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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00026822 ID=TCONS_00026822|Name=TCONS_00026822|organism=Clytia hemisphaerica|type=transcript|length=430bp
GTCTAGTGATAGTTGGTTGCAAATGGATGCATATCAGTATGTTTATGGAG
TTGTGACGGAAGATGTTAAAAAGGCTGCACCACTCGCTGGCTATCAATAT
TACGTCCAAGCTCGTGACTCGTCAGGGCGTACCGCCAACATTTCATACAT
TGTCAAAGTGGCGTCGTCCATCAAATCTTTTGACGTCTATTTTCGTTTGG
GATTTCAAAGTAAATATGGAGAGAGTGTACCCACTGCGACGCTTTTGAAC
ACACTGGTACAAAAATTGTCAAAGTATATTGACCCTGATGATACGGTTGG
CAAGATATACGTCAAAGAATTAACATTCCCGAACAGCTTACTATTCTCAC
ATTGCGATTTGTCGCCTGATTGCACACAAGAGAAAGTCGCATCCATCGTC
CAACGTTTAACTTCATCTGCAGCAGACCAA Run BLAST on NCBI transcript from alignment at sc0000589:98446..99841- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00026822 ID=TCONS_00026822|Name=TCONS_00026822|organism=Clytia hemisphaerica|type=transcript|length=1396bp|location=Sequence derived from alignment at sc0000589:98446..99841- (Clytia hemisphaerica)
GTCTAGTGATAGTTGGTTGCAAATGGATGCATATCAGTATGTTTATGGAG
TTGTGACGGAAGATGTTAAAAAGGCTGCACCACTCGGTAAGTTTAGCAAT
TTTATGTTTGTGTAATTTCCTGTGATGGAGACGGTCAGCTTTCGATTTGT
CTAGATCCTGATCAACTGAGGACAACGATAAACAAGCACTTTTAACGGTC
CTCGATTTTGTTGCTCAGAACTCTGGGTTGCTTCAACTAGCGTGGTGGTT
ATCCTTTATACGTATCTACTGGCGGTAAACAGATAAAAAAAAACATAAAC
AAAACTAGACTGTGAACAAAGTTTACCACTTGGACTTCCAGGCTATCATC
GAGCCAGGTAGAACATTTTTCGTTATAGCATGTGTTTTCTCTTATTTTCC
AATATATTAAATAATTTTTATTTTACCTGTTAGCTGGCTATCAATATTAC
GTCCAAGCTCGTGACTCGTCAGGGCGTACCGCCAACATTTCATACATTGT
CAAAGTGGCGTCGTCCATCAAATCTTTTGACGTCTATTTTCGTTTGGGAT
TTCAAAGTAAATATGGAGAGAGTGTACCCACTGCGACGCTTTTGAACACA
CTGGTACAAAAATTGTCAAAGTATATTGACCCTGATGATACGGTATAACC
TTGTTTTTTTTTGAAGAAATGTTTTAGTGAATTGCAAACAAGGTGATACG
ACCACAGCTCAGCTGCGAAAAAAATGCTGACGTTATCAATAATCTGATAT
CACCGATTGGTTCCCATAAAATTTTGCCAACTGAACTAAGAAACAACTCC
AACAAATCCCAGACCTTTATACCTCTTTGAAGTACTTTTATGTTGCAAGA
GCCCTGACTACTGAACTAAAATTGGAGTTTAAAAATCAATTTTGCATCTC
TAATGCAATTAACGCTTTAACGACCAAGCCATCTATTCTAGCCTAAAAGC
TCATTAGGGAATAGTCATGGACTTTATCCATGCAGCAAACTTATTTATAT
ACGGTTCCTTGAGTGCCCCATCTAGGAAGTCCCACGGTTACAATAAGGTT
CAGACTGAGCCTCTGGCTCGATGAATCCATTATAAATGCTCTAAAAACGT
CAATTTATTTTAATGTTTTGACGACGCACATTCTTCTTTGGAAATACTCT
CTGATCGCTGTATGCTTGTTTTCTTATAAATTTGAAAGTATGTAAGCTGC
CAAGATAACGTTGAAAACAAAGGAATGTCATATTTTATGTTCTGGATTTT
CATTTTCTTAGACTGGCAAGATATACGTCAAAGAATTAACATTCCCGAAC
AGCTTACTATTCTCACATTGCGATTTGTCGCCTGATTGCACACAAGAGAA
AGTCGCATCCATCGTCCAACGTTTAACTTCATCTGCAGCAGACCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00026822-exon-sc0000589-1575043694:99756..99841 | TCONS_00026822-exon-sc0000589-1575043694:99756..99841 | Clytia hemisphaerica | exon |
| TCONS_00026822-exon-sc0000589-1575043694:99198..99408 | TCONS_00026822-exon-sc0000589-1575043694:99198..99408 | Clytia hemisphaerica | exon |
| TCONS_00026822-exon-sc0000589-1575043694:98446..98578 | TCONS_00026822-exon-sc0000589-1575043694:98446..98578 | Clytia hemisphaerica | exon |
| TCONS_00026822-exon-sc0000589-1510915933:99756..99841 | TCONS_00026822-exon-sc0000589-1510915933:99756..99841 | Clytia hemisphaerica | exon |
| TCONS_00026822-exon-sc0000589-1510915933:99198..99408 | TCONS_00026822-exon-sc0000589-1510915933:99198..99408 | Clytia hemisphaerica | exon |
| TCONS_00026822-exon-sc0000589-1510915933:98446..98578 | TCONS_00026822-exon-sc0000589-1510915933:98446..98578 | Clytia hemisphaerica | exon |
| TCONS_00026822-exon-sc0000589-1491911889:99756..99841 | TCONS_00026822-exon-sc0000589-1491911889:99756..99841 | Clytia hemisphaerica | exon |
| TCONS_00026822-exon-sc0000589-1491911889:99198..99408 | TCONS_00026822-exon-sc0000589-1491911889:99198..99408 | Clytia hemisphaerica | exon |
| TCONS_00026822-exon-sc0000589-1491911889:98446..98578 | TCONS_00026822-exon-sc0000589-1491911889:98446..98578 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000589 | supercontig | sc0000589:98446..99841 - |
Blast
The following BLAST results are available for this feature:
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