGCGGCTGTAGATcgtgttcaaaaaagaatggcat
aattcaacttttttagtgATGATTTTAAAAAGCCTATAAAATGTGATATT
TTGTGGCTACAGTTAAAAAGATTAATTCCCACgtcccaaaatgacaaaaa
tttcttttgcattTGAAACGAAATTTCTAGTGATCTTCAGTGGCTAGTAA
TTAGCCTTTAAAGTGTGTGAAAGATTGTGGCTAATTTTTTGAGTGGCTAA
TTCTACCAACTAATTTCAAAAAGGTGTAGCAACTTCAATTTAAAAGATCA
GTCGCCCAAATTTTGCACAGGTTATATTGAATAATAAAGTTTTGAGATTA
TGTGAAAAAATGTGGGCTATTGATACTTGAAAGTGAAATAATGTGGTTAA
TAGACTTAAAATGCACCCAGAGACAAaagtattgaataaaaaagtataga
gtggaatttgaattttttttgcttgagatgatacttattgaatggttttg
ttttcattttctaaggATACAGCATCAGAAATGTGAATTCAAGTGGCTAA
ATACTCCTTGCAATTGTGATGTTTGACTTGAGGAAAAACGTTTCAACAGG
CATTTTACGTACTGACTTTATTCACCATGTAAAAAAGCTGTAGTTATGAA
ATTTTGGGATATTGTGCTAAATATGTGGCTAATTCCATAGAAACACTTTT
TGTAATACTTCCTGTAtgattttgtgttaaaatgtgTGGTTATTTGCAGA
CTTAGTAACTTgtagtttttcttcattttaagcctaatttatAAATTTTC
CCTGTCATTTATTGCCACAATTAATCACatatcaattttaaagaaaggCA
TGCAAGGTATCAAAAGAAAGCCAAtgaaattttcgaaagtttcaacaagg
ttatttttttcactcaCGATGTGAAAAAATGTGGATAGCCTTTTTAACAA
TCCGGAAATTTTAGTAAGTCTTTTTAGCCACATAGAATCACAGGGCAACT
ATTAGTTGATACTTTTGAATTcagaaagtgaaaatttgatcaTCAAGCTA
TAGTCTCATACAATTCAGGTCTTTGGAATTCTTTTGTGAATGGGTGTGGC
TACCATTTAAAATAAGGACCTTTTTTCAAAAAAGTGTGGATATTAGCCGC
ATGATTTCACAAATTAGTAAGTAAATACTTCGAATATGTTctatttttta
ctaatttttcaaGAACACCAGATTCATTATTTTCATCACTAGTATTTATT
TGCcatattgtttttttaattaatgaaaaaatatcaatacagCGAGTTTG
AGCcacaatttttcacatttatcacttgaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00026215-exon-sc0000564-1491911889:96745..98225 | TCONS_00026215-exon-sc0000564-1491911889:96745..98225 | Clytia hemisphaerica | exon |
| TCONS_00026215-exon-sc0000564-1510915933:96745..98225 | TCONS_00026215-exon-sc0000564-1510915933:96745..98225 | Clytia hemisphaerica | exon |
| TCONS_00026215-exon-sc0000564-1575043694:96745..98225 | TCONS_00026215-exon-sc0000564-1575043694:96745..98225 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000564 | supercontig | sc0000564:96745..98225 . |
Blast
The following BLAST results are available for this feature:
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