TCONS_00026760 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026760
Unique NameTCONS_00026760
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length256

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026760 ID=TCONS_00026760|Name=TCONS_00026760|organism=Clytia hemisphaerica|type=transcript|length=256bp
NAAGTTCTGCGTCTTTATGGTTATATAACCAAGTTTCTGACAATCCAACA
AAAAGTTGGTTTTCATTACAAACATTATCTTTAATAAAGGGAACTTTGCT
GGGTACTATTTGTGGACAAAGCCCTTGTATGTTAAAAAATGCAAAGCTAT
TCACTACTGGAATGTTTGCATCGGGTTGAATGGTAGTTGAGGGATTTGGA
ATGGTGGTCTGAGCGGTAGTCCTTGTGGGGGTATCAGATGAGTCTGTTGT
GGAGGN
Run BLAST on NCBI

transcript from alignment at sc0000582:19890..20145

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026760 ID=TCONS_00026760|Name=TCONS_00026760|organism=Clytia hemisphaerica|type=transcript|length=256bp|location=Sequence derived from alignment at sc0000582:19890..20145 (Clytia hemisphaerica)
NCCTCCACAACAGACTCATCTGATACCCCCACAAGGACTACCGCTCAGAC
CACCATTCCAAATCCCTCAACTACCATTCAACCCGATGCAAACATTCCAG
TAGTGAATAGCTTTGCATTTTTTAACATACAAGGGCTTTGTCCACAAATA
GTACCCAGCAAAGTTCCCTTTATTAAAGATAATGTTTGTAATGAAAACCA
ACTTTTTGTTGGATTGTCAGAAACTTGGTTATATAACCATAAAGACGCAG
AACTTN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015035XLOC_015035Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026760-exon-sc0000582-1491911889:19890..20145TCONS_00026760-exon-sc0000582-1491911889:19890..20145Clytia hemisphaericaexon
TCONS_00026760-exon-sc0000582-1510915933:19890..20145TCONS_00026760-exon-sc0000582-1510915933:19890..20145Clytia hemisphaericaexon
TCONS_00026760-exon-sc0000582-1575043694:19890..20145TCONS_00026760-exon-sc0000582-1575043694:19890..20145Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000582supercontigsc0000582:19890..20145 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.49012	6.9395	3.17372	4.37083	22.8302	12.6439	11.665	23.296	3.75271	3.53058	0.811365	3.6675	2.52999	1.14856	2.58573	1.179	7.74135	0.667342	0	3.88186	1.7118	2.06171	0	0	7.13786	3.64412	0	0	2.96728	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00026760 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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