TCONS_00026970 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026970
Unique NameTCONS_00026970
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1770

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026970 ID=TCONS_00026970|Name=TCONS_00026970|organism=Clytia hemisphaerica|type=transcript|length=1770bp
CAAAATACGATGTCAAGACAAACAATTACTTTCACTCAATCTCAATTTCA
AAGATCTTTTTGCGCTGTATAAAATGAAGTACAACCTATTTATTATCAGT
CATATATCAGCAAAAAGATCATCAGAGTCGTACGAACTAGACCATCAAAC
GCGCAAAGTCCCAGACAGCTATGGGTTGGAAGCTTTTAGTATTACTTCTG
CtatttgatgtggtttttatgaaagttatTATTGATAAAACAAAGTTAAT
GAAAACTGAAGATTTTGATAAGACAAATTTTATTGATGTCCGAGATTTAT
ATCAGAAGGAATCTGAGCAAATGGAGCGTCCGAGAAAAGACATTACTTTG
GCATTAAATTTACCATATACAAGGCCTCTTAGTGAATATCCTGTCAGGTC
TGATTTAAACGCTCCGAGATTTTATGCATCCGCAGCTGCAATTGCTATAC
AAGATATCAACGCTAATCCTGATTTATTAAGAGGTTATCAGTTAAAATAT
TATTGGAACAAAACTATTACAGATACGCACTGTAATGAAGAAACAGCTGT
TAAGAACTTCAAGAAACAGATGACAATGAATTTTGATGGATTTATAGGTT
ATCAGTGTTCATGTACGAAAGTTGGTCGATTGGCAGCTCAAGCAAATCTC
CCTCTTTTCTCAATGGGTTGTCAGGAAGAAGATCTCTCAAACAAAACACT
GTATCCAACATTTAGCCGCACGACAAACCTTAACCCTGATGTCTCACAAA
TGATCAAAATGTTTctcaagaaacaaaaaatcaaagaacTTGCTGTCATC
TACCAAAAAGATATGTGGATCCATATAGAAGGAAATGGAAATATAAACAT
GTACTGggaaaaaatatacaaagatttaaagaaaaatgggaGTCGAGATA
ATGGATTCAATATTACACTTAGCAAGGAAATCGCACATTACGAATATTTT
GATGATGAATATAATTCACAGATATTCGaatcatttttgaaagattGTAA
ATCGAAAACGAAAGTAATCATGGTTATGCTAGAAAAAGGACGACTTCAAC
ATTTTATGATGACGGCAAGGAAAATGAATATGACAAATGGAGACTACGTA
TTTATCGCCGTACACCCGTTCGCAACTGCGGAACAATTTCTACGTAACAC
GCAAACATTAAAAGATTACGTTTGGGTGTTACCTTGGAGTGGTTATTACG
GCGATGGCAATAAGgaaaaagcttttttcttcggagaaaaaaacgaaatg
aTGGAAGCGTTCTCGAGACTCTTCGTTATCCAACCAAAGATTCCACGATc
agatgaagattttaaaggttttcaaaAACGTGTAGTTGAGGGGATGTCAA
AAGAACCTTTTCAAAGTGATGCTTATGAGAGAActttcattggtcaaaag
aaaggGACAAAAGTCAGCCCACCACCGGAAGCTCACCAACTGTATGATGC
AGTCATGTTGTACGCTCACGGATTGAACAAAACGTTATCCAAAGGATACA
GCGTAACCAATGGATCTGATATCATCCAAAATATACTCAACACTCGTCAT
ATAAGTATGTTACATAAACCCCAACCTCCttccctgcgtattattagCTA
TTAAATGTTCAGTGATATGGCTAGATATTTCTCTAGCGTCTATTAGTATA
ATAAAGCCTGGATTACATAGGGAAGAAAGTTGGTATAAACCTATTTCTAA
CATGAGAattaaaaatttcccaaaatttttgTAGGGCAGCCATATAGCGG
TTGTCGCACGGTCTAAAGCC
Run BLAST on NCBI

protein sequence of TCONS_00026970-protein

>TCONS_00026970-protein ID=TCONS_00026970-protein|Name=TCONS_00026970-protein|organism=Clytia hemisphaerica|type=polypeptide|length=477bp
MGWKLLVLLLLFDVVFMKVIIDKTKLMKTEDFDKTNFIDVRDLYQKESEQ
MERPRKDITLALNLPYTRPLSEYPVRSDLNAPRFYASAAAIAIQDINANP
DLLRGYQLKYYWNKTITDTHCNEETAVKNFKKQMTMNFDGFIGYQCSCTK
VGRLAAQANLPLFSMGCQEEDLSNKTLYPTFSRTTNLNPDVSQMIKMFLK
KQKIKELAVIYQKDMWIHIEGNGNINMYWEKIYKDLKKNGSRDNGFNITL
SKEIAHYEYFDDEYNSQIFESFLKDCKSKTKVIMVMLEKGRLQHFMMTAR
KMNMTNGDYVFIAVHPFATAEQFLRNTQTLKDYVWVLPWSGYYGDGNKEK
AFFFGEKNEMMEAFSRLFVIQPKIPRSDEDFKGFQKRVVEGMSKEPFQSD
AYERTFIGQKKGTKVSPPPEAHQLYDAVMLYAHGLNKTLSKGYSVTNGSD
IIQNILNTRHISMLHKPQPPSLRIISY
Run BLAST on NCBI

transcript from alignment at sc0000597:147410..152056-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026970 ID=TCONS_00026970|Name=TCONS_00026970|organism=Clytia hemisphaerica|type=transcript|length=4647bp|location=Sequence derived from alignment at sc0000597:147410..152056- (Clytia hemisphaerica)
CAAAATACGATGTCAAGACAAACAATTACTTTCACTCAATCTCAATTTCA
AAGATCTTTTTGCGCTGTATAAAATGAAGTACAACCTATTTATTATCAGT
CATATATCAGCAAAAAGATCATCAGAGTCGTACGAACTAGACCATCAAAC
GCGCAAAGTCCCAGACAGCTATGGGTTGGAAGCTTTTAGTATTACTTCTG
CTATTTGATGTGGTTTTTATGAAAGTTATTATTGATAAAACAAAGTTAAT
GAAAACTGAAGATTTTGATAAGACAAATTTTATTGATGTCCGAGATTTAT
ATCAGAAGGAATCTGAGCAAATGGAGCGTCCGAGAAAAGACATTACTTTG
GCATTAAATTTACCATATACAAGGCCTCTTAGTGAATATCCTGTCAGGTC
TGATTTAAACGCTCCGAGATTTTATGCATCCGCAGCTGCAATTGCTATAC
AAGATATCAACGCTAATCCTGATTTATTAAGAGGTTATCAGTTAAAATAT
TATTGGAACAAAACTATTACAGATACGCACTGTAATGAAGAAACAGCTGT
TAAGAACTTCAAGAAACAGATGACAATGAATTTTGATGGATTTATAGGTT
ATCAGTGTTCATGTACGAAAGTTGGTCGATTGGCAGCTCAAGCAAATCTC
CCTCTTTTCTCAATGGTAAGGCTCTATTTAACCTGAAATCAGATCGTCAT
TGTTTTTTGCACACGCCTTCAGAGGTTTACCGTGCGCTAAGAAAATTATG
ACCATCTTTTATCAGGTTAGTCTCATTTGAATCGTCATTAACATTTATTT
TAGTTCTATAACCTCGCCCTTTTTTTCTAAATGGTTCACTTTGAGAGTGT
AAGGTCATCTGGTATTCAGATGGCGTATTGGCGGCCGCCAACGCTAATGC
TCTAAAGGAGTGGTCCAATAAAAGTTTGCCCGACCTTCAGAGTAGAGTGA
TGTTTCGTAGCAAATTTTCACATCTGTTACCAGATAAATGGTCAAAATCA
GTCAATCACGTCACTTTCAACCAAATAAGCTGTTGAGTCCGTGAAAGATA
TTGCAATAGTGCATATCATGAATATTAGGTTTCTGCGCATCCTCTAGCGA
AAAAAGTTTCTTATAGGAAGTATATCTATAGAGGTCTGCTATTAAGCCTA
CATGAAAACTGTTGATTATAGGGTTGTCAGGAAGAAGATCTCTCAAACAA
AACACTGTATCCAACATTTAGCCGCACGACAAACCTTAACCCTGATGTCT
CACAAATGATCAAAATGTTTCTCAAGAAACAAAAAATCAAAGAACTTGCT
GTCATCTACCAAAAAGATATGTGGATCCATATAGAAGGAAATGGAAATAT
AAACATGTACTGGGAAAAAATATACAAAGATTTAAAGAAAAATGGGAGTC
GAGATAATGGATTCAATATTACACTTAGCAAGGAAATCGCACATTACGAA
TATTTTGATGATGAATATAATTCACAGATATTCGAATCATTTTTGAAAGA
TTGTAAATCGAAAACGAAAGGTAAAAATGCTTCTGCAGCTCTTTTTGACC
TTTTCTTCATTACTTATAAGTACAATGCCTTTTCGACATTATCTTTTATC
AACCTTAAATACACCTTTTCAACCGTAGCCGCTAATTGCCGTGCAGGCAT
TTTTTTGTCCATTTTACCACCCTAAAACCGCCCCAGTCTTTTTATCGCAC
CTAAAGACAATAGAAAAAAGTGTAACAAAAGGATTGGATCAAGTTTAAGG
TGGTAAATTAAATAATAATATGGCACGCGCCTAACTGCGCGACTACGGTC
GAAAAGGTGTATACTACCTGAGAAAAAGTTTTAACCGACTACAATTTTAC
CCGACGAAAAGTTTTGCCCAACTTAAATACTCCAAATTTTCCTTTTTTAA
ATATTTTTGTGTTTTGTTTACTCAGTAATCATGGTTATGCTAGAAAAAGG
ACGACTTCAACATTTTATGATGACGGCAAGGAAAATGAATATGACAAATG
GAGACTACGTATTTATCGCCGTACACCCGTTCGCAACTGCGGAACAATTT
CTACGTAACACGCAAACATTAAAAGATTACGTTTGGGTGTTACCTTGGAG
TGGTTATTACGGCGATGGCAATAAGGAAAAAGCTTTTTTCTTCGGAGAAA
AAAACGAAATGATGGAAGCGTTCTCGAGACTCTTCGTTATCCAACCAAAG
GTAAAAGTAGTTTTTACACAAACCCGATATCTACGGCTAATTTCAAAATT
CATTGCAGTAGAGAGTCTGTTGTCATTGACTTTTCTGATTTGAGATTAAG
CATGATTTGAGCACAAAAAAGTGAGATTTTAGAAAATGGGAACTGCTGTT
ATTTCGAATCATTTTGTTAAGTAGTTGCTTCCCTATGTTATAGATTCCAC
GATCAGATGAAGATTTTAAAGGTTTTCAAAAACGTGTAGTTGAGGGGATG
TCAAAAGAACCTTTTCAAAGTGATGCTTATGAGAGAACTTTCATTGGTCA
AAAGAAAGGGACAAAAGTCAGCGTGAGTATTATTTCTTTTTTCCCTCATA
ATGATAAGTGTTAGACAATGTTATTGTTCCTTACAGTGATATTAGAGGCG
GAAAATATGGCGGTATGGCGTTATGGCGGTATACAGAGAAAAAATTGGCG
GGAGAGTTTCGAAAACTGAAACGGAAACTCAAATTCATACGATTTTGGNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTTCCGTCACCGAAAATTCCTTTGAAATTCAATATTTTTG
TCGAAAATTCCGCAAATTTTGAATATCTTTTACCAATTCCGAAATTCCGC
AATTTTTTTTTCTAAATTCCGTTTTTCCGCACTAAAATTGTCTAATTTTC
CGTCTCCGTCAGAGAACCCAATTTCCGTAATTCCGTCCAAATTTTCGCCT
AATTCCGCCACTCCGCCCGAAAAAAGGGCCGATTCCGCTCCTCCGGCAAC
CATGAAACCCCCCCCTTGTTAAGTAGTTGCTTCCCTATGTTATAGATTCC
ACGATCAGATGAAGATTTTAAAGGTTTTCAAAAACGTGTAGTTGAGGGGA
TGTCAAAAGAACCTTTTCAAAGTGATGCTTATGAGAGAACTTTCATTGGT
CAAAAGAAAGGGACAAAAGTCAGCGTGAGTATTATTTCTTTTTTCCCTCA
TAATGATAAGTGTTAGACAATGTTATTGTTCCTTACAGTGATATTAGAGG
CGGAAAATATGGCGGTATGGCGTTATGGCGGTATACAGAGAAAAAATTGG
CGGGAGAGTTTCGAAAACTGAAACGGAAACTCAAATTCATACGATTTTGG
ATGTTTTTGTATTTTGCACCGAAATCGTATAGTCTAAGACTGGCAAACTC
TACCGACTGTAAACTCTTTTCGACAAAAAACTGTTTGCGATTTTTCTTCG
GCTTTGAGCTTTTTTCTTAGATTCGTCTTAGACTATGAGCGTAGTCTAAG
CCGGGGGATGTTTATCGTGTATAAAATCCCCGCCTGAGAGTTAGCCCCAT
TTCTGTGTTTTAAGGAATATTATACCGAATAGGCTGAGTGAAAGTTTCGC
TTTTTATGTGGTTTTACTCGAAAAACGAAGTCTTTCTTATCAAATTTGTG
GAGCGGCAATGAAAACGATGTAAATTGAAACCTCAAGATTGAGGTAATTC
TCGGACGGGAATTTTATACACCATAAGCCATCGCTATATTAAAATGAATT
ACGGGGATGCAGTCATAGACTGGGGTGAAGGAACATTTGTTTAGGACAGC
AAATTTAAACGACACAGTTATTATGCTTTTATATCATACATCAGGTAAGT
GCTTTGAGGTAAAAATCTGCTCTCCTACGCAGATCGTTCTCCACCTCTGT
CTGCGCTACTGGGGATGCACGCAGTCTATGGCAGTACCCAACTAGCACAC
AACGTTTTTTCGACGTTTATCTAACGTTCACAACGTTGTGTGCCAGCTGG
GTAATATCTTTAACCATTATTTTGTTTCTTCACTTCCTCATTCAGCCACC
ACCGGAAGCTCACCAACTGTATGATGCAGTCATGTTGTACGCTCACGGAT
TGAACAAAACGTTATCCAAAGGATACAGCGTAACCAATGGATCTGATATC
ATCCAAAATATACTCAACACTCGTCATATAAGTATGTTACATAAACCCCA
ACCTCCTTCCCTGCGTATTATTAGCTATTAAATGTTCAGTGATATGGCTA
GATATTTCTCTAGCGTCTATTAGTATAATAAAGCCTGGATTACATAGGGA
AGAAAGTTGGTATAAACCTATTTCTAACATGAGAATTAAAAATTTCCCAA
AATTTTTGTAGGGCAGCCATATAGCGGTTGTCGCACGGTCTAAAGCC

Coding sequence (CDS) from alignment at sc0000597:147410..152056-

>TCONS_00026970 ID=TCONS_00026970|Name=TCONS_00026970|organism=Clytia hemisphaerica|type=CDS|length=7170bp|location=Sequence derived from alignment at sc0000597:147410..152056- (Clytia hemisphaerica)
CCACCACCGGAAGCTCACCAACTGTATGATGCAGTCATGTTGTACGCTCA
CGGATTGAACAAAACGTTATCCAAAGGATACAGCGTAACCAATGGATCTG
ATATCATCCAAAATATACTCAACACTCGTCATATAAGTATGTTACATAAA
CCCCAACCTCCTTCCCTGCGTATTATTAGCTATTAAATTCCACGATCAGA
TGAAGATTTTAAAGGTTTTCAAAAACGTGTAGTTGAGGGGATGTCAAAAG
AACCTTTTCAAAGTGATGCTTATGAGAGAACTTTCATTGGTCAAAAGAAA
GGGACAAAAGTCAGCTAATCATGGTTATGCTAGAAAAAGGACGACTTCAA
CATTTTATGATGACGGCAAGGAAAATGAATATGACAAATGGAGACTACGT
ATTTATCGCCGTACACCCGTTCGCAACTGCGGAACAATTTCTACGTAACA
CGCAAACATTAAAAGATTACGTTTGGGTGTTACCTTGGAGTGGTTATTAC
GGCGATGGCAATAAGGAAAAAGCTTTTTTCTTCGGAGAAAAAAACGAAAT
GATGGAAGCGTTCTCGAGACTCTTCGTTATCCAACCAAAGGGTTGTCAGG
AAGAAGATCTCTCAAACAAAACACTGTATCCAACATTTAGCCGCACGACA
AACCTTAACCCTGATGTCTCACAAATGATCAAAATGTTTCTCAAGAAACA
AAAAATCAAAGAACTTGCTGTCATCTACCAAAAAGATATGTGGATCCATA
TAGAAGGAAATGGAAATATAAACATGTACTGGGAAAAAATATACAAAGAT
TTAAAGAAAAATGGGAGTCGAGATAATGGATTCAATATTACACTTAGCAA
GGAAATCGCACATTACGAATATTTTGATGATGAATATAATTCACAGATAT
TCGAATCATTTTTGAAAGATTGTAAATCGAAAACGAAAGATGGGTTGGAA
GCTTTTAGTATTACTTCTGCTATTTGATGTGGTTTTTATGAAAGTTATTA
TTGATAAAACAAAGTTAATGAAAACTGAAGATTTTGATAAGACAAATTTT
ATTGATGTCCGAGATTTATATCAGAAGGAATCTGAGCAAATGGAGCGTCC
GAGAAAAGACATTACTTTGGCATTAAATTTACCATATACAAGGCCTCTTA
GTGAATATCCTGTCAGGTCTGATTTAAACGCTCCGAGATTTTATGCATCC
GCAGCTGCAATTGCTATACAAGATATCAACGCTAATCCTGATTTATTAAG
AGGTTATCAGTTAAAATATTATTGGAACAAAACTATTACAGATACGCACT
GTAATGAAGAAACAGCTGTTAAGAACTTCAAGAAACAGATGACAATGAAT
TTTGATGGATTTATAGGTTATCAGTGTTCATGTACGAAAGTTGGTCGATT
GGCAGCTCAAGCAAATCTCCCTCTTTTCTCAATGCCACCACCGGAAGCTC
ACCAACTGTATGATGCAGTCATGTTGTACGCTCACGGATTGAACAAAACG
TTATCCAAAGGATACAGCGTAACCAATGGATCTGATATCATCCAAAATAT
ACTCAACACTCGTCATATAAGTATGTTACATAAACCCCAACCTCCTTCCC
TGCGTATTATTAGCTATTAAATTCCACGATCAGATGAAGATTTTAAAGGT
TTTCAAAAACGTGTAGTTGAGGGGATGTCAAAAGAACCTTTTCAAAGTGA
TGCTTATGAGAGAACTTTCATTGGTCAAAAGAAAGGGACAAAAGTCAGCT
AATCATGGTTATGCTAGAAAAAGGACGACTTCAACATTTTATGATGACGG
CAAGGAAAATGAATATGACAAATGGAGACTACGTATTTATCGCCGTACAC
CCGTTCGCAACTGCGGAACAATTTCTACGTAACACGCAAACATTAAAAGA
TTACGTTTGGGTGTTACCTTGGAGTGGTTATTACGGCGATGGCAATAAGG
AAAAAGCTTTTTTCTTCGGAGAAAAAAACGAAATGATGGAAGCGTTCTCG
AGACTCTTCGTTATCCAACCAAAGGGTTGTCAGGAAGAAGATCTCTCAAA
CAAAACACTGTATCCAACATTTAGCCGCACGACAAACCTTAACCCTGATG
TCTCACAAATGATCAAAATGTTTCTCAAGAAACAAAAAATCAAAGAACTT
GCTGTCATCTACCAAAAAGATATGTGGATCCATATAGAAGGAAATGGAAA
TATAAACATGTACTGGGAAAAAATATACAAAGATTTAAAGAAAAATGGGA
GTCGAGATAATGGATTCAATATTACACTTAGCAAGGAAATCGCACATTAC
GAATATTTTGATGATGAATATAATTCACAGATATTCGAATCATTTTTGAA
AGATTGTAAATCGAAAACGAAAGATGGGTTGGAAGCTTTTAGTATTACTT
CTGCTATTTGATGTGGTTTTTATGAAAGTTATTATTGATAAAACAAAGTT
AATGAAAACTGAAGATTTTGATAAGACAAATTTTATTGATGTCCGAGATT
TATATCAGAAGGAATCTGAGCAAATGGAGCGTCCGAGAAAAGACATTACT
TTGGCATTAAATTTACCATATACAAGGCCTCTTAGTGAATATCCTGTCAG
GTCTGATTTAAACGCTCCGAGATTTTATGCATCCGCAGCTGCAATTGCTA
TACAAGATATCAACGCTAATCCTGATTTATTAAGAGGTTATCAGTTAAAA
TATTATTGGAACAAAACTATTACAGATACGCACTGTAATGAAGAAACAGC
TGTTAAGAACTTCAAGAAACAGATGACAATGAATTTTGATGGATTTATAG
GTTATCAGTGTTCATGTACGAAAGTTGGTCGATTGGCAGCTCAAGCAAAT
CTCCCTCTTTTCTCAATGCCACCACCGGAAGCTCACCAACTGTATGATGC
AGTCATGTTGTACGCTCACGGATTGAACAAAACGTTATCCAAAGGATACA
GCGTAACCAATGGATCTGATATCATCCAAAATATACTCAACACTCGTCAT
ATAAGTATGTTACATAAACCCCAACCTCCTTCCCTGCGTATTATTAGCTA
TTAAATTCCACGATCAGATGAAGATTTTAAAGGTTTTCAAAAACGTGTAG
TTGAGGGGATGTCAAAAGAACCTTTTCAAAGTGATGCTTATGAGAGAACT
TTCATTGGTCAAAAGAAAGGGACAAAAGTCAGCTAATCATGGTTATGCTA
GAAAAAGGACGACTTCAACATTTTATGATGACGGCAAGGAAAATGAATAT
GACAAATGGAGACTACGTATTTATCGCCGTACACCCGTTCGCAACTGCGG
AACAATTTCTACGTAACACGCAAACATTAAAAGATTACGTTTGGGTGTTA
CCTTGGAGTGGTTATTACGGCGATGGCAATAAGGAAAAAGCTTTTTTCTT
CGGAGAAAAAAACGAAATGATGGAAGCGTTCTCGAGACTCTTCGTTATCC
AACCAAAGGGTTGTCAGGAAGAAGATCTCTCAAACAAAACACTGTATCCA
ACATTTAGCCGCACGACAAACCTTAACCCTGATGTCTCACAAATGATCAA
AATGTTTCTCAAGAAACAAAAAATCAAAGAACTTGCTGTCATCTACCAAA
AAGATATGTGGATCCATATAGAAGGAAATGGAAATATAAACATGTACTGG
GAAAAAATATACAAAGATTTAAAGAAAAATGGGAGTCGAGATAATGGATT
CAATATTACACTTAGCAAGGAAATCGCACATTACGAATATTTTGATGATG
AATATAATTCACAGATATTCGAATCATTTTTGAAAGATTGTAAATCGAAA
ACGAAAGATGGGTTGGAAGCTTTTAGTATTACTTCTGCTATTTGATGTGG
TTTTTATGAAAGTTATTATTGATAAAACAAAGTTAATGAAAACTGAAGAT
TTTGATAAGACAAATTTTATTGATGTCCGAGATTTATATCAGAAGGAATC
TGAGCAAATGGAGCGTCCGAGAAAAGACATTACTTTGGCATTAAATTTAC
CATATACAAGGCCTCTTAGTGAATATCCTGTCAGGTCTGATTTAAACGCT
CCGAGATTTTATGCATCCGCAGCTGCAATTGCTATACAAGATATCAACGC
TAATCCTGATTTATTAAGAGGTTATCAGTTAAAATATTATTGGAACAAAA
CTATTACAGATACGCACTGTAATGAAGAAACAGCTGTTAAGAACTTCAAG
AAACAGATGACAATGAATTTTGATGGATTTATAGGTTATCAGTGTTCATG
TACGAAAGTTGGTCGATTGGCAGCTCAAGCAAATCTCCCTCTTTTCTCAA
TGCCACCACCGGAAGCTCACCAACTGTATGATGCAGTCATGTTGTACGCT
CACGGATTGAACAAAACGTTATCCAAAGGATACAGCGTAACCAATGGATC
TGATATCATCCAAAATATACTCAACACTCGTCATATAAGTATGTTACATA
AACCCCAACCTCCTTCCCTGCGTATTATTAGCTATTAAATTCCACGATCA
GATGAAGATTTTAAAGGTTTTCAAAAACGTGTAGTTGAGGGGATGTCAAA
AGAACCTTTTCAAAGTGATGCTTATGAGAGAACTTTCATTGGTCAAAAGA
AAGGGACAAAAGTCAGCTAATCATGGTTATGCTAGAAAAAGGACGACTTC
AACATTTTATGATGACGGCAAGGAAAATGAATATGACAAATGGAGACTAC
GTATTTATCGCCGTACACCCGTTCGCAACTGCGGAACAATTTCTACGTAA
CACGCAAACATTAAAAGATTACGTTTGGGTGTTACCTTGGAGTGGTTATT
ACGGCGATGGCAATAAGGAAAAAGCTTTTTTCTTCGGAGAAAAAAACGAA
ATGATGGAAGCGTTCTCGAGACTCTTCGTTATCCAACCAAAGGGTTGTCA
GGAAGAAGATCTCTCAAACAAAACACTGTATCCAACATTTAGCCGCACGA
CAAACCTTAACCCTGATGTCTCACAAATGATCAAAATGTTTCTCAAGAAA
CAAAAAATCAAAGAACTTGCTGTCATCTACCAAAAAGATATGTGGATCCA
TATAGAAGGAAATGGAAATATAAACATGTACTGGGAAAAAATATACAAAG
ATTTAAAGAAAAATGGGAGTCGAGATAATGGATTCAATATTACACTTAGC
AAGGAAATCGCACATTACGAATATTTTGATGATGAATATAATTCACAGAT
ATTCGAATCATTTTTGAAAGATTGTAAATCGAAAACGAAAGATGGGTTGG
AAGCTTTTAGTATTACTTCTGCTATTTGATGTGGTTTTTATGAAAGTTAT
TATTGATAAAACAAAGTTAATGAAAACTGAAGATTTTGATAAGACAAATT
TTATTGATGTCCGAGATTTATATCAGAAGGAATCTGAGCAAATGGAGCGT
CCGAGAAAAGACATTACTTTGGCATTAAATTTACCATATACAAGGCCTCT
TAGTGAATATCCTGTCAGGTCTGATTTAAACGCTCCGAGATTTTATGCAT
CCGCAGCTGCAATTGCTATACAAGATATCAACGCTAATCCTGATTTATTA
AGAGGTTATCAGTTAAAATATTATTGGAACAAAACTATTACAGATACGCA
CTGTAATGAAGAAACAGCTGTTAAGAACTTCAAGAAACAGATGACAATGA
ATTTTGATGGATTTATAGGTTATCAGTGTTCATGTACGAAAGTTGGTCGA
TTGGCAGCTCAAGCAAATCTCCCTCTTTTCTCAATGCCACCACCGGAAGC
TCACCAACTGTATGATGCAGTCATGTTGTACGCTCACGGATTGAACAAAA
CGTTATCCAAAGGATACAGCGTAACCAATGGATCTGATATCATCCAAAAT
ATACTCAACACTCGTCATATAAGTATGTTACATAAACCCCAACCTCCTTC
CCTGCGTATTATTAGCTATTAAATTCCACGATCAGATGAAGATTTTAAAG
GTTTTCAAAAACGTGTAGTTGAGGGGATGTCAAAAGAACCTTTTCAAAGT
GATGCTTATGAGAGAACTTTCATTGGTCAAAAGAAAGGGACAAAAGTCAG
CTAATCATGGTTATGCTAGAAAAAGGACGACTTCAACATTTTATGATGAC
GGCAAGGAAAATGAATATGACAAATGGAGACTACGTATTTATCGCCGTAC
ACCCGTTCGCAACTGCGGAACAATTTCTACGTAACACGCAAACATTAAAA
GATTACGTTTGGGTGTTACCTTGGAGTGGTTATTACGGCGATGGCAATAA
GGAAAAAGCTTTTTTCTTCGGAGAAAAAAACGAAATGATGGAAGCGTTCT
CGAGACTCTTCGTTATCCAACCAAAGGGTTGTCAGGAAGAAGATCTCTCA
AACAAAACACTGTATCCAACATTTAGCCGCACGACAAACCTTAACCCTGA
TGTCTCACAAATGATCAAAATGTTTCTCAAGAAACAAAAAATCAAAGAAC
TTGCTGTCATCTACCAAAAAGATATGTGGATCCATATAGAAGGAAATGGA
AATATAAACATGTACTGGGAAAAAATATACAAAGATTTAAAGAAAAATGG
GAGTCGAGATAATGGATTCAATATTACACTTAGCAAGGAAATCGCACATT
ACGAATATTTTGATGATGAATATAATTCACAGATATTCGAATCATTTTTG
AAAGATTGTAAATCGAAAACGAAAGATGGGTTGGAAGCTTTTAGTATTAC
TTCTGCTATTTGATGTGGTTTTTATGAAAGTTATTATTGATAAAACAAAG
TTAATGAAAACTGAAGATTTTGATAAGACAAATTTTATTGATGTCCGAGA
TTTATATCAGAAGGAATCTGAGCAAATGGAGCGTCCGAGAAAAGACATTA
CTTTGGCATTAAATTTACCATATACAAGGCCTCTTAGTGAATATCCTGTC
AGGTCTGATTTAAACGCTCCGAGATTTTATGCATCCGCAGCTGCAATTGC
TATACAAGATATCAACGCTAATCCTGATTTATTAAGAGGTTATCAGTTAA
AATATTATTGGAACAAAACTATTACAGATACGCACTGTAATGAAGAAACA
GCTGTTAAGAACTTCAAGAAACAGATGACAATGAATTTTGATGGATTTAT
AGGTTATCAGTGTTCATGTACGAAAGTTGGTCGATTGGCAGCTCAAGCAA
ATCTCCCTCTTTTCTCAATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015140XLOC_015140Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026970-exon-sc0000597-1575043694:151392..152056TCONS_00026970-exon-sc0000597-1575043694:151392..152056Clytia hemisphaericaexon
TCONS_00026970-exon-sc0000597-1575043694:150537..150885TCONS_00026970-exon-sc0000597-1575043694:150537..150885Clytia hemisphaericaexon
TCONS_00026970-exon-sc0000597-1575043694:149857..150131TCONS_00026970-exon-sc0000597-1575043694:149857..150131Clytia hemisphaericaexon
TCONS_00026970-exon-sc0000597-1575043694:148633..148761TCONS_00026970-exon-sc0000597-1575043694:148633..148761Clytia hemisphaericaexon
TCONS_00026970-exon-sc0000597-1575043694:147410..147761TCONS_00026970-exon-sc0000597-1575043694:147410..147761Clytia hemisphaericaexon
TCONS_00026970-exon-sc0000597-1510915933:151392..152056TCONS_00026970-exon-sc0000597-1510915933:151392..152056Clytia hemisphaericaexon
TCONS_00026970-exon-sc0000597-1510915933:150537..150885TCONS_00026970-exon-sc0000597-1510915933:150537..150885Clytia hemisphaericaexon
TCONS_00026970-exon-sc0000597-1510915933:149857..150131TCONS_00026970-exon-sc0000597-1510915933:149857..150131Clytia hemisphaericaexon
TCONS_00026970-exon-sc0000597-1510915933:148633..148761TCONS_00026970-exon-sc0000597-1510915933:148633..148761Clytia hemisphaericaexon
TCONS_00026970-exon-sc0000597-1510915933:147410..147761TCONS_00026970-exon-sc0000597-1510915933:147410..147761Clytia hemisphaericaexon
TCONS_00026970-exon-sc0000597-1491911889:151392..152056TCONS_00026970-exon-sc0000597-1491911889:151392..152056Clytia hemisphaericaexon
TCONS_00026970-exon-sc0000597-1491911889:150537..150885TCONS_00026970-exon-sc0000597-1491911889:150537..150885Clytia hemisphaericaexon
TCONS_00026970-exon-sc0000597-1491911889:149857..150131TCONS_00026970-exon-sc0000597-1491911889:149857..150131Clytia hemisphaericaexon
TCONS_00026970-exon-sc0000597-1491911889:148633..148761TCONS_00026970-exon-sc0000597-1491911889:148633..148761Clytia hemisphaericaexon
TCONS_00026970-exon-sc0000597-1491911889:147410..147761TCONS_00026970-exon-sc0000597-1491911889:147410..147761Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026970-proteinTCONS_00026970-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000597supercontigsc0000597:147410..152056 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.022913	0.0444124	0	0	0.337598	0.157842	0.570849	0.588139	0.382577	0.460823	4.01886	2.01638	12.3002	17.0603	0.22291	0.338635	2.28579	5.65656	19.398	45.572	34.8606	35.3787	8.61593	13.5023	32.8744	25.0477	3.03659	3.18121	4.14231	5.03948
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001828ANF_lig-bd_rcpt
IPR028082Peripla_BP_I
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00026970 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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