TCONS_00027042 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027042
Unique NameTCONS_00027042
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1751

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027042 ID=TCONS_00027042|Name=TCONS_00027042|organism=Clytia hemisphaerica|type=transcript|length=1751bp
CCCATTTGGTGTTACGATTCACTTGACAAGTGAATGTACACTACCCGGTT
CAACTCATACATCATTTTAGGGGAGTTTGGGCATCATTCTCTGATATAAG
AATGAGTGGAGGCATGTCAGGCATCGTATCTCGGATGGTGACGTTGCTCT
TATTAGCACTCGCAAGAGAAATCATTCTCCTATACCCTGTTCAAGAAAAT
GTCTTCGAGATTTCGTCCGTATCGGTTAGATCATCATTCTTTCCTTTATA
ATTATGTTATCTGGTTCTTTACAAAATGTAGTCATGAAATGAAGACGAAA
tactttctttcatttctttcatACAATTTTACCTCCCTTTTGTGTTTTTA
GCATTTACACTAACTCATATGGATGAATTTATAGACGAACTGTTACATGA
GGAAAGAAGTTGTGATATCATATTACCAAGGATACAGaaaCGCTACTTAC
TTGAAGATAGTGAACAGCTAGAACCAAGGATCAGTGCTTTAGAAGATGAT
TTAAATGATCTTGAATCAGACGACGAACCTGAAATGAAGGAAGATTCACC
ACGTCGAAGAAGCGTCTCACCTGAAGATAGACGCAGAAGAAGTCGATCGC
CTGACAGGAGGAGGAGATCCCGATCAAGATCTCGTTCAAACTCACCAAAA
CGTCGCAGTAGAAGAAGtCCCAGTCCTTCTCGGCACCGTAGACATCGTAG
TAGAAGTCGTTCTCGATCTCGCTCACCCAGACACAGTCGAAGACATCGGT
CAAGATCTCGATCGCCCAGAAGAAGTCGACGCTGAGATATAAAACAAATT
GAATAACAATATCCTGGGTAATTCAACGTTGAGCGTCACTAATTTCGAAT
ATTATACTATTTGAAACCGTAGAACTTTTTAAATGGATTTTTGAAGAATG
CATTTCATAAACTGTTGTTAAACTTACGTGGGAGGAAAATTTAGCTTGCT
TTTGAGATTATAAAGGAAAGCTGGCGCACACTTGGAAAATAATGAAGACA
ACGCATTGCATGTTGAATTTAAAGCACTTCGAAAATTGTATGTACATAGA
CATGATGCAAAAGTAATCAAAAAGGTTTTCTGCCTAAGGTGCAACGTGTT
ACGAGATAACAGAAAACTGAAAGTAGAAACTTGAAATATTTGCATCTAGA
tcaatggaaatttttttaacgtTTATTAGTTAAAATACAAttcattttga
gaaatttgaggATCGTACCTTATATAAATtcatttacacttttttttccG
TACACACTGTATGTACAAGAACTTTCGTCAAACATGTTTAATAAACATGC
GACAGCAATTGCCAATTAAAACAAAGTGCGGTGTGTGCGTTCGTTATATC
TTGCTCCGTCTCAGCAATAGCAAGAAAAGTCATGCGCATGCCCAAGATGT
TGTGAGCGAGTGATGCCATATTCTTGTGCTTTGGGTCGAGTCAAACATAT
TGCTATTTTCGACTTTCTCGTGTTAAAAAATTACCCCTTAGCGAGATTAT
TTGTTACTATTCTTAGAGAGAATATTCGTTTTAAAGAGAATTTGAACAGA
AACACGTTGTCGAAATAAGTACAGAACcctggggacaaaaattgaagtat
gattttccaccagggacgaTATTTCGGCCAATTTTTCCGGTGGGAAGGGG
TcttagtgggtctgtgagaagggggtataaAGGGGGTGTTTAAAATCGAT
AGATTCCTTCATAACTGTTCAATTATCAGTCATCAAAATTTGTAAGCAGC
T
Run BLAST on NCBI

protein sequence of TCONS_00027042-protein

>TCONS_00027042-protein ID=TCONS_00027042-protein|Name=TCONS_00027042-protein|organism=Clytia hemisphaerica|type=polypeptide|length=138bp
MDEFIDELLHEERSCDIILPRIQKRYLLEDSEQLEPRISALEDDLNDLES
DDEPEMKEDSPRRRSVSPEDRRRRSRSPDRRRRSRSRSRSNSPKRRSRRS
PSPSRHRRHRSRSRSRSRSPRHSRRHRSRSRSPRRSRR
Run BLAST on NCBI

transcript from alignment at sc0000601:133728..138527-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027042 ID=TCONS_00027042|Name=TCONS_00027042|organism=Clytia hemisphaerica|type=transcript|length=4800bp|location=Sequence derived from alignment at sc0000601:133728..138527- (Clytia hemisphaerica)
CCCATTTGGTGTTACGATTCACTTGACAAGTGAATGTACACTACCCGGTT
CAACTCATACATCATTTTAGGGGAGTTTGGGCATCATTCTCTGATATAAG
AATGAGTGGAGGCATGTCAGGCATCGTATCTCGGATGGTGACGTTGCTCT
TATTAGCACTCGCAAGAGAAATCATTCTCCTATACCCTGTTCAAGAAAAT
GTCTTCGAGATTTCGTCCGTATCGGTTAGATCATCATTCTTTCCTTTATA
ATTATGTTATCTGGTTCTTTACAAAATGTAGTCATGAAATGAAGACGAAA
TACTTTCTTTCATTTCTTTCATACAATTTTACCTCCCTTTTGTGTTTTTA
GCATTTACACTAACTCATATGGATGAATTTATAGACGAACTGTTACATGA
GGAAAGAAGTTGTGATATCATATTACCAAGGATACAGGTATACAGTGATC
AGTGTACATTTTATAATGAAAAATTTACCCATCTTTGCTACTTTAGACGT
ACAAACTTTCGTGAGCAGAAAGTTTCGCGATTTTAGGAAATTTTTATCCT
TTTCACAGAAGCAAAATATGTCTTTCAAATTGCTTACTAGAGATTTGCAA
AACCTTGAACGTTCGCAAAAAACTTTTGATAAAGATTTCACCTATTGTTT
TTAGGTTTAGCCCAAACAGCTTTTCTCAAAGGACAGCAATTTCAATGTGA
AACTTTAATCCACTTAAGGCACATTTTTACATTTAGTGTGGTCGTGTTAC
AAAAATACAGGCTGTTTGTAGGAAAAAAATAAGATCTAGCTGAAACTTTC
TCCAGACCTTCTCTATAGGATGCTTATACCTCTGAATTCACGCAGAATAT
GCTATATATGGTCAATTTTAGACCAAAATTTGGCGAAAAGTGGAACTTGC
GCATGAAATATCTCGAGTTAGGTAAGGAAATCGGCTATAACCGTTTAAAA
GTCTTCTATATAGTTTTTCGAGAGCTTTCGNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNTCTGAAAATGAGTTTGAAATTTT
CAAAAAATTTCGCCCTTAGGATTTTGCCTGGGGAAAATAGAAATTGCCCA
AAAAAGGGATGTTCCACCAGTGGGACTTTAGGGGATTTTTTCCTGAGGCA
TAACCATCCTATAGAGAAGCTCTGGAGAAAGTTTCAGCTGGATTTTATTT
TTTTCCCTTAAATTATGCTAGACAACCCCACTAATTGGAAAAACATCGAT
TTTTGTTACTCCACTGAACACAAAAAAAACTTTTACTCAATAAAAACACC
GTTTTTCTTTTTATAGAAACGCTACTTACTTGAAGATAGTGAACAGCTAG
AACCAAGGGTAAGTTTAATTTTAGTTCTTTATCAAGTCAACTTGGTACCC
AAGATAAGGTGCAGTATAAATATACTCAAAACTACTTTTTGAATGTCTCT
GACTGTCAGTTCTAAGTAAACCGGTAGATTTTCTGCATTATAAGACTACT
TAGACTTGCCATAATTATATTTATTAGACTTATTTTCGCGCCTTTTAAGG
GTTTTTCAGTAAAAGCGTTAGTTACCCAAAAATACAACTTTTGCAGATTT
GGAAAAATCCCTAGGATCTCTTTGCCCACGAAAATTTATCTCGTAAAAAT
AGTTACATTAATCGCCAGAAATAGACTTGAGGATTTATAGATGTATTAAT
TATATTCAACATGAAAGTTTTTAAACAGAAGACCTTGCAAATGACTGTTT
TCGTCAAAAAAGAGAGATTGGATGTAGTTCTTCATTCATTAGACTTACTC
CAAAAAACAAGACTTTTGTTATAAAAGTATAAAAACGCACTGTCATGTAT
CTTGTTCTTTAGATCAGTGCTTTAGAAGATGATTTAAATGATCTTGAATC
AGACGACGAACCTGAAATGAAGGTTAACTATTTTCTTCTACACTGTACTT
TTGATTCGTTCACCTTAGAAAAATTGTGTCAAATAATTCCTCTAGTATGC
AATGATATGAATATATAGGAAATGATTGTTCTTCTCTAAATGAAACTGGG
GCTTTCCAAATGAAAACGGGGCTTTTCAAGTATAATATACAATTTGCTTC
TTGGGCTCTTGAAGTTTGCTATTTCCAAAAAGGGATCTGTAGTTCATAAC
CTACTATAAAGTATTTAAGGGGTAAAACAAACTGAAAAAAAGGATTATTT
ATGTCAATGAAAGTTCATATTGTTGTGCACGTTTATAATCGGTAAGTGTT
CTCCTTTGTTCTGCAGGAAGATTCACCACGTCGAAGAAGCGTCTCACCTG
AAGATAGACGCAGAAGAAGTCGATCGCCTGACAGGAGGTAAAAGAGAGTT
TNTCAATTGAAGATAGACGCAGAAGAAGTCGATCCCCTGACAGGAGGTAA
AAGAGAGTTAATTGTCCTTTGTTTATAGTATATGATAAACTCGGGCATCT
CTCACAAACATCACAGGTGAAGGTCATAGATTTATAAAGCCCGAAGGGCT
AGATGGAGTATTTTTGCTGAAAAGTGTGCCTTGGCTAGGTAGGAAATCCT
ACCTAAGTGACGTGACATTACAATAGAATTTCAGCACTTGACCAATAAGA
AGCTTTTGCGGGTTTTCGAAAACAATAGCAACAATATTTTTTTCCGATAT
TCACTTTTTTAGCCTGCGATGGCTTAAAGTCCGATATCTAGCCCTTCGGT
CGGGTGAAGTTATCTTTGCTTGATAATGTAGTTTTGTATGCCGTTTGATT
AACCCATCTTCTTATCTTTTTTGCACTAGGAGGAGATCCCGATCAAGATC
TCGTTCAAACTCACCAAAACGTCGCAGTAGAAGAAGGTACAGTTGATTTT
CNCCCGATCAAGATCGCGTTCAAACTCACCAAAGCGTCGCAGTAGAAGAA
GGTACAGTTAATTCTTTCTACATTAAAGGAAGAAATTTTGGCGGGAATCT
AATTTGGCGGATGACCGAAAAAGTTTTTTTAGAGGGAATTTAATTTGGCA
TTTAACTTGAAAAATTAAATTTGGCGGGGATTCAATTTGGCGGACGAAGG
ACATCTTTGTCCAAAAAACGCCATTAAAAAAAGAAAAACATGTTTTAAAG
CCTGATATAGCACACACATTTGGGGGAATAAATAGAGCAACTTAAATCTG
ATGGGAATTTGATTTGGCCGATGACGGAAAAAATTAGATTTGGCGGGTAC
TTGGATTTTGACCGAATCCGCCAAACTCGCCAAATTTTCTTCCCGCCAAA
ATTTCTTCCTTTAATTAAATGTAATTCAATTTTCAAGGGGAATTGTCGGA
TTTTCTCTATTTTCCCTATGAATCAGCCAGGTTTTTGTATGATGTCATTT
TTTTCTTTTTTAAGATTTACTTATGAAGCGAATTTCCCTCTAATTTCACT
CAAAATACATTCGACTTTCTACTAAGTGTAATTTCGAGAGTATGTTGTGC
TCTTATGCTCTACTGTATCGCGACGATCTGTAGTCGGAATTTATCGGATT
CAAATAATCTGTTATTGTTCTAGAATTTTATTAACAAGCTTAGTTTGTCT
TAATTAAGCCCTTGATGCAAAAATTGCCGTTATATAATATTTAGAAATAT
TTTTTCTTTTTTACAGTCCCAGTCCTTCTCGGCACCGTAGACATCGTAGT
AGAAGTCGTTCTCGATCTCGCTCACCCAGACACAGTCGAAGACATCGGTC
AAGATCTCGATCGCCCAGAAGAAGTCGACGCTGAGATATAAAACAAATTG
AATAACAATATCCTGGGTAATTCAACGTTGAGCGTCACTAATTTCGAATA
TTATACTATTTGAAACCGTAGAACTTTTTAAATGGATTTTTGAAGAATGC
ATTTCATAAACTGTTGTTAAACTTACGTGGGAGGAAAATTTAGCTTGCTT
TTGAGATTATAAAGGAAAGCTGGCGCACACTTGGAAAATAATGAAGACAA
CGCATTGCATGTTGAATTTAAAGCACTTCGAAAATTGTATGTACATAGAC
ATGATGCAAAAGTAATCAAAAAGGTTTTCTGCCTAAGGTGCAACGTGTTA
CGAGATAACAGAAAACTGAAAGTAGAAACTTGAAATATTTGCATCTAGAT
CAATGGAAATTTTTTTAACGTTTATTAGTTAAAATACAATTCATTTTGAG
AAATTTGAGGATCGTACCTTATATAAATTCATTTACACTTTTTTTTCCGT
ACACACTGTATGTACAAGAACTTTCGTCAAACATGTTTAATAAACATGCG
ACAGCAATTGCCAATTAAAACAAAGTGCGGTGTGTGCGTTCGTTATATCT
TGCTCCGTCTCAGCAATAGCAAGAAAAGTCATGCGCATGCCCAAGATGTT
GTGAGCGAGTGATGCCATATTCTTGTGCTTTGGGTCGAGTCAAACATATT
GCTATTTTCGACTTTCTCGTGTTAAAAAATTACCCCTTAGCGAGATTATT
TGTTACTATTCTTAGAGAGAATATTCGTTTTAAAGAGAATTTGAACAGAA
ACACGTTGTCGAAATAAGTACAGAACCCTGGGGACAAAAATTGAAGTATG
ATTTTCCACCAGGGACGATATTTCGGCCAATTTTTCCGGTGGGAAGGGGT
CTTAGTGGGTCTGTGAGAAGGGGGTATAAAGGGGGTGTTTAAAATCGATA
GATTCCTTCATAACTGTTCAATTATCAGTCATCAAAATTTGTAAGCAGCT

Coding sequence (CDS) from alignment at sc0000601:133728..138527-

>TCONS_00027042 ID=TCONS_00027042|Name=TCONS_00027042|organism=Clytia hemisphaerica|type=CDS|length=2502bp|location=Sequence derived from alignment at sc0000601:133728..138527- (Clytia hemisphaerica)
TCCCAGTCCTTCTCGGCACCGTAGACATCGTAGTAGAAGTCGTTCTCGAT
CTCGCTCACCCAGACACAGTCGAAGACATCGGTCAAGATCTCGATCGCCC
AGAAGAAGTCGACGCTGAGAGGAGATCCCGATCAAGATCTCGTTCAAACT
CACCAAAACGTCGCAGTAGAAGAAGGAAGATTCACCACGTCGAAGAAGCG
TCTCACCTGAAGATAGACGCAGAAGAAGTCGATCGCCTGACAGGAGATCA
GTGCTTTAGAAGATGATTTAAATGATCTTGAATCAGACGACGAACCTGAA
ATGAAGAAACGCTACTTACTTGAAGATAGTGAACAGCTAGAACCAAGGAT
GGATGAATTTATAGACGAACTGTTACATGAGGAAAGAAGTTGTGATATCA
TATTACCAAGGATACAGTCCCAGTCCTTCTCGGCACCGTAGACATCGTAG
TAGAAGTCGTTCTCGATCTCGCTCACCCAGACACAGTCGAAGACATCGGT
CAAGATCTCGATCGCCCAGAAGAAGTCGACGCTGAGAGGAGATCCCGATC
AAGATCTCGTTCAAACTCACCAAAACGTCGCAGTAGAAGAAGGAAGATTC
ACCACGTCGAAGAAGCGTCTCACCTGAAGATAGACGCAGAAGAAGTCGAT
CGCCTGACAGGAGATCAGTGCTTTAGAAGATGATTTAAATGATCTTGAAT
CAGACGACGAACCTGAAATGAAGAAACGCTACTTACTTGAAGATAGTGAA
CAGCTAGAACCAAGGATGGATGAATTTATAGACGAACTGTTACATGAGGA
AAGAAGTTGTGATATCATATTACCAAGGATACAGTCCCAGTCCTTCTCGG
CACCGTAGACATCGTAGTAGAAGTCGTTCTCGATCTCGCTCACCCAGACA
CAGTCGAAGACATCGGTCAAGATCTCGATCGCCCAGAAGAAGTCGACGCT
GAGAGGAGATCCCGATCAAGATCTCGTTCAAACTCACCAAAACGTCGCAG
TAGAAGAAGGAAGATTCACCACGTCGAAGAAGCGTCTCACCTGAAGATAG
ACGCAGAAGAAGTCGATCGCCTGACAGGAGATCAGTGCTTTAGAAGATGA
TTTAAATGATCTTGAATCAGACGACGAACCTGAAATGAAGAAACGCTACT
TACTTGAAGATAGTGAACAGCTAGAACCAAGGATGGATGAATTTATAGAC
GAACTGTTACATGAGGAAAGAAGTTGTGATATCATATTACCAAGGATACA
GTCCCAGTCCTTCTCGGCACCGTAGACATCGTAGTAGAAGTCGTTCTCGA
TCTCGCTCACCCAGACACAGTCGAAGACATCGGTCAAGATCTCGATCGCC
CAGAAGAAGTCGACGCTGAGAGGAGATCCCGATCAAGATCTCGTTCAAAC
TCACCAAAACGTCGCAGTAGAAGAAGGAAGATTCACCACGTCGAAGAAGC
GTCTCACCTGAAGATAGACGCAGAAGAAGTCGATCGCCTGACAGGAGATC
AGTGCTTTAGAAGATGATTTAAATGATCTTGAATCAGACGACGAACCTGA
AATGAAGAAACGCTACTTACTTGAAGATAGTGAACAGCTAGAACCAAGGA
TGGATGAATTTATAGACGAACTGTTACATGAGGAAAGAAGTTGTGATATC
ATATTACCAAGGATACAGTCCCAGTCCTTCTCGGCACCGTAGACATCGTA
GTAGAAGTCGTTCTCGATCTCGCTCACCCAGACACAGTCGAAGACATCGG
TCAAGATCTCGATCGCCCAGAAGAAGTCGACGCTGAGAGGAGATCCCGAT
CAAGATCTCGTTCAAACTCACCAAAACGTCGCAGTAGAAGAAGGAAGATT
CACCACGTCGAAGAAGCGTCTCACCTGAAGATAGACGCAGAAGAAGTCGA
TCGCCTGACAGGAGATCAGTGCTTTAGAAGATGATTTAAATGATCTTGAA
TCAGACGACGAACCTGAAATGAAGAAACGCTACTTACTTGAAGATAGTGA
ACAGCTAGAACCAAGGATGGATGAATTTATAGACGAACTGTTACATGAGG
AAAGAAGTTGTGATATCATATTACCAAGGATACAGTCCCAGTCCTTCTCG
GCACCGTAGACATCGTAGTAGAAGTCGTTCTCGATCTCGCTCACCCAGAC
ACAGTCGAAGACATCGGTCAAGATCTCGATCGCCCAGAAGAAGTCGACGC
TGAGAGGAGATCCCGATCAAGATCTCGTTCAAACTCACCAAAACGTCGCA
GTAGAAGAAGGAAGATTCACCACGTCGAAGAAGCGTCTCACCTGAAGATA
GACGCAGAAGAAGTCGATCGCCTGACAGGAGATCAGTGCTTTAGAAGATG
ATTTAAATGATCTTGAATCAGACGACGAACCTGAAATGAAGAAACGCTAC
TTACTTGAAGATAGTGAACAGCTAGAACCAAGGATGGATGAATTTATAGA
CGAACTGTTACATGAGGAAAGAAGTTGTGATATCATATTACCAAGGATAC
AG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015190XLOC_015190Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027042-proteinTCONS_00027042-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027042-exon-sc0000601-1575043694:138091..138527TCONS_00027042-exon-sc0000601-1575043694:138091..138527Clytia hemisphaericaexon
TCONS_00027042-exon-sc0000601-1575043694:137070..137111TCONS_00027042-exon-sc0000601-1575043694:137070..137111Clytia hemisphaericaexon
TCONS_00027042-exon-sc0000601-1575043694:136506..136565TCONS_00027042-exon-sc0000601-1575043694:136506..136565Clytia hemisphaericaexon
TCONS_00027042-exon-sc0000601-1575043694:136091..136161TCONS_00027042-exon-sc0000601-1575043694:136091..136161Clytia hemisphaericaexon
TCONS_00027042-exon-sc0000601-1575043694:135592..135648TCONS_00027042-exon-sc0000601-1575043694:135592..135648Clytia hemisphaericaexon
TCONS_00027042-exon-sc0000601-1575043694:133728..134811TCONS_00027042-exon-sc0000601-1575043694:133728..134811Clytia hemisphaericaexon
TCONS_00027042-exon-sc0000601-1510915933:138091..138527TCONS_00027042-exon-sc0000601-1510915933:138091..138527Clytia hemisphaericaexon
TCONS_00027042-exon-sc0000601-1510915933:137070..137111TCONS_00027042-exon-sc0000601-1510915933:137070..137111Clytia hemisphaericaexon
TCONS_00027042-exon-sc0000601-1510915933:136506..136565TCONS_00027042-exon-sc0000601-1510915933:136506..136565Clytia hemisphaericaexon
TCONS_00027042-exon-sc0000601-1510915933:136091..136161TCONS_00027042-exon-sc0000601-1510915933:136091..136161Clytia hemisphaericaexon
TCONS_00027042-exon-sc0000601-1510915933:135592..135648TCONS_00027042-exon-sc0000601-1510915933:135592..135648Clytia hemisphaericaexon
TCONS_00027042-exon-sc0000601-1510915933:133728..134811TCONS_00027042-exon-sc0000601-1510915933:133728..134811Clytia hemisphaericaexon
TCONS_00027042-exon-sc0000601-1491911889:138091..138527TCONS_00027042-exon-sc0000601-1491911889:138091..138527Clytia hemisphaericaexon
TCONS_00027042-exon-sc0000601-1491911889:137070..137111TCONS_00027042-exon-sc0000601-1491911889:137070..137111Clytia hemisphaericaexon
TCONS_00027042-exon-sc0000601-1491911889:136506..136565TCONS_00027042-exon-sc0000601-1491911889:136506..136565Clytia hemisphaericaexon
TCONS_00027042-exon-sc0000601-1491911889:136091..136161TCONS_00027042-exon-sc0000601-1491911889:136091..136161Clytia hemisphaericaexon
TCONS_00027042-exon-sc0000601-1491911889:135592..135648TCONS_00027042-exon-sc0000601-1491911889:135592..135648Clytia hemisphaericaexon
TCONS_00027042-exon-sc0000601-1491911889:133728..134811TCONS_00027042-exon-sc0000601-1491911889:133728..134811Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000601supercontigsc0000601:133728..138527 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
55.1164	55.2209	56.692	54.168	35.1904	24.9103	27.7755	28.153	19.7592	18.8919	14.8297	12.8851	8.77066	8.84323	10.8195	10.6776	17.7974	16.6114	5.60463	7.36593	11.9705	10.346	28.1628	23.6736	15.0092	17.0417	7.91197	7.17422	17.0552	16.6229
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR024767PRP38_C
IPR005037PRP38
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027042 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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