TCONS_00026409 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026409
Unique NameTCONS_00026409
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length912

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026409 ID=TCONS_00026409|Name=TCONS_00026409|organism=Clytia hemisphaerica|type=transcript|length=912bp
CTTTATTCTCTTGACGAGGGTTTAGAAGGTGATCAAATAATCGAAGACGC
TTTAAAAGCACCATCAAATTTTGTACTAAAGCCTCAGCGAGAGGGAGGAG
GTAACAATCTGTACGATCAAGAAATGGTAGATGAACTACGGCGTATCTCT
AACGATCCTGAAGAGAGAAGTCAATATATTCTCATGGAACGTATTCGGCC
ACCTGTTGTACATAGTTATATCGTGCGCCCTGAATCTCTCAACCCCATGG
AAAGTGAAATCGTATCAGAGTTGGGAATTCTAGGAGTTATAATGAGTGAT
GGTGATGATATTATACAAAACGAAAGTTGCGGCCATTTattgaaatcgaa
agattgGCAACGTGGTGAGGGTGGACTCATCGCTGGTAGAGCTGGCATCG
ATTCGCCTTGTCTCATTTAACCAATAATGATGACGTCTGTATAAGGTTAA
AATGGTCGATTTCTACAATACGAAATCTCTTACGCCCCCCTCCCCACCTG
ATAGACCATTGACTTCCAAACCCGAAGGAGCTATCAAGACTGACTATCGT
ATGGGATGTGATACAAACAATACACACAAAGTCCTGGCTATATTTTATTA
ATACAACTCCAAAATTGTAACcttaaatataaatattttaaaattctgca
ttaaaatatttttttaattaattttcttaaaaatttcattcatatttttg
tatttaaaaattttagtttggataatattatttttgttgAATATCTTTTT
GACACTATTTATATCGATTGTCTATCAATATAATAGCCTCCAGGGGGAAA
CCACCCCCCTTTTGAAGGTAGCCTAACCTTGTGATGTTTTTATCGCTATT
TAATTTGCAGTAATGTTGAGAGTAAAGTGTGGGTACAAAGAGTATGCTTT
GTTATTCTGGGC
Run BLAST on NCBI

transcript from alignment at sc0000571:29099..53780+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026409 ID=TCONS_00026409|Name=TCONS_00026409|organism=Clytia hemisphaerica|type=transcript|length=24682bp|location=Sequence derived from alignment at sc0000571:29099..53780+ (Clytia hemisphaerica)
CTTTATTCTCTTGACGAGGTATGGTATAGTCTGTGTGTTTCCTTTTCATA
TCAGACAAATATTCCATATCAGAACATTGTCTACCTATTGTTTTATTAtg
atgatataagcaaaaaatgtttttcttctttccgaccaatcttgctccac
atccgtgtcaatccaatgtgaaaaagcttttgaattaaGATTAATGAGTA
AGCTAAGGATATCActgttaaaaacaaaacctttaaggtcGATGTTTTCT
ACTTTGTCTGAATGAGAAAGCTAGACTACATCCACCTCCAAAAAACTATt
gcagtagagtctccataacttgaaccAGCACGGGGAAGGGAGATTCGTTT
GAATTAATGGAAGTTTTGAGTTACGGACCCGGGAGGGGGCAcacaaggta
aatgacctaccataccCTTACCCTTAAGGATATATTACCCAAGCTTctca
aagtgcactgtaagggtcaaaattagcaaagatgagaaaaagtgcacttt
aagagtgtaaaatttcgaaaatctaaccatATCTTGCCTGAAACTTTTga
gaaaatgcaccgtaaggctggatttttcactcaaatttgctcaaattttg
caaagtttttttctctgcactgtaagggtccgatttcaaaggcctaattt
tgggccatAGGTATGGtagtttttgaatcgagtgcccccccccctgaagg
gacgagaaaacttgttcgagttaaggagacattcgaattatagaggttcg
agttaaagaggcaCCACTGTACTTTTGTAATAATGtggtaacaatttttt
tttcacctcTAAGGTGTAGGtggttttttaaaattcaatttgaGAGTAAA
AAAATATGGGTCAAATTTCTCACACAGAGTGAGTGGGATAAGCCATTTGT
TAAAATTAAGTGTTTTCGAAAGATTAAAATTTGATTGCTAATCTTTCTTG
CTATAATTGAACTTCAAGGAGTGATATTATCAATACTCTCGAAACTGAAA
TAGAAAAGCATTACGAAAATAAAAGTATTTAGACATTGCAAAATTCAGCC
TTAAACAGACTTTTGAGTCATTTTCCCAATGTCACAAATTCCCTGATTTG
CATAAACAGTCTTTGTGCGGGTACTGAAATGTCAGAGCCGGTTACAGTTT
GCTCATCTGCCATGATATATCTAAATAAGTTTGAGTTTATTGACCCAGTG
ATATTCTTATTAGAagtttatacacccctgtctcgcagccccggtgaAAA
TTTTCCCCACATCGGGGATAAAATGTTCTTTCGAAATCCCAAGGGGATAG
AGGTTTTATTGTTCCagtagggatggttttggagtacaagTTTTATACTT
TGAATTTCGAAttgggataaaatcaaagtcgatttcccactagggctgaa
attgtagggtaatTTTCCcgccggggacaaaattttgaccaaatgttcca
gtggggctggggtcccagcgggtctgtgacacaggcgTGTGATTATGGTG
GTATGGATCACGAAATTTACATTTGGCTGACATGACATACTTTAAAGCTC
GGCCTTACGTTACTTTGTTGTTGATAGACATTTTATGGAATGAcctcttc
cagaaaaagaatcCACCCCTGATGATAGAAACTATTTACTTCACTGTAGC
GtggtggtcgtgttacaaaattACAAGCTgtttgtagggaaaaaatagtG
TCTAGttaaaactttctccagaccttctctatagatgcttatgcctcagg
aaaaaaaatcccctaaaatcccactggtggaacatcccttttttcgggta
atttcttttttttcaggcaaaaccctaagggcgaaactttttgaaaattt
caaactcattttcagacaatatcatgtttaccattcgaaagctctcaaaa
aactatatagaagacttttaaacgggtatagccgatttcattacctaact
cgagataattcacgcagaagaggcaatttatggtcaattttagaccaaaa
tgtggtgaaaagtggaacttgccttttcaaaatttcctgtGAAAATCTTT
CCCATTAAAATAGGGCAACCTTGATTTTGAAcaatgattttgttttattt
taatttatagGGTTCTGAAGGCGACGAAGCAGCAAAAATGGCTTTGAGTG
ATCCTACAAAATATATCTTGAAACCTCAACGTGAGGGTGGAGGTactttg
tctttttgaaaaagaatataCTGATTGTACTGAACTTTTAAGAACAAATA
AACCTAAGTAATATTGATTTTTAGATCTTCCTTaatatgtatgtatgtat
aaatttacaaattacTAATTCCTAGTAATATTTGTACATGCGATTCCCTA
GTACAACAAGTACACTGAGTACGAGTTGTTCCAAAGAGNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNcatttcattgaacacaaacttccgttacct
taaaaagacatataatcgaggcttacagacacaaaatgTTGACTAATGta
aaaagtttagaagtataatttttttttattgtatacggcattttaagcca
aaacggtGTCAGGAATTAACGCACATTAtcgtattttaaaggcttttgat
gtgcaagtaaaaccgttaaccggcgtttgcgacgacgggaaccgtctagt
ttcATCTAAATAAATTAATATAACCTTAAATAATATAACATTTTGGTAAA
CAATCTATGCATCTTAAGAACACCGTAAGGATATGTAAACTTCAAAGTAA
TAGTAAAGCTTCTAACTCGAGAGTAGTCAGCAGATTTTGAGTGTTGGGTC
GTTGTATTTTGACTATATATTAGTTGAGTCCAGTCTAAAACCCCCAATCT
TGATAAACTGGTAGGGCATACACAAAAACTGTTTCAGACAAATTAAAAGG
GAGGAAATTAGAAGAGACAAGAGCCAGCCACAACAGTTGTGACTAAATGT
CTCCCAATATTATTTCGTTCATTTCAGTAAAATTTATGGGTTGGATATCT
ATATATTTAGGTTCTAAGTTGGAGCTCCTGAGGGtacatttttaaagcat
ttaattTCTCTAGTAGGGTTTGGACTATTGTAATATTAGGTTAAGGtact
tcaaaatttcattatctgCTGTGGTCTCGTAGTTTGGGTACCACTTTCCT
GGTGATATCTCTGAACAGCGATTTTGATTGGCCAGGGTTCATAAAACTTA
GTTCAGTCAACTCTTTCTATTTCGAACCTCTATGATTCGAATtgttctgt
aattcgaactaaaaaatTGATCCCCTCGGTTGTAAAGTAATGTTAAATTC
TCTTTGTAACTCGAATCTTTCACTAACTCGAAGAGTATTTCTTAGTCCCT
cgaatatcgaattagagagagtcgacttTACTCATACCTCTTTTTTTCTG
TAGGTAACAACCTTTATGACGAAGAAATGATCAACGAATTAAAACGTGTT
TCTGACAAGCCTGAAGAAAGAAGTCAATATATCTTGATGGAACGTATTCG
TCCACCAGTTGTTCATAATTATCTTATCCATCATGATATGAATAAAGAAA
CGCCTCCTGTTCTTGATGAAACTATTGCTGAATTAGGTATTTTCGGTGTC
CATATCAGGTACGTGGTGTttgtcaactctctctaattcgaactttcatt
attcgaatttttatgtaattcgaatgtttctgtaattcgaatgaAAAGAT
TAGTCCCGTCAGACGGAAAGTGGTATAAACCAATCTCTGGTCAAATTATT
ACCGACTTTATGTATTGGAGggtatcgagggcgacggtaagtgaaatcga
tacaaaacaaagtcgatagttgatgtatgGCTCAATATCgtctttgctca
cctaaacagacgacggaattttggtgtttttaccatcgtcgagcaaagta
gacggtgattttggagacatgtcaactttgctttatgtCGTCCCCCTCGA
TTTCTCTCGAAtaaataaactcgctattgaaGTGGGGAGGGAGGCATTCC
TTTTTTGTCTGAAAACCGCGCTGGCCGAGTGTCTTTAACGGGAAGTGTGG
CTTTGCCCTATTCATTACGATTACGCACATGTTTTCAATGATTTACAAGG
ACATTTGCaaggagaaacacaaatttctcTAACCAAAACAGGAAAACACC
GCAGCAAGACTTTTCGAAAAAAACGTGGACGTTCGGGTTTGGGTGGTACC
AACTCTATATAATATAAACCATTAAACTTATTTAATcaaggaatcttcaa
cctttttcAAATAAGAGAAAGTTACGACCCTAAATTTTGCTCCGTATTTA
GAATGATGGATCGAATTAgacgttttctttgtttttacacGGCAGTTTTT
TCGAATAAGCAGGAGTAGGAAAAtcttctaaattctaataagcggggggg
acAGAAGACAGAATCTTTttaaactgatatcaatttcaacaacaaaaaag
aaactttagcaaatgaacacgtaaaataagaaccaatactaacaaaaagg
aatattttaacaagtttaaggtctatctacactgtaatagcatattgaat
tattcgaattcgaattttttttctgcccTCAAAAGGCTAGATTTTGGGGA
GAAGTCTCGATATAGTTCCCTAattgctaatttttttttggatggaAACA
TTTGGCACTCAACCGTCATCTGACAAACCTATTACCTCTTTGGTTCTTTA
ATAAGCCTAAAAAATAAGATAACCTTTNaggggggggggggggggtctta
ataagagcaggggtggattttttttctcttaacaattagcggggggcgtc
tattcgggagGCAAGAGTAAACGGCTAAAACCTTATTTAGGTCGCAATCG
catcttttgttattttcaattgtcttaAAAAGTGCATCGCTCATTTGCTT
TCAAGACAACACGGATCTCAGTTAACTGTACAGTAACctgaaaatataga
aaatattGCTCTAGACATACATCTTTCTATCTTTCTTTTACAGTGTTGAG
AATGAAGAGGTAGTAAATGAAAGTGCTGGACATTTGCTTCGAACGAAGAG
TATACATCATAATGATGGTGGTGTTGTTTCAGGGCTAGCTGTACTTGATA
CTCCTTATCTTTATGATGGAGAAAGTGAGCAAAAATGATCGGAAACTAGT
CtaataatcttttaaaagtaaaaatgaaaatattaacaaTTGAATGACAC
GTTTTGAATGAAAGAaggatttttttgaatttaaacacaATATGCAAAAC
TTTCTTTGTTGGATCGATGGTGGAAATTGGACTATTTCAACTCAACAGAC
TTCTTCTAAAGGACTACTTCTTTTTTAATGGCATTATATCATACAGGGAA
CATTAGAATTTGTAGTTATTTTTTTATCTCAAAGTCACTTTTTAAACTTG
AACTTTTTATAACACTAGATagatatacacccctgtctcacagccccggt
gattCTTTTTCCTTCAGCGGgaataaaaattgaaacctcaatggggataa
aaattctattgttccaaggttaaaaagtccagtggggatggttttggagt
gcaatttctaaacaatgaatttcaaatgggggtGAAATTCTAGCGTATTA
TCCCCGACCGGGGACAAAGtctttgctaaattttccagtgaggcttgggc
cccagtgggtctgtgacacaggggtataaATATGTAAGAATATTAAAATT
AGAATTATTTATTAATAGACCTGTTTCTTTATCATTAAATGCACTCACTC
CCAAATATCAGTACAATCAACTCTTTATAATTTTAACCTAAAATCAAATA
TGTGATCTATACCGAAACGAAAGTAAATCCCTCTTTTTAGGGCTGCAAAA
CAAATATCTTCAGCGATTctacaccccccccccctgattttttaaaaact
ctTCTTCCTCATGGTAAAGCACTTTATCGCTTGCtatttgataaaaaggg
cgGTCAACTATTAATGCGGAGAAATCGCATATTTGATTGTTCAATTTGAA
AGTAAGCGCGGTGGGTCGACAAAAAATTTAGGCTAAATGGACGCAAATTT
TCACAACTGGCGGTGTTTTAGGGCCTTTATTAATACCTTTGAATCAAGTC
GATCGAACAGGGTACaaaagctttacaaatctaATGTAAAAGAAAACTGG
AGCCTAAATTAGTAATCAGAAAAACTTTTCGGCGCCCCCTACCCTAAAAG
ATAATCAAATTGAGCCCCACCCACCTCTCCTAGCGCCACGCTACTGTTCG
TGAGTTTTTTACCATCTTTGAAATGAAAGATGTGTGAACGTTTGACgtca
ataggccatttcacagtcgcaaagcgtaatgggtaatcaggacaaCTGGG
CGCTAATGAtgcgacttactattggtccaaagttttgaagatttttgcgt
ctaaccaacgggAAACCGTTATCGGGGCGCAATCAGAATCCCCATCTATA
AGCTTTCTGGTCTAAAAATTCTACcagtttaattttttataaggtTTGCC
TTCTtggcaaactatataagaacatgttgagaacattttaaggctttacg
gactttcaaacacccgatttcttagcaaaatttgccctaaaatggtgaaa
ataagaacatgttaagaaaacattattaggcttaaaatctcaaaagtaaa
aaacatcaggcttcaaaaattttggatgttcttataagaggGTGTACCGT
ATTAAAGTGGAAACCAACGCCGTATGTGGTATTAGGGTTTATAGTACATC
TAATGAAAACTTAGTGGGGGGTAAAGTACtttgtttcttatttttatgtt
tttttactGATCTATATCTATGCATGTGTATGTTCTAGAAAAAGCACTTT
GTTATTTCCAAAgccttttttttaatcaaatgatACTCAGAGCTTTTTTC
TCTTGATTGACTTGAAAAGGCAAGAAGCTCCTCATTTCTAGAACTTTCTT
AGTGTCGAAAAAAACTGACGACTCAGCGCTTTTGCTCCTTCcacaatatt
tgagaaaaaaggaagattcccacgaaattttacaaccacaaacgatttgg
aagcgctctttagaatttagaaattaggttggaagggtagagttttaacg
ctagatttAAGTCTTACGAGCTTAGGATCAAGTCTGAGAATTGTCcgcca
atagggctcagaatatagcctggaagtctataaacccctcccgaatagca
taccgtcgcgaatctaaaaatagacattgatttttatgtttgactgaaat
tcaatctcatcaccctttgcgtttattacgcttgcacgcaaattacactc
aattacaaagaaaaagtaataactttcacgacttttgaattaagacgaaa
aggattgtgggattgaatttcgtcaaatgagagaagtaataatcatgacg
tttacacgacgaagcgctattgaaatatttcaaaaaaattatcaattagc
ccaaaaactactttctcgcccgaactttaaattgctaaaaacgaggaatt
aaccaaaattctcaagatattttgaccgagattgtagATTGTAGATTGTA
GATTGTGAGGCAAGAGGTACCTCATTTCTAGAACTTTCTTAGTGtcattg
gaaaaaattgatgacTCAGCGCNaatatattttgaccgagattgtagACG
TGAGGCAAGAGGTACCTCATTTCTAGAACTTTCTTAGTGtcattggaaaa
aattgacgacTCAGCATTTGtttaacttgaaaaatcaagaagCGCCATTT
CTAGAACTTTCTTCCTGTCATTGAATTTCTTTAGTTCCTGCTCAATCAAA
AGAAATTAGAGTAATCTCGAATTATTCTCTTTTTTAGATTGTGGTTTTTT
GAACAAGACAAAGCATTGTGTAACAAGTCTGTTCTGATATGGAATGCTAT
AAAATAGACACATTTTTGACATTATTGCCAAAGGTAGGGATAGCTGGATA
AAATGTCAACGGAGCTTGAAAGGCTTACTATATGTATAATCTTTAAGCAA
AGAACTTAATCTTTAGGTAatgttttcatcaattttaaccTGGCCGATTG
GTTTTTAGCAAAATACCAAATTTACGTAGGTGAATTTTTAGTAGAATATA
GATTGCCCTTGGTTtgccaaataaaaataaaataagatttataatacact
cttctcgagatgcataaatttattgttgtcctcgttttcaaacagattgc
attgctataaaattacatattcacaatgatgattgtgttgtttacaccta
atgagacattttgaatttcaagtacttttgtttatGTTAAGTGTTTATGt
tgagttaatgtttgccttttgggaatttaaattggtttttaaatgtataa
tttcatagcaatgaaatctgtttgaaaacgaggacaacaataaatttata
tgcatctcgagaagagtgtattcaaGGCCTTTAGGTCAGTAAGGAATTTG
ATTTTCTCCGAGCCTGAGGCAATATGACTTCTCTCTAAGACTGTGCAAAT
CATAAACTCAGCAACGATTCTTTTTTGTTATAATACGCAGTAACTTCTCT
TTATAAATGTCTAATGCCATGACGTGTTGTTTATCGTGGTAGAtccttat
tttttataagaacggtTATATTCTTTAGGTCTTAAACCTATAATGTTTTT
ACTTTCATTAATTACAGACAATTTCAACTGGATTTCTTACCCGAGAGAGN
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TTCCATAATATTTTCTTATCAAACAACTCTTTGACAATAGGCTAATTTTT
ATCGTTTTCTATAGGGCATGACAAGATGCATACAAGTActtgaaatttga
taaatttgacaaaatgttttgttgataaAAATGAGGCATTTCGTTTACTC
TTGCAATGTCTTTATTCGTTTTGATGTACACTGTAGAGTCATGGAGAACG
TTTTCTTGGTtcaatgaaagtttgaaaattatatcTTGGTATATACCATC
GTTttgtatacacgcttttttttataagaatggtgttttttcatttcatc
atggatattcctAACTTTTTGGctaaaatcatccaaaaatattcttacgg
tattagtaggttaagatcgaaattggcaatctacaggttaaaatgcatta
aaaatggcattcttagattCAGTTGCTAAAATTCCATTCTTAccatattt
ttttggccattttcatcatggacattcttataaagtttattattataaaa
aaaaggcgtgtataaggttcccatttccgcactaaacTTGTTATCACTTT
TCCGCggaatctttccgctatttttcctgggataaccggcatgagattgg
aaatatacgaaactgcctaactttctgaaacttttttttaactaCCTGAA
GTCCTGGTCTTTATACGTTAGAAAAATGGCAAAAGAATCTTAGGTGCGGA
AATGGGagtcttatacaaaacgacggtatgtTTTGATTTAGGTTTGGCCG
gggtttttgtgatttttaagtgACTTAAACgttctttaaatgttcttaat
atgcaAACTAAATTCACTCATTGACTAATGAGGGTCTGAAATTTAGTATT
TTATTAAGTCTGAGGTTCGGAggattattcttaatttgttctaaagtttt
ggaaaaaattgaaacttgtatttttataaacaatGTACATTTGTAAATCG
TATTTtggtaaaaaagtaaaatttctcaATAATGGTAAGACTGAAAGAAC
CTAcactattttataagaaaatccaaaaattttaaagcctttagatgttc
ttaactttttgagattcaaacctaaaaatgttcttaacatattcttattt
ttgaccattttgtgagtatatttttgtccattttcctaataaAATAGTTG
TTTTTTTGGTTCCACAAAGTTCTTAGTTCCTAACTTTACTTAATATTTTA
CCATCGAAgcccttatgttcttataaaaaacgtgtactcaacAACCTTAA
GAAAGTGCCTTCGATGAAAAAGCTTCCGAAAATTCAATTCAAACTCAGGA
TTTGCTTTGATTCTTCTTTGTCTTGAGTTTGCTATTTacacgttttgttt
ttttataagaacatccaaaatttttaaagcctttggatgttcttaacttt
ttcagatttaagcctaaaaactttcttaacatgtttttattttcgccata
ttgtgggtatttttgtgcgtttttctaagaaatcgggtgttttaaagttc
ctaaaagccttaaaattttcttaacttgttcttaacattttggccatcaa
agccttatgttcttatatagtttgttcttattaaaaaaacgtgtattgtt
tGAAACcatgtttttaatgttttttagaATAAGAATAATAAGCGATCGTG
AGCGGAAAACTAAAATCGCCAAAATGATtgaagaaaataacaacaatacG
GAAACCCCAAAGACGGAAGGCTACAAATCATTAAAATTCAGTGAACAAGA
AATTGAAGACCTTGTCAAAGCTGGTAAAGATTGGCAACATTGCAATGGTT
GTTTAATGAGAAATCTTGAAAACGAATTTGCTGTCAATCATACAGCTTTT
GTTTTATTCCCAACAGCGTTTCCAAGGCAACTGTATGATGAAGCAACTCT
ggttcaaaaagattttcagttaTTGTATTTTAAAGCAAGCAAAGATTATG
AATTCATCAAATCGTCTCTGCAACGGTATGTGTTTGAGGGTGGAGTAGAA
CATTATTCTGATTAATATCTTGACATTTTAAAAACtctcaactctctcta
atttgaacCTTTGTAATTTGAGTCTTtaataaaaccttaaaaactCTACA
ATTGacattctctaattcgatctttaagggGTCAAGGATTTTTTTTGAGT
TCGAATTATGGGAGTATTTTGACTCTTTAGCTGAGGGGATAAATTTTCCA
GCTCGAACTACAGAAGACtttgaataatagaggttcgaattagagagagt
tttACTATAGATTCGCGATGCATtattactcgttttcttttttagCGTAA
TTATTAAAGATGAATTTACacgaaaattatttgaaatttacGAAGAAACA
AGAAGTGAtttaaaacaggtaaaaaaaatttcgattttataCCATAGAAT
GtgtactttaatcggattaattttcgcgagaattTATGATTAATTTTGCT
AGCCGAAGAAATCACGAAATTGTCAGGTAATATTTTTGTGAATCAGttaa
aaatcagttaaaaaTGGGCCTGGAAAAAGCCAATTTCTGACAATTTGAGG
CTTAAAGTACTGAAAAATAAGAACGGGCGAATCTCAACAAAAGTTTATTG
GTTTtgacaaaaaagtgtttttatgtttgttattgttgttttagAAAATA
AGAGTGAACTTGAATCGATCAGATTACATGATCAACCAATGCAAATGTgc
atccaacattgaaaccaaTGACCAACGAGGAGGCTATCAACTACGTCAAA
TCGAAATGAATATGATTTCAGTTGGAGCATTAGCACTCAGTCCTTTGGTT
GGTCAAACGCATCAGTAAGTTGTTTTAAAAGCATTTGATGATTCATTGAG
GGGTTAGAAAATGTCCTTATTTATCATTCTGAATTAtacttttaaaggtt
ttatttttcaataaaagtgatatcgtttgcttactcatcaatttcaattc
acaagctttttcacattggattaacacggatgtgaagcaagattggtcag
aaaaaagaaaagaaaaacatctttttgcttatatcagcataatttaacaa
aaggtagacactgtcctgatatgaaatatgtgtctgatatgaaacgggtc
ACTTACGTAAAAAAAACTAGGCTTTGATCTAAATTCAACCTGTATTTAAC
ATTCATGTAAAACATACCTCAAgcaaaaaatatgacgttttTGTTAAAGA
TTTAACCATTACTggtaaaaaagataaaatgctCTAAAGAGGTTGACAAA
TTCAATGATGATGACTTTGTTAGGCATATTCTTAATGTTTTTGCTAATTA
CATTATGAATAtagagtatattcttataaaaaccgcGTGTATTTACGAAA
AGAACATGCCCAGAACATTCCAGCAAGTAGATCTGgtattttttaatcat
atttGGTTTCTAAAATTGTAACTTGCTGATGTCGGAAACATACGTTCAAA
TCATACACGGAAGATTTTCTTTCTGATAAATAAAATCTTTCCATATGAAA
CTTTATAAATACCACcttcaaaacattttgattCTGCCAATATTACGGCG
AGTTCACAACAGAAGCAGACCTGAAAGTCCGTCAATTCTGATTTCGACGA
TACAAAAAGCGTAGGAATACGTTTGTTTTATTTGGAGAAGTTAANAAGCA
GACCTGAAAGTCCGTCAATTCTGATTTCGACGATACAAAAAGCATAGGAA
TACGTTTGTTTCCTTTGGAGAAGTTAAAAGACATGAAAAGTCCGTCTATT
TCGATCTTGACGACACAAAAATGCGACGATTTTAAGGTCTGCTCATATTG
CGAGCTAGCCAATATTACTTATTTTGTTGACACACGGCTTGAAACTTTTA
TGTTCGAATCTGTATTAGGTATCTTGCTGAAGTCATGGGAGAAGATTCAC
CTTACCAAGCAAACCAGGTTTAAATATATTATTATTAGCCGGCTAACATT
CTAAATACTTATGGAAAAGATTTTACAGCCTCTTCCCCAGCTGCCACACA
ACGTTGtgtcaacgttcatctaacgttatatggacattTTAAACATtaca
tgaacgttgaaacaacgttatgtgccagcttgGTCCCCTCTACATCTATC
AACCTTTAAAGATGCTATTAGGAGACTAGGCTCGAGCTTAGCCATGTAAG
ATTGATGTCAACATTCATTGCATTTGGCATTCTCAAAGAGAATTTAGACA
TCAATTTATCACTGTTCCCTTCAAAACCCGCCGCGCTGAATCCCTAAGGC
TTGATAGGTGAATTGGGGGAGTGTGTCCAATGTATTTAtggtctacacgt
tttttataagaacattcaaaagccttcggatgttcttaacattctgattt
ttaagcttaaaaatgttcttaaaatgttcttaattcaCCATCTTTTGCGC
ATTTTTATccatttcattaaaaaatggctGTTTTCGAATTTGCAGAGCCA
taaaacgttcttaacttgttcttaatattttggcaatcgaagcctatatg
ttcttgtatagtttattctttaaaaaaacgtgtacttttgTTCGGTAATT
TTGTTGATTGTGACCCTCGTGCCCATTACCACGATTTTTAATGAAACCAT
ACTGATTCGCTTTGCTTTTAATATTTTCAGATACCCATTCACCAAACTCA
TGAAGTATTGGGCGAATCATTAGCTAAAGCTTTCTATAAATATGGTAACC
ACAGGTTAGTTTTACATGCTTAAAATAATCAATATCCTCGAGGAATGGTG
GGCACTGTTTCTCTTCGcgaattttagcttttttcgcGAATATTAGTTCC
cacgaaaattttgaaacccGAATATAAGCAAAATTCCCttcgaaaattaa
ataaattggGTAAAAAAGGGGCCTACAAAATTTGGCCCACAGGGTAACTT
CAGGTCACACGAAAAATTATCATCGCTGCGCAGCTGTAGCAAGGTTTTAT
TGATGTAATATATTAACGTTTGTAAAGAAACACcattgtgtcacagaccc
gctggggccccagccccactggaaaattttgtttccagtgggaaaaatac
cctataatttttaaaaattgtactccaaaaccatccctactagatttttt
aaccttgaaacaatagaatttctatcctcattgagatttcaatcgaaatt
tttatccctgcgctgtaggaaaaagtttcaccagggctgtgagagacagg
ggtgtaaagaaTAACTGGTGTGTACTTGTTTAAGGACTCTGGTCATGGTC
ATGGTCAAATTTCAgaaccttatgttttcgcttctttgacatgtttaaga
acaaactgcttttgaaaaaatgaatttaagtaattacatcatgagtaatt
aaggaaaaagtgtggcatggaccttaataaaacgtcatagCGACGCTATT
CGTATACTTTTCACAAgaaaagcctaatctccttggggaaatcattttat
tgtttcaaactttatttaagttaatgacaaaaaatttctttatttagagt
TTTTCGGAAAgattttctatttggctacatcccaagttatagctgttttc
gtatggaaatttagtggagaaaattgccgaaaatgagattttttggagat
tttaaaggaaagacacttccacaaaaattttccgaaattatatttttaga
tactaaatagatacatcacgaaccaaaaaaaaaatccaaaatgtttgatt
tttaccgagattagggcattgaaaggtgaaatactcttcttcgaaaaact
cttcgttttcttcttcattttcttcttcatttaattgtttcatttcaatt
tttcgatttttaaattctaaaaaggtaggtttaagaggacatataaaaaa
agttatacattaatcctttttaaaatgcagaaattgccatttaagttggt
gtaaaatcgaaaaattgggtatgtccagagcccttaaacatTGCTCTTGA
GAGAAAAAAGACACAATTAAAAGTAATAACTCGTTGGAAGGATAATTTTG
TGCGTCGtgataaaaaagtttgaaaatttgaaaatgaaagagaagaaaat
aaagaatttttctACTCGACCAAAACTCCTGAAACTTTGAACCCCGCAGA
TTTCAAGTGTTTAcattttcaatatcattttttatggtcaaaagTTATAG
CTCCTTACAATAGGTCCATTTCGAGCTTTTTTGTTGCCCAATTTGACCTC
TCTAGCATAgtagaaaaagtcaattttggaTTGATTGGGCTGCCCAATTT
TTTTCNACCTCTCTAGCATAGTAGATAAAGTCAATTTTGGATTGATTGGA
CTGCCCAATTTTTTATGGAACAGACTTTAAATAAAAGATATTATTTTCGT
ATTCCTCTAGGGCAATAGTACTGTTTATAATCGAACACACAGATATCAAT
ACTACAGACCAACGTCATCTAGAACATGCTTTTCACAGAAGGTAAGATTC
TCAAACTTTTAAACGGACATTAAAGGTTAGAGGCCCACTGTGAGCCTAGC
TTGTAAATCTGTATAATGTAATAGGGTCTAAAACTGTAAACGTCATGTAA
AAATAGGTAagaaatgtttgaaattatAGCTATTTTGTTTTGGTTCTCTG
TATTGACCTTTAACATCGCGCTGCACAgtgtttttaataaatttaaGGGT
TTAGTCCTTGAAAtaatttacatattttgagtCGATTGACAACTATGTGT
CTTTCAatattatgtttttatttttctgcttttggaagttttcgaaattt
tctttgtttgttgAAAATGAGGAAAGAGGCAGcgttataaaattgttttt
tctaacCTTGGATTGCATCATCGAAAGGAAAACGGAGGCACACTGATGGA
TCAGTCTATTGTGATCGTTAAAAATAGTGGGAACGCCTACTTTAAACCTT
AACTGAAGGTTTTGTTCATAAGTCTTTTGCACTTTTTTTCAGCATTCGAA
AATCCGGAATCAAACATCGTGTCCCCTGTCTATTTCGAAATTTGCAAGAA
ATATATGAAAAGTCCACTTTGACTGATGATTCGAAGTTACTTTTGTAAGC
ACTTTTTTAATATAGATGCTCCTGTATCACAGACTCGGTGCGACCcccaa
ccattgagtttcaagcccgaagggctagaggcgaaactttaacccttctc
ggGCAAAAGAATTGTAGCCACTTacttcccatccaaaacgcctatagaac
gcgccgtaatcatgacgacggattgtatctagcgatCCCTTTTTGGAGGA
CTATATACaccttttttaaatctagcgatagttttagtttcaatccggtt
TGTGTAAAACCTACgtgcgggcgttctggatgggaaataagtggtttcgt
TTCCCAtgatccaggagtctcgcctctagcccttcgggcttgaaagtTAC
TGAACccaaccccactggaaaattatgGCAAAAATTTTGCCCTTGACGGG
AAAtaaccctacaatttcagcccactGGTGAATTGACTTTTTTATTCACT
cccaaattcaaattcaatgaaaaaaatcgCACTCCGAAATCATTCCCAAT
GGATTTTTTGACCtgagaaaaatataatttctctCCATTGGAAtatcgat
agaaattttcagccTACTTTATGGGAAGAAGCTCCAAGGGAGAGATGAGA
TAggggtgttctaataaaagCCCTCGCCAAATATATCGTCTCTGATTGGG
TAAAAGCTTCACACGCCACGCATAGGCGTAGCGatataccctgcaaaatt
tatggatgagagcggtttttacgagactgtaattattgtctttgtgtTTA
TCAAAAGAtcatgaatatgtcataaacgtctgcactccctcataaatttt
gcagggtatctcgctacgcctatggcACAGTTACTTTTTACTAATTcgaa
aattcttcattttcagtGAAGGCGAAGAAGTCGCTTTATGTTACCTTCGA
TCAGGATACAGTCCAAATCATTACTCAACACAAGAGGTATTGTTCAAAAT
AGACTACCTATTGATCTTTTCACTATCTGACAGACAAAAAACTCATCACA
CGAAGTTTTTTTTCcagaacatttaaaaaaaatgaagctttctgatttct
taactttcttaaatttacgaaaaaattgtttaaaaacttTCAGTTTAAGC
GTCGACTATTAAATAGGAACTCGTCTTTTTTCGTCTCTGTTGGGAAAAAT
AACCTACAATTTTATCttcactgggaaattgactttgatttcatcccatt
tgaaattcaatggaagaTATTTGGATTTTTTGAGCTGGTAACAATAGAGT
TTCTCTTCCCATTGGAATTCCAATGGAAATTTCATCATCACAGTGGGAAA
aagtcccggggggggcactcatatggttcGACCCACGGCATGTACCGCCC
TTAaaggtaggtttttcgagaccctaaatgcactgtaagggtgtactttt
tataaagtgcactacaagggtcttcttttagttgaatacactgtaagggt
gtgtttggaGATTGCTGAATTGCAAGACTGACAGTAAAAATCGGATGTAT
CTTTACAGTTTTAATTCGgatccattttgatttgttcttaacattgtGTC
GATATCTCAAGGgcatctcaggctcattttcaggtggcttcggcaaaaaa
aaatataaaaccaaACAACACTGTAAGGGTTagaaacgttcggtaaaatg
cactgtaagggtaccttttcactgctcaatggctgtaagggtgcgatttt
gaaagccattttttggcggcacatgtcgtcgtttagaaatcgagtgcccc
cctccGCCCcagggaaaaagttccaccggatTTACGAGACAAGGGATATA
ttaaaatgtctttgtttttctaGCGATGGGATGCACGTCTGAGGATTGAG
AAATCGAACGCAATAAAAGTACCAATCATGAGTGACCAGCTTGTAGGTAC
AAAAAAAGTTCAACAGGTATTAGCGGAACCTGGAATGGTTGAAAGATTTA
TACACGATAAAAATGCTGTACAAAGAATCAGAAAAACTTTCGCTGGACTT
TATTCTCTTGACGAGGTATGGTATAGTCGTAACTAccacttttctagcgg
aaaaaaAGACCTCTGATGGGAAGTCCAAAAATTAGTTATCTAAGTCAACG
TAACATTATCCGGGGGTATTTTTTCTCTTATTCTATAATCTCTATCCCAA
AACGCGTCTGGTACAGGCAAATTTTATGCAGGCTATCCCGAAACAAATTG
CagcaattttttgacaaaagtcactcagcgtcatcaaaaattcaTCGGAA
AgctcagtcagaagtagactctagtctagagTTCTAGAAAAGTGATGTAT
CCACCGGAGGACGGCCATTCTCTCTTAcagatttccaatgaaaatgGGGA
AGATGTTTATAAAGTTATTCTGCATACTTTaacggccctttttacgccgg
cccttattacgccacagcctgatTTGGGCTTAcaccaattagggccgtaa
ataacgccaaaatttgttcaatttacattaaaatatcatttttcagtagt
aaactgttgaaaattccattgaaaattactcatttttgcgaagttttaga
tgtggagtaaaacaatgggtAACTTTTTATCTTCGAATCATATACCCAAA
ATTCTTTagagaaaaatggtcaaaaattaacgccacttttaagtaaaatc
tgcaaaattttggccctttttgcaccggcccttttaacgccggcccttat
tacgccaagagcctaaaaataacgccaataagggctgGCGTATAAAGGGT
CGATTGATACCAATGACCTTTAAGGGAATTTCTCATAGATTGAAcatcta
aaaaaataataatgatcAGAAATCGTGGTGAAATTCTCACTAAAGATACC
CATAGAGAAAGCATTTCGTGAAAAATAATTGCAGTGTCTATTAGTGATTC
TTACTCCTTCGGGAGTAGAACTTCGGGAGTAGAACTTATTCCGAAAGCAT
ACGGAGGGCTCATAACTATTTTTTCTTTCGTTCACAGGGTTTAGAAGGTG
ATCAAATAATCGAAGACGCTTTAAAAGCACCATCAAATTTTGTACTAAAG
CCTCAGCGAGAGGGAGGAGGTCAGTGCTTGCTTTGGTTGTCTCCTCTGGT
TACGACTGCTCTTTATTTATTAActtctctttaattcgatctcAAGGGAC
CATAACtaatttcttcgaattagagaaagattcgaatcatAGAGAGCATT
TTACACTATTGACAGATTTGGAATTTTCTTCTTCTAGAATATTGACTTGG
TGAGACGTTTGAAAGCATTCACTCAGACACTTAGTCGCCAGACAGGACCT
TAGTTAAATAAATGTGATGTTGCTATTGAGGTGTTACTTTCTTTTTAGAG
AGTCTTTACACAAGGACTTTTAGCTATTTAAATTCTATCTGACAAATGAA
TTTTGGagtatttcatttgtttttcccCGTATCTAGGTAACAATCTGTAC
GATCAAGAAATGGTAGATGAACTACGGCGTATCTCTAACGATCCTGAAGA
GAGAAGTCAATATATTCTCATGGAACGTATTCGGCCACCTGTTGTACATA
GTTATATCGTGCGCCCTGAATCTCTCAACCCCATGGAAAGTGAAATCGTA
TCAGAGTTGGGAATTCTAGGAGTTATAATGAGGTGAGtgcatcaaaataa
aattaactTTGAGCACGTGATAAGTCTCCTCCTTTCTCATTATGAAAATT
CTGAATATTCAAAAATCCAAATAATCTTTCTTTTTAACCCTGCCACCTTT
CCCAAACTATATATTAACTATCTTTAAATCTATTCATCAAAACCGAATCC
CTGAAAGGTTTTTCTCCTTTGGGTTTGTTGAATCAAACTAGCCTGCCAat
atacccccttctcacagacccgtaACAGatcaaaactcgatggggattga
tattccgaTGCCTTTTATGGCTGGAGATTTGAACTTAATTGTTTTGAGCC
AAGAAATTCAGTGgtgatggaaaaaatagcattgCAGTGAGAATTTGATT
ATCTGATTACAAAAATTAGGGCATACTTTTTCACTGGAACaatattttca
ccaattttttcagtgggaaggggtcccagtgggtctgtgagaaggggatg
tgcCAATACCACTTGGAAGTGCAAATCTTTTCTTTCAACCATCAAAAGCA
AAGGAAATTGAGTGTTTGTTAAAAAAGACTATTATCTATATATGATAGTG
AATGAACTATACTGATGGATATGAAACAGGCGTGAGTGCTAACAATTGAG
ATCAAAGCCCCGAAGCGGCTAGAgaggaatagaccttttcataaattaca
tcacgaacatcacttgcctcgttttgaaattattgccatggtgattaact
cccagcggattttattaaaactacattactattcaaaaaatatcatttaa
tgtctcaagggccATAATCaatatggtaattgtttgaatacgaggcaagt
aaTGTTCAAGAGTTTCAACTCTAGCCAAATCAATGAGTTAACAGATTCAT
AAAAGGTGGATCCATTGAGTTtgaaacccgaagggctagagtagaatctt
taacctttcgcAGGacaaaaaagtgaagccacttattcccCATCCAGCAC
GCGTCTAGAACGCGAGGCAATCATGacaacggattgtatctagcagttcc
tttgtttttgaggattgcattttttgaaaactagCCATAGATTttaccag
aggaatgtaaagagatggaaaaacagcttttctgattactcaaagttcaa
cgatcacctCTAtcgaaaattctattgtaaaaacgttgattaggtcatta
aatgaaagtccagaaaagacggctcgccatacaaatcggacggtttctac
atgatttgacaataaaaaagaaaatttgtttttccttttttgccgattac
tagttcaatttttaagaataaggagcaatatttttaccaatgtatagcaa
aagaaattcttaacgcaatgatattaaattggttcttgtaaaactgtccg
aagtcgagtaaaatcaagatgaagttataattttctcgagctctagcttt
ccatattatggtgcggtcatgatgcggttatatcagtagaatcgctagga
aattctgtgcaagaagatataggtaccttttcgtataggagaggtgtacc
caaaatataagccctaaaagtttgcgcataatcaggcttgaaacaaaaaa
aatttatcacaacacgctaattttttttatagcgacaacaaaagaaacct
atttactcgacataaactcccttaagggcaagaaacctggtatatgacga
gccgtttttccattgtatACATAATTCGTTTTCTCTTTTAATCATTATAG
TGATGGTGATGATATTATACAAAACGAAAGTTGCGGCCATTTattgaaat
cgaaagattgGCAACGTGGTGAGGGTGGACTCATCGCTGGTAGAGCTGGC
ATCGATTCGCCTTGTCTCATTTAACCAATAATGATGACGTCTGTATAAGT
GAGGCCCCCATATGATGGCGTGATCTATGAGTTCAAAAATTGTCTTGTTT
AACCAATGACAGATAccctttttttgttatttttgggTGCTGGATCGACT
CGCTTTGTCTCCTTTAACTAATAATGATGTTTGTTTGATAAGTTTGTGTC
CTCGCCTCACACAATAGCGGCGTTCCTCAGTTAACCGTTTTTTCTGGTTG
GGAGGGTTCTGATTACTGCGGATTACCGATTATTTGAGTCAATTTACGAA
ATTTAAGAATTACTGAGATTTTGACATACAAATAAGGCTATTTCCGATAC
CGAATCAATTTTAGGGTTAAAATGGTCGATTTCTACAATACGAAATCTCT
TACGCCCCCCTCCCCACCTGATAGACCATTGACTTCCAAACCCGAAGGAG
CTATCAAGACTGACTATCGTATGGGATGTGATACAAACAATACACACAAA
GTCCTGGCTATATTTTATTAATACAACTCCAAAATTGTAACcttaaatat
aaatattttaaaattctgcattaaaatatttttttaattaattttcttaa
aaatttcattcatatttttgtatttaaaaattttagtttggataatatta
tttttgttgAATATCTTTTTGACACTATTTATATCGATTGTCTATCAATA
TAATAGCCTCCAGGGGGAAACCACCCCCCTTTTGAAGGTAGCCTAACCTT
GTGATGTTTTTATCGCTATTTAATTTGCAGTAATGTTGAGAGTAAAGTGT
GGGTACAAAGAGTATGCTTTGTTATTCTGGGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014827XLOC_014827Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026409-exon-sc0000571-1491911889:29099..29116TCONS_00026409-exon-sc0000571-1491911889:29099..29116Clytia hemisphaericaexon
TCONS_00026409-exon-sc0000571-1510915933:29099..29116TCONS_00026409-exon-sc0000571-1510915933:29099..29116Clytia hemisphaericaexon
TCONS_00026409-exon-sc0000571-1575043694:29099..29116TCONS_00026409-exon-sc0000571-1575043694:29099..29116Clytia hemisphaericaexon
TCONS_00026409-exon-sc0000571-1491911889:50486..50567TCONS_00026409-exon-sc0000571-1491911889:50486..50567Clytia hemisphaericaexon
TCONS_00026409-exon-sc0000571-1510915933:50486..50567TCONS_00026409-exon-sc0000571-1510915933:50486..50567Clytia hemisphaericaexon
TCONS_00026409-exon-sc0000571-1575043694:50486..50567TCONS_00026409-exon-sc0000571-1575043694:50486..50567Clytia hemisphaericaexon
TCONS_00026409-exon-sc0000571-1491911889:50935..51130TCONS_00026409-exon-sc0000571-1491911889:50935..51130Clytia hemisphaericaexon
TCONS_00026409-exon-sc0000571-1510915933:50935..51130TCONS_00026409-exon-sc0000571-1510915933:50935..51130Clytia hemisphaericaexon
TCONS_00026409-exon-sc0000571-1575043694:50935..51130TCONS_00026409-exon-sc0000571-1575043694:50935..51130Clytia hemisphaericaexon
TCONS_00026409-exon-sc0000571-1491911889:52849..52996TCONS_00026409-exon-sc0000571-1491911889:52849..52996Clytia hemisphaericaexon
TCONS_00026409-exon-sc0000571-1510915933:52849..52996TCONS_00026409-exon-sc0000571-1510915933:52849..52996Clytia hemisphaericaexon
TCONS_00026409-exon-sc0000571-1575043694:52849..52996TCONS_00026409-exon-sc0000571-1575043694:52849..52996Clytia hemisphaericaexon
TCONS_00026409-exon-sc0000571-1491911889:53313..53780TCONS_00026409-exon-sc0000571-1491911889:53313..53780Clytia hemisphaericaexon
TCONS_00026409-exon-sc0000571-1510915933:53313..53780TCONS_00026409-exon-sc0000571-1510915933:53313..53780Clytia hemisphaericaexon
TCONS_00026409-exon-sc0000571-1575043694:53313..53780TCONS_00026409-exon-sc0000571-1575043694:53313..53780Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000571supercontigsc0000571:29099..53780 +
Expression
No biomaterial libraries express this feature.
Blast
[Close]
BLAST of TCONS_00026409 vs. Swiss-Prot (Human)
Match: GSHB (Glutathione synthetase OS=Homo sapiens GN=GSS PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.473e-34
Identity = 69/136 (50.74%), Postives = 93/136 (68.38%), Query Frame = 1 
Query:    1 LYSLDEGLEGDQIIEDALKAPSNFVLKPQREGGGNNLYDQEMVDELRRISNDPEERSQYILMERIRPPVVHSYIVRPESLNPMESEIVSELGILGVIMSDGDDIIQNESCGHLLKSKDWQRGEGGLIAGRAGIDSP 408
            LYSLD G EGDQ I +AL APS FVLKPQREGGGNNLY +EMV  L+++  D EER+ YILME+I P    + ++RP S   +  + +SELGI GV +     ++ N+  GHLL++K  +  +GG+ AG A +D+P
Sbjct:  338 LYSLDVGEEGDQAIAEALAAPSRFVLKPQREGGGNNLYGEEMVQALKQL-KDSEERASYILMEKIEPEPFENCLLRPGSPARV-VQCISELGIFGVYVRQEKTLVMNKHVGHLLRTKAIEHADGGVAAGVAVLDNP 471
The following BLAST results are available for this feature:
BLAST of TCONS_00026409 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GSHB1.473e-3450.74Glutathione synthetase OS=Homo sapiens GN=GSS PE=1... [more]
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