TCONS_00026658 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026658
Unique NameTCONS_00026658
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length108

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026658 ID=TCONS_00026658|Name=TCONS_00026658|organism=Clytia hemisphaerica|type=transcript|length=108bp
NNGGTCCAACTTTGGATTTTGATTTACTATGCTTTTTTGCATATgcataa
aaaaatttaggattgttttttattgattctgtTGCCTTCCTTTCCTGGCT
TTTCATAT
Run BLAST on NCBI

transcript from alignment at sc0000580:16097..16204

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026658 ID=TCONS_00026658|Name=TCONS_00026658|organism=Clytia hemisphaerica|type=transcript|length=108bp|location=Sequence derived from alignment at sc0000580:16097..16204 (Clytia hemisphaerica)
ATATGAAAAGCCAGGAAAGGAAGGCAacagaatcaataaaaaacaatcct
aaatttttttatgcATATGCAAAAAAGCATAGTAAATCAAAATCCAAAGT
TGGACCNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015000XLOC_015000Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026658-exon-sc0000580-1491911889:16097..16204TCONS_00026658-exon-sc0000580-1491911889:16097..16204Clytia hemisphaericaexon
TCONS_00026658-exon-sc0000580-1510915933:16097..16204TCONS_00026658-exon-sc0000580-1510915933:16097..16204Clytia hemisphaericaexon
TCONS_00026658-exon-sc0000580-1575043694:16097..16204TCONS_00026658-exon-sc0000580-1575043694:16097..16204Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000580supercontigsc0000580:16097..16204 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00026658 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top