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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00026889 ID=TCONS_00026889|Name=TCONS_00026889|organism=Clytia hemisphaerica|type=transcript|length=1858bp
GTgaaatttattattattttttgttttttcttatcatttagctttatcaa
aaataaaaaaatataataaaatctcCTCGGgaatataataaataaaattt
cttattcTGCAtagtaatttaattttttaataataTAAAAGCtctttttt
tgaacaaaataacatttttgGGGACTTAGaagttgaataaaatttatTCA
GTTTAGTGACAGGACCgagaaaattctcatttttacaTTGGCAAAGTGAA
AAAGTTATTTCAATATCTCTTATACTACATCTTACATCCCAAACTGTACG
TAACGTTGAACGTTGTTATAACGTCCATCTAGCGTTATATAGATGTCGAA
ATAACGGTGTATACCATCTAGGGTCTCACTCTGAAAAGCCTGTCAAAAAC
ACACAAAATCGCTCTTGGAAATAAGTATCACAGGGTAGaaggaaaaagag
aaaaacattcGATAAATGTTATATGTGTGTGCTATAATGGTTTATTGTTA
TTAGAATGGTAATATACATATGTATCATCTTGAGAGagttttgattgttt
ccatTTACGATTACTACCGCAACATGCCTTTGCAGGCAAATAACATAACA
TACAGGGCAAGAAAATTGCCATAAGTCCCATACAAACGTAACGTCCAACT
ACAGATTTCGTGGAGCCCTGACAAGAGCATGGTTCTATTAATTCCCCTTT
TTCATCCTTAAAATTAGCTGATTTTATACACCACATGCATGTACAAGTGT
CTATTACTCCATTACGttttaatgactttttcttttttaaacattCAGTT
TCTATACTGCCGTTTTGGTATTCAGCCATTGTGTTTTTCTTAATAAGTTC
TTTATAATGTTGGGTATCTTTGAATTTCACATAATGGTCTTTTTGTTGAG
TGCTGCAGGTGTTTTTAGAAGGTGAGAAGTTGGATTTGGTATTAGCTTTT
ATAAGACAGTAATCATCCTCAGTTTGAGTGTTATAATCTGGAAAAGTGTT
TTGTGTATTTGTTGAAGATAATAAACGAGATGAAGGATTTTTAGCGTTCA
ATTTAGTAGTATTACAACTTGTTGGCGGTGGCGGAATATGTTTTAAACGT
CCTGaagaattttttaataattgtGGCGTAGATGAAGGTGTATGTGTAGG
TGATTTATTTGTAGGGTATGAGCTACATGATTTGGCTCTAGTCCTTGATG
TCCTTGTCGGACAAGTCGTTTTACGATTCAAATCTCTATCGTTAATATAT
CCACTACTATTTCTTGAACAAGTCGGTGATAAAGATGGGTTCATGTTGGT
TTTCGATTTTGGCATATTGTTAAGTTCTTGAAAAGCTCTCATAAATGTTT
GACGGTCTTTAGTAGCAGGGACGAAAAAATAATGTGTGCTAGCATCTTCG
TCGTCGTATATAGCGTAAGGGTCGATAAatttctttgttgttgttgatgt
tgATGATAATAAACGAGATGAAGGATTTTTAGCGTTCAATTTAGTAGTAT
TACAACTTGTTGGCGGTGGCGGAATATGTTTTAAACGTCCTGaagaattt
tttaataattgtGGCGTAGATGAAGGTGTATGTGTAGGTGATTTATTTGT
AGGGTATGAGCTACATGATTTGGCTCTAGTCCTTGATGTCCTTGTCGGAC
AAGTCGTTTTACGATTCAAATCTCTATCGTTAATATATCCACTACTATTT
CTTGAACAAGTCGGTGATAAAGATGGGTTCATGTTGGTTTTCGATTTTGG
CATATTGTTAAGTTCTTGAAAAGCTCTCATAAATGTTTGACGGTCTTTAG
TAGCAGGGACGAAAAAATAATGTGTGCTAGCATCTTCGTCGTCGTATATA
GCGTAAGG Run BLAST on NCBI transcript from alignment at sc0000594:153194..155670- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00026889 ID=TCONS_00026889|Name=TCONS_00026889|organism=Clytia hemisphaerica|type=transcript|length=2477bp|location=Sequence derived from alignment at sc0000594:153194..155670- (Clytia hemisphaerica)
GTGAAATTTATTATTATTTTTTGTTTTTTCTTATCATTTAGCTTTATCAA
AAATAAAAAAATATAATAAAATCTCCTCGGGAATATAATAAATAAAATTT
CTTATTCTGCATAGTAATTTAATTTTTTAATAATATAAAAGCTCTTTTTT
TGAACAAAATAACATTTTTGGGGACTTAGAAGTTGAATAAAATTTATTCA
GTTTAGTGACAGGACCGAGAAAATTCTCATTTTTACATTGGCAAAGTGAA
AAAGTTATTTCAATATCTCTTATACTACATCTTACATCCCAAACTGTACG
TAACGTTGAACGTTGTTATAACGTCCATCTAGCGTTATATAGATGTCGAA
ATAACGGTGTATACCATCTAGGGTCTCACTCTGAAAAGCCTGTCAAAAAC
ACACAAAATCGCTCTTGGAAATAAGTATCACAGGGTAGAAGGAAAAAGAG
AAAAACATTCGATAAATGTTATATGTGTGTGCTATAATGGTTTATTGTTA
TTAGAATGGTAATATACATATGTATCATCTTGAGAGAGTTTTGATTGTTT
CCATTTACGATTACTACCGCAACATGCCTTTGCAGGCAAATAACATAACA
TACAGGGCAAGAAAATTGCCATAAGTCCCATACAAACGTAACGTCCAACT
ACAGATTTCGTGGAGCCCTGACAAGAGCATGGTTCTATTAATTCCCCTTT
TTCATCCTTAAAATTAGCTGATTTTATACACCACATGCATGTACAAGTGT
CTATTACTCCATTACGTTTTAATGACTTTTTCTTTTTTAAACATTCAGTT
TCTATACTGCCGTTTTGGTATTCAGCCATTGTGTTTTTCTTAATAAGTTC
TTTATAATGTTGGGTATCTTTGAATTTCACATAATGGTCTTTTTGTTGAG
TGCTGCAGGTGTTTTTAGAAGGTGAGAAGTTGGATTTGGTATTAGCTTTT
ATAAGACAGTAATCATCCTCAGTTTGAGTGTTATAATCTGGAAAAGTGTT
TTGTGTATTTGTTGAAGATAATAAACGAGATGAAGGATTTTTAGCGTTCA
ATTTAGTAGTATTACAACTTGTTGGCGGTGGCGGAATATGTTTTAAACGT
CCTGAAGAATTTTTTAATAATTGTGGCGTAGATGAAGGTGTATGTGTAGG
TGATTTATTTGTAGGGTATGAGCTACATGATTTGGCTCTAGTCCTTGATG
TCCTTGTCGGACAAGTCGTTTTACGATTCAAATCTCTATCGTTAATATAT
CCACTACTATTTCTTGAACAAGTCGGTGATAAAGATGGGTTCATGTTGGT
TTTCGATTTTGGCATATTGTTAAGTTCTTGAAAAGCTCTCATAAATGTTT
GACGGTCTTTAGTAGCAGGGACGAAAAAATAATGTGTGCTAGCATCTTCG
TCGTCGTATATAGCGTAAGGGTCGATAAATTTCTTTGTTGTTGTTGATGT
TGATGGTTTAGTGCTTCTGTCCACACCGGGAAGGTTCATATAATCTTCGT
TTATCATTTTATTAACATGTCGTGTTTATTGCTGAAAAAATAATTAAGAA
TCAGTTGAGTTTAAGTAAAATTTAAAACAGTTATAATAATGTATATATGC
TGTATCAAGGGAGAGACTATATCTGAAAAAACGCGCGCTTACTCTTCTCA
CCCTTGTATCACAAAAGAAAACTATAAATCGTACCAAATCGCTTCAATCT
TATAACAAAGTATGAAAAATGATTTCACAAAATGTACTCTATTACATCTG
AAATGAATGGACATGTCTTTTTCATAATAAGCTTTTTTTATTAAGATACC
AAAAAAAACACAAATCAAATATATTCCAAAGTATGAAATCGAAGTCATAA
AAGTTTATTAAAAAATCTTAAAGTACACATCTGCAAGAAAACACGAAATA
GCAATAACAACATTGACATGAAACGAACTTTCTNCACATAATGGTCTTTT
TGTTGAGTGCTGCAGGTGTTTTTAGAAGGTGAGAAGTTGGATTTGGTATT
AGCTTTTATAAGACAGTAATCATCCTCAGTTTGAGTGTTATAATCTGGAA
AAGTGTTTTGTGTATTTGTTGAAGATAATAAACGAGATGAAGGATTTTTA
GCGTTCAATTTAGTAGTATTACAACTTGTTGGCGGTGGCGGAATATGTTT
TAAACGTCCTGAAGAATTTTTTAATAATTGTGGCGTAGATGAAGGTGTAT
GTGTAGGTGATTTATTTGTAGGGTATGAGCTACATGATTTGGCTCTAGTC
CTTGATGTCCTTGTCGGACAAGTCGTTTTACGATTCAAATCTCTATCGTT
AATATATCCACTACTATTTCTTGAACAAGTCGGTGATAAAGATGGGTTCA
TGTTGGTTTTCGATTTTGGCATATTGTTAAGTTCTTGAAAAGCTCTCATA
AATGTTTGACGGTCTTTAGTAGCAGGGACGAAAAAATAATGTGTGCTAGC
ATCTTCGTCGTCGTATATAGCGTAAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00026889-exon-sc0000594-1575043694:154216..155670 | TCONS_00026889-exon-sc0000594-1575043694:154216..155670 | Clytia hemisphaerica | exon |
| TCONS_00026889-exon-sc0000594-1575043694:153194..153596 | TCONS_00026889-exon-sc0000594-1575043694:153194..153596 | Clytia hemisphaerica | exon |
| TCONS_00026889-exon-sc0000594-1510915933:154216..155670 | TCONS_00026889-exon-sc0000594-1510915933:154216..155670 | Clytia hemisphaerica | exon |
| TCONS_00026889-exon-sc0000594-1510915933:153194..153596 | TCONS_00026889-exon-sc0000594-1510915933:153194..153596 | Clytia hemisphaerica | exon |
| TCONS_00026889-exon-sc0000594-1491911889:154216..155670 | TCONS_00026889-exon-sc0000594-1491911889:154216..155670 | Clytia hemisphaerica | exon |
| TCONS_00026889-exon-sc0000594-1491911889:153194..153596 | TCONS_00026889-exon-sc0000594-1491911889:153194..153596 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000594 | supercontig | sc0000594:153194..155670 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR007875 | Sprouty |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007275 | multicellular organism development |
| GO:0009966 | regulation of signal transduction |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007275 |
multicellular organism development |
| biological_process |
GO:0009966 |
regulation of signal transduction |
| cellular_component |
GO:0016020 |
membrane |
Blast
The following BLAST results are available for this feature:
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