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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027069 ID=TCONS_00027069|Name=TCONS_00027069|organism=Clytia hemisphaerica|type=transcript|length=493bp
CGAAAATGTAAATgcaaaagaattggaaaaattggccaaaatatcactAA
TAGAatctttcgtttttaaaaagtttcgtttaaaaaataacattttgatg
acatcagcagAAATTACTAAAAGAcggaagattttattttttgcagacgt
aatcagaattttgaaaatatgattcgATCAGcgaaaaacaattaggttac
acatcagGTCCCGCTCGTAAAAATGAATACGGAGACGAAATTCAATAAAC
CAACAATTGATGGATCGATTATGGTTGTAGTGAAGATTACAGAATGTAAA
TGTGTTTTATAAAgataaattgaattttttttggaagatATTTTGTGAGA
TAGAAATAGAATATTTTATTTGAGTAGAACCAAGATAAACGTTATTACTT
TTCATCACCACTTTCACTAAtccgaaaaatttaatttcaaacgCCAAGTT
AATTTTTGAAAGAAGAACTCAAGATGTTCCTCTCAAAAAAAAC Run BLAST on NCBI transcript from alignment at sc0000606:465..2319+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027069 ID=TCONS_00027069|Name=TCONS_00027069|organism=Clytia hemisphaerica|type=transcript|length=1855bp|location=Sequence derived from alignment at sc0000606:465..2319+ (Clytia hemisphaerica)
CGAAAATGTAAATgcaaaagaattggaaaaattggccaaaatatcactAA
TAGAatctttcgtttttaaaaagtttcgtttaaaaaataacattttgatg
acatcagcagAAATTACTAAAAGAcggaagattttattttttgcagacgt
aatcagaattttgaaaatatgattcgATCAGcgaaaaacaattaggttac
acatcaggttagaaactatggcatagtacccttcatgttcagtcatttgt
ttgatCGTTTTCCGTCGACTAATgccatctaaaaattttgatttttttgt
attattttagggcatgccataacttacccgagaggGCCCAAGAGCataac
aaaattcttttgaaagtaCTTACAccatagaggtaataaaagttagatgg
agtaacaacttttccgtaatagccagagaagtcataaaactctttagaaN
Tggctttttcccaaagcaacaaagcaacagtttgctatcaacgatacaat
acaatagaatagtaggagtggtatctccatctatatttttattacctcca
tgcttACACGTTTTAAAGAAAACGGACTCGCTACACgttatttttaagaa
acacacttttaagaaacatgaggctcagaatgcctaaaaactaagaacat
tttgctgaggctgagaatgagaaaacaGCATTATTTAATTCCGTTTTTTA
AGAgccttcgaaaaaaaacaaatgttttttttctttgcatgaaaaatagg
ctgattatgtcaaaaagtttagaaacatttaaggctcaaaaggccgattt
cttaagaaacattagcgaggttaagcaagtgtttatttagaccgttcaat
gggccattccattttatgtcAATACATAGGggtggacgaacttttccagg
gggtattttgattaaaatttccagggtgTATTTGAAAAACTTCCAGGGGT
TCCTGTAAAATTGAGACTATTTTCCGGGGGGTTAGACAAGTAAGCATCGT
CCtccagatatttgattttccagGGGTCAAGTCGAAGTTACAAAATTTTC
gagggtttaaaaaaaatttatgaccAATTTCCAGAGGGCTAAATGATAAT
AtgaatttttccagggggttaatACCAAATTTTACTTCCTCCACCCTACC
ACCAGAACCATgggaaaaatttccaggggatggTGGAAGAATTTTTTCCA
GGgcctttttcagattttaccatttttccagggggtatagacacattttc
agagaaaaaaatttaccctAAAAAGGTTCATCCACACCCCTGTATGGTTT
GTTtttggaatggcccaatgtttgaaacataatatttgaaaataatattg
caAATATTGCAAATGCCGTCCGAATGCATCTAAAAATCATTAATAAAAAC
CtcatatattatatatttgaGAAATATTTCCAACTCATGAAACTTtaaat
ttggaaagaaatattgcaaatatactGTGCTTTAAAAATTATCTGACAAT
CTTTAAGacattatattttgaaaaattctaatATAATTATTTTACATTGT
TTATATATTTGCTCTTCAGGTCCCGCTCGTAAAAATGAATACGGAGACGA
AATTCAATAAACCAACAATTGATGGATCGATTATGGTTGTAGTGAAGATT
ACAGAATGTAAATGTGTTTTATAAAgataaattgaattttttttggaaga
tATTTTGTGAGATAGAAATAGAATATTTTATTTGAGTAGAACCAAGATAA
ACGTTATTACTTTTCATCACCACTTTCACTAAtccgaaaaatttaatttc
aaacgCCAAGTTAATTTTTGAAAGAAGAACTCAAGATGTTCCTCTCAAAA
AAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027069-exon-sc0000606-1491911889:465..671 | TCONS_00027069-exon-sc0000606-1491911889:465..671 | Clytia hemisphaerica | exon |
| TCONS_00027069-exon-sc0000606-1510915933:465..671 | TCONS_00027069-exon-sc0000606-1510915933:465..671 | Clytia hemisphaerica | exon |
| TCONS_00027069-exon-sc0000606-1575043694:465..671 | TCONS_00027069-exon-sc0000606-1575043694:465..671 | Clytia hemisphaerica | exon |
| TCONS_00027069-exon-sc0000606-1491911889:2034..2319 | TCONS_00027069-exon-sc0000606-1491911889:2034..2319 | Clytia hemisphaerica | exon |
| TCONS_00027069-exon-sc0000606-1510915933:2034..2319 | TCONS_00027069-exon-sc0000606-1510915933:2034..2319 | Clytia hemisphaerica | exon |
| TCONS_00027069-exon-sc0000606-1575043694:2034..2319 | TCONS_00027069-exon-sc0000606-1575043694:2034..2319 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000606 | supercontig | sc0000606:465..2319 + |
Blast
The following BLAST results are available for this feature:
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