TCONS_00027296 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027296
Unique NameTCONS_00027296
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3740

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027296 ID=TCONS_00027296|Name=TCONS_00027296|organism=Clytia hemisphaerica|type=transcript|length=3740bp
aaGATGTGAATATTGCAAAACATACACAGGCTAAAAATCAGGCCAAAGAA
CAAAGGTCAACTTCAACATGGTTTGAATGCTTTGGTTGTTGCTGAAAACG
ATAGAAGCCAGAAAAAAGCTgtaaagaagagaaaaacaaacttttctgTA
GTGTTTGTTAATTATGTTTACAAGTTTGTTCTATTTGTTAAACATAAGAT
GAATCAACAACAAAAGCTTATTATTCTTGCTGGTGGGTctgctttcattt
tcattcttgGTTTGGcatattttttgtcaaagaaaGATGAGGAGTTTGAA
GATGATGACGAAGAGGATGAAATTCTTGATGACAGCAGcgaaaaggaaaa
caaaaccaAGTCAACCCGAAGTGAACTACCAGATTTAAATGCTGCAGTTG
CAAGTGCTGCTCAGTTTTCGGTTGACATTGATGTTCCAAAAAGAATTGTT
GGAAGTATTATTGGAAAAGGAGGTTCAAACATCAAACAGTTGAGAAATGA
ATTTGCAGTCAGaCTTAACTTTGAGAAGGAAGATGAGTtaactgaagaag
aaaaagaaagcaaacCAGTTCGAAAACTGACAATAAAGGGGGAAAGAGAA
AAGGTTTTAGAATGTGAACAGAAGGTGAAGAAAATAATTTCAGACACTCC
AGAGTTTATTACTGCTGAAGTTTTTGTACCTCAAGAAGCATGTGGCCAAA
TTATCGGAAAAAGTGGACAGAGTATCAGGGAGATGTGCAGTATATCAGGA
GCTAAAATCAATTTGGAGAGAGATGTAGACCCCACTTTGAATGGTCTTCG
CAGAGTGGAAATTTCTGGTGCATCTACACAAGTGGATTATGCAAAACTTC
TTATTGAGGAGAAAGTTGAAGTTGCTAAGAAACTCAAAGCAAAAGATGAA
TTGAGGGTTTTATCTTCCAAACAAGTTGCTGATGCAAAACCTGAAAATGT
AGCAGAGAATTTACCACAGACCTACAAATGTATGCCTTTCCCTGAGCCTG
ACGAAAATGGTTACTTCAAAGTATTTGTATCTGCCTATGATACACCAGAC
CGTGTGTGGATTCAACCTTGTACTACAGAAAGCTTGAAGCTGGAAGCACT
CAATGAGAAACTGAAACTTGTTTATGGTAACATGTCAAAAAACCAAGGGC
AGCTAATGCAAGGAAAGAAAGGTGAACTGTGCGTGGCACAACATAAAGAT
GGGGAATGGTATCGAGCAACCATTGTATCCATCAATAGAGATCGAACTGC
TGAAGTTCTTTTCATCGATTATGGAAACGTTATCCTAGTCAACCTTGACG
ATGTCAAGGCTATCAAACCAGAATACAAGGAACTTCCAGCTTGTGCTTCA
GAATGCTACTTGCCCATTCGTCCGAAAGGAAACCCATACTGGACACAAGT
ATCAGAAACCCACTTCAAGAAACTGATACACTACGGTGGCTGGATAGCAA
TGTACGCCAACGTGCTTGGGGAGAAAGATATAAATGGAAAGAAACTTAAT
GTTATCGAAGTTATACATCTTGAACAAGAAgagGATATTTGTGATCACAT
GGTACAAAGCAACCACGCTGAATATGATGATGAGTTTAAAACGACAAAGA
GCAAGTTTGCACAACAACAAAAACCTTCGGCAGATGTCGTGACACCTGAA
ATCCTTGAAATCCCTGAAATTCCCATTCTCGAAGACGTCATCCAGCCAGA
ATCTATCCATGttgttgaagaagaaaatgttaTCCCTTCAACTGAAGATG
CAATTGAATCTTCAATCGAAATTATCGAAGAAATTATTCCACTGGATGTT
GAAAGTAATGTTGAATCTGCTCCTGAAATCGTTGAACCTGTAACTCGAAA
TTCTGAAGAAGTGTCAGCGGAGAGAAACAACGTTGAGGAAGCAGAGGGAA
CGTTGTTATCTTCAAAGTTGGATGACACGTTAGCATCCTCAGACACACTA
GAATCAACTGATAGTGGTATTACTAAGGATTTGAAATCATCAGATTCTCA
AGACCCACAAATCACCACAGCTGAACGTTCAATGCCAGACTTAGAGAATG
TCGGTAAACAAGCATCTGTTGATGATTCATTTGTGGACATTGATATGATG
TCTGTTGATGGAGCTGTCAAGGCTGTTGTCAGTGACCACATTCCGCCAGT
GACTCCTCAAAAGGTCGGAGATTCCAATGTTGATGAGAGTACCCTAGAAA
CGCCAGTATCCACTAATGTTGAAACTGCACAAGCCACCAGTATTTTAGAG
GACGAAGTTGACAAAAAAGGACAATCTGATAACAATGAAGACGTTGTACA
ATCTGCAATTGACTCTACCGATGACCGTATTGAAGTTGATGTTCCGgtta
agaaagaagaagaaacattagttgaagaaaatttaccgGTGGccgaagat
gaagatgaagatgaagatgaagacgaAGAACACGCAGAATTACAACGATC
TTTAGACGAAACGAGCAAGAAGAATGTCTTTATAAATTCATCGATGGAAA
TGGCACGAGAGAATCTCATCCTTCTCGATAATGGTGATTCGTCGACCGAT
AACGACTCCTTCTACAGCGCACGATCAGACGTCACGTTAACCGATACCGA
TAATTTGAGCTTCATGACGGCCACTGATCGTATGACCCCTTCCAACGAAA
TTTCTTTTAGTATTCCCGATTTAACCAATAGTAGCCCGTATGGGTCACAA
ACAGACTTGACTAAAAGTAGATCTAAAAGTGACTTATCGACCAAAAGTAA
ATCTAGGAACAGTTTGGGTGGGTCAAAATTTGAGATTCAATTTATTGATG
AAAAGACACATAAAGTGATGTCGAGAGAGTCTCTGACTGCTTCTTTTGAA
GCCTCTGGTAGTCATATGAGTAAACAACAGAAACGATTATCAGCTCCAAG
ATCTCCTGGTAAAGAAACCCCAGTATGATGAGTGTTAGGTTTGTGGTAGA
CCATTACCATGCAATATTAAGAATGTGGTAAATTGTTTACAATCCAATTT
TAGGAGTGAATTTTTAAAAGCAAACTTATATACCAATTTTAAACTTCTTT
TATAACAGACAACTAGCGAGCGATCTTATATGAGATAATATTTTGTGTTT
ATAATAGCACCATGATTTTGAAGTATCTAATACTAATGTTGATTTGTAGT
GTTTCTTAAATTTAACCTTCAAGTACTGGACTCGGGTAAAGCTTCTGTCA
TTACAATAATTGTCTGAAAACTCTCTCTAAATTTTCACTTTACTTTTTTG
GCTCTATTCCAAAATTTTGGTCCCGACAAACTCGATTGTAGTACCTCTTG
GTTCTAGATCATAATGTTTacgtagatttaaaaaaatactttttcttaTT
TCGTTCTTATGCAAATTATCTACTTTTGGTTCTTTTTATTGCAGTCTGTA
AAATTCATTTAATCATAGATCCATTATTCAAGTGCCAAATTTCTAAGAAA
CTTTGTTCATATCGTGAATGGTGTACTATAGACGCTGATTTTCAACTGCA
ATTACATTTCCGAGAAATATCTAAGTAAAGCAgatgatatattttttatt
ctcaTTAAAAGTTCATGAATTAATGTTTTCTTATTCAGCGTATATTTATT
CTTCAATTCTTATACTTACTCAATATCAAGaaaatattgttttattttta
cccTAAAATCCTATGTAGGTCCTTCcttcttaacctttttttctttttgg
aaaatttaaagagcccttctatttttaaaaaactgggaAG
Run BLAST on NCBI

transcript from alignment at sc0000613:26366..42597-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027296 ID=TCONS_00027296|Name=TCONS_00027296|organism=Clytia hemisphaerica|type=transcript|length=16232bp|location=Sequence derived from alignment at sc0000613:26366..42597- (Clytia hemisphaerica)
AAGATGTGAATATTGCAAAACATACACAGGCTAAAAATCAGGCCAAAGAA
CAAAGGTCAACTTCAACATGGTTTGAATGCTTTGGTTGTTGCTGAAAACG
ATAGAAGCCAGAAAAAAGCTGTAAAGAAGAGAAAAACAAACTTTTCTGTA
GTGTTTGTTAATTATGTTTACAAGTTTGTTCTATTTGTTAAACATAAGAT
GAATCAACAACAAAAGCTTATTATTCTTGCTGGTGGGTCTGCTTTCATTT
TCATTCTTGGTTTGGCATATTTTTTGTCAAAGAAAGATGAGGAGTTTGAA
GATGATGACGAAGAGGATGAAATTCTTGATGACAGCAGCGAAAAGGAAAA
CAAAACCAAGTCAACCCGAAGTGAACTACCAGATTTAAATGCTGCAGTTG
CAAGTGCTGCTCAGTTTTCGGTTGACATTGATGTTCCAAAAAGAATTGTT
GGAAGTATTATTGGAAAAGGAGGTTCAAACATCAAACAGTTGAGAAATGA
ATTTGCAGTCAGGTAAAAAATTCTTAACATTCACTTATAANNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGCTGTAAAG
AAGAGAAAAACAAACTTTTCTGTAGTGTTTGTTAATTATGTTTACAAGTT
TGTTCTATTTGTTAAACATAAGATGAATCAACAACAAAAGCTTATTATTC
TTGCTGGTGGGTCTGCTTTCATTTTCATTCTTGGTTTGGCATATTTTTTG
TCAAAGAAAGATGAGGAGTTTGAAGATGATGACGAAGAAGAGGATGAAAT
TCTTGATGACAGCAGCGAAAAGGAAAACAAAACCAAGTCAACCCGAAGTG
AACTACCAGATTTAAATGCTGCAGTTGCAAGTGCTGCTCAGTTTTCGGTT
GACATTGATGTTCCAAAAAGAATTGTTGGAAGTATTATTGGAAAAGGAGG
TTCAAACATCAAACAGTTGAGAAATGAATTTGCAGTCAGGTAAAAAATTC
TTAACATTCACTTATAAGTCTGAAAATAAACTTTTATTCACATAGCCAGA
CATATACCGTGAGATCAGGTAACTTGCATCCAGTGGAGGCTAACATGCAT
ACCCCTCACAAATCCAGACGGTACTATTTAATCGATAAAATTCGATTATC
GAAGTAAGGCGGCCATCAAAAAATTGTTCTATTCGCGTCACCCGCCCGCA
TCATATTTTCCCCTGATTTTCTGGTGCGGAGATGCGGGAAAAAATCCGGA
AAAAGCAGTTAGTGTAAAACACAGGTCACAGGTCACAGGTCACGGGTCAC
GGGTCACAGGTCAGCTTTAATTACTGTAAAACACAAAGAAAATGTTGTTA
ATGTCAAAAATATAATTCCAAAGGTACTTTATTGATCTAGAACTGTATTA
TATATTACATCTATATCACACATGTAAAAAAATTATCTTTTCAATGTTAT
ACGCATGTTATGTAAGTTATATACAAAGGATAAAGAAATATTCGAATATC
GATCACACCTTTGCTTTAAACAGCCCCTAACAGGAAAATAGCTATTTCAC
AATCACTATGCATAGTTCGGACCCCCCCTTTCTTAAGGGGGGNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAAAAATGCCATT
TTTACTCATTTTTCGCTTTAGTGCGAATCAAAGACCCCCCTGGGGAATGC
TGGATTTTTTACCTAGGAGGTTAAAATTTGCGCAAAATGTCTAACAATAG
ATTAAATTTCACAAAAAAATACTACACTTTGAATTTTTTGACTTTGCCAT
TTGACGATCTACCCTACTTTAAGATAACATCATTATTGACATAATTTAAG
TGTCATTTGTTGTCAATAATTGAGGTTGATGATTTGTCTTTAAGTCTTCT
AAATAACATATTTTGATATTACATTTCCATTACAGATAATATTTTCAGGA
ACTTATGTTATGAGTTGTGTGTTACGAGTGTGTTACAGTTTTCCGATCTG
TAATTTGTATGACCTGTGACCTGTGACCTGTGTTTTACACTAACTGCGGA
AAAAGCCCGGAAAAAGCAAATTGTTCTTTTGACGTATAGCTTTTTTCTTG
ATTGCTCTGGCGGCCATCAGAAAATTGTTCTGTTCGTGTCACCACCTGCC
CCCGACTTACAGAAGCGATTTTAAAAAACCCGGGAATTTTTCCGACCACC
CGTCCGCCAGCGTGCATTTTTAACACCTGTTGCGACGCGAACAGAACAAT
TTTTCGATGGCCGCCTAATCGATAATGATCAAAGTAATCAAACAACCACT
TACCGTGAAGTCGGGTAACTTGCATCAGTGGAGGCTAACATGCATAGCCC
TCAAATGAATGACCTGTCTGGTCCTTAAAATACAAAGTTAAATCAAAACA
AAAATGGTAGAGTAGAGCGGCAACCGGAGCTACGTAGTTCATTTGTTTTG
AAATTTTGCTGCTCTGATTTGTCAGTCATTTGAGGGCTATGCATGTTAGC
CTCCACTGATGCAAGTTACCCGACTTCACGGTATCGATTAATAATTGAAT
GTCGAGTACCAAAATTTCAAAAAAATTGTGAGTATTCGATCACTTTCTTA
ACCCTTCGAAGACTCAATAACCGTTCGAGTACTTTGATTGTTATTGATTA
CTTTCGATAACTTTGACAACTTCAATAACCAATTGATTACTTCGATAACC
AATCACTATGATATATTTTTAAGAAAAACAAAAAAAACTGACCTAAAACC
AAAGCACAAAAAGAAACCCCGCCATAAAGATTGACCCCCTTATTTCCCAG
CCATTTTCCCCTCCATTTTGTGTGCCTTCGCCTTGGGTTTCCTCAAGTAA
CTCAAATCACGCATTCTGATCGGTCGAAGAAAACGAAAGTGGTTTTCGTG
GCGTGAATCGGTGTTTTTATTGGCCTAAAAAAACTTGGTTTCAGATTATT
TTGACGTGCTTCTATTGGAAACATATTTGATAAAATCGAAGGCTGGAAAG
TACTCAATACAATCGAAGGTATTCAATATGATCGAAGGTAATCAAAAAGT
AATCGAAATGATTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCAAAATACATAATCATT
CAAAAATACATACTAACTTTTTAAAATACATACTTATCTTCCAGATACAA
ATACTATATTCAAATATTCAAATATTCAAACTATCTTTTCAAAATACATA
TATACAACCTTTCAAATATAAACGCTATCTTCAATCATTTTTTANCTGGT
CATTAAAATACAAAGTTAAATCAAAACAAAATGGAGCACCCTCCCGGCAC
TCCGGAAACTTCCGGAGTTTTCCGAAGCAGCTAAAAAAACACTATTTTTC
TCTCTCTTCCGGAGCTCTTCCGGTGCTTCTCTGGAGCAAGTGATTTTTAA
CATGTTCTAAAAACTATTTAAACATGGTTATATACAAAAAATAAAATATT
TGTCCCCAGGTGATGGACTTTGGTCAAATAAAATACTTTACAGTCTTTGA
GGATGATGGTTTATGGCGCGCCTGAGCGGACAAAAATACTATCTTTCAAA
AAATACATACTATCTTCCAAAAATACATACTATCTTCCAAAAATACATAT
TATCTTCCAAAAATACATACTATCTTCCAAATATAGATACTTACTCAAAA
ATACATACTATCCTTTCAAAATACATAATCATTCAAAAATACATACTAAC
TTTTTAAAATACATACTTATCTTCCAGATACAAATACTATATTCAAATAT
TCAAATATTCAAACTATCTTTTCAAAATACATATATACAACCTTTCAAAT
ATAAACGCTATCTTCAATCATTTTTTATTAAGGGCCTATCTACACCATGA
TTTTATCAATAAGGTACTGTAGGTCATACGATCTAACTAGCTAGCACATG
CGTACTCCTAGTCTCTTATCAGTGACTAGTGTAATGGGAACAGTGCAAGT
GTGATAATTGTGGGTGTAGCTGGGTGTAGTGTTTGACTCCAACGAGTGGT
CGATTGCTGGATCGTGGTATATGCTTTGCCAAATCACGGTTTATTGATAA
TTTCGAAGTTGAATATACCAACCAACAAATTCCTGAGCCTGAGACTTTTC
TTGTTTGAGACTAGATTTTTCTTAAGNAACGAGTGGTCGATTGCTGGATC
GTGGTATATGATTTGCCAAATCACGGTTTATTGATAATTTCGAAGTTGAA
TATACCAACCAACAAATTCCTGAGCCTGAGACTTTTCTTGTTTGAAACTA
GATTTTTCTTAAGTTTCCACGTGTCTACAAGGTGTGCATGCTCCAATAAG
AAAGTGAGCTTGATCGTACGAGGTCAAGTACTCATCCTCACCTTTATCAT
GTAGATGGGCCCTTAATGAAAAATATACATACCGCTAGGGTATTTTGAAG
ATCACACATATTTTTTTAAAAGATAGTATGTATTTTTTGACGTTAGTATG
TATTTTTAGAGGTAAGTATATATTTTTGAAAGTTAGTATGTATTCTTGAA
TGATAGTGTACAAATTTGAAAGATAGTATGTATTTTTGAATGATAGTATC
TATATTTGAAAGATAGTATGTATTTTTGGAAGAAAGTATGTATTTTTGAA
AGATAGTATTTTTGTCCGCTCAGGCATGTCATAATGGTTCAGCCATTAAT
GAAATTGAGTTTGTCACATTATATTTGAAAGCATCACTGGTCAAAATATC
GAAACTACCATGAGTCGGCTGATTTTTTAAAATATGCGTGTGGGCAGTTA
GTTTTCACATGATAAGCACATATCGTAATTATATCACAGATATCATGCTC
CAGAACACCGGAATTGCACAGAAAAAACGACGCTTTTTGCTCCGAACGTT
CCCGGAGTGCTGGGAGGGTCTTCAAAATGGTAGAGTAGAGTGTCAATCAT
TTAAGATTATTGAATTGTCTTATTTTTGTTCTTTTTCAGACTTAACTTTG
AGAAGGAAGATGAGTTAACTGAAGAAGAAAAAGAAAGCAAACCAGTTCGA
AAACTGACAATAAAGGGGGAAAGAGAAAAGGTTTGTTATTTGTTGAAGGA
AAAATGCTTTGCAGTTGAAGGGTTTTAGTAAAATTATCATTTTTAGAATC
ATAAAATAGCTTACCCTGTCATTTTACCTTAACAAAAAATGAAACTTTGT
CAGGGCATATTTATCATGAAAAGCATTTGAAAAATTCAAGTTAAAGTTGT
CAACAATGATTCTATCTCAAAATATTGACGTCCAAAGTTCCAAATTCAAG
ACATCTGCACTCTTTGGAAGCCATATAAAAATGAGGAAATTGGAAAACTT
CTGTTCATACCAGCTAAAATAATTGAGAGCAGGCTATGTAAGGATACCTG
TAATAATTTTGGTCACATGATATTTAGAGAATTTATATACCATAAAAAGT
CATTTAATTTTTGATCCAGTTCTCTAATCTTTACCTATTATGGATAGAAC
TTTGGATGTAAATATCTTTGGATAGAATCACTGCTGACAACTTTGATTTG
AGTTTTTTAAATGCCTTCCATGATAGCTATTCATGGATTAAGTTTCATTT
TTTATGTAGGAATCTCTTTAAATTATTTCTTACCATAATTATGATAATGT
GAAATTTAAGATTTTGCAGAATTTTGTGTGTTAGTGATGTAGCACAATAA
ATTCTCTTTTAGGTTTTAGAATGTGAACAGAAGGTGAAGAAAATAATTTC
AGACACTCCAGAGTTTATTACTGCTGAAGTTTTTGTACCTCAAGAAGCAT
GTGGCCAAATTATCGGAAAAAGTGGACAGAGTATCAGGGAGATGTGCAGT
ATATCAGGTTGGTATGGAAAACAAAAGTCAAAATTTATATTATATAGTTT
ACCATTTAGGATTAATTGTATTATCCCAATCAACAACTTTACAAAACCAT
TATTTACCTGTATCTACCTGAATTATGAATTGAGTTTCTGCTGAAAGTCA
ATACAATGTAGTAGTCTTTGGTTTTGATATTAATTTTTGTCTAGAATCAG
AACTGACGTCATTCATTAATGAAATTTTATCTTTCATTTCAGGAGCTAAA
ATCAATTTGGAGAGAGATGTAGACCCCACTTTGAATGGTCTTCGCAGAGT
GGAAATTTCTGGTGCATCTACACAAGTGGATTATGCAAAACTTCTTATTG
AGGAGAAAGTTGAAGTTGCTAAGAAACTCAAAGCAAAAGATGAATTGAGG
GGTTTGTTATGAAATATTTTTAGCCACCGCAGCATGACGGTTGAACATAC
AGCTAGTATGCACAAGCTTGTGGGTCTAACCCCACAGCCGGGTAATACTA
AAGGTGGTTGTGCTCAGGATCAAGAGTAAGTGGGAAAAACCAGGGGAAAG
GAGAGGTTACCCCCCCCCCTACCTCTTGGTAGACAGCTAAGGAAATAAGA
TTCAGTGGATTGCCTTTACCTGCAATCACAAAGAAGTTACTTATTAATTA
TTTTATTCCAAATTATTTCAAATGCAACATTGTACTTAAAAAATAGTAAC
TTTTTGGACCTACCTCCGGGTGCCCCGGTGGAGGTCCTATAAATTAACCC
ATGTCCGTTCGTCCGTCCGTCCGTTCGTCCGTCCGTCTGTTACCAGCTTT
TCTCAGGATTGGCTCATTAGTTTTTTCTGATTTTTTGTACAAAGATGGAG
GGCAAGATTCTCTAAAGACTGGCTGAAGTGGTTTTTCCCGGAAAATTCTT
TTTCGCCTTAAAAAACGGATTTTCGTATTTTGGGGAAATTCCCTTTAACC
AAATAAGAAAATATAGCTTTTCTCAAAGTTGACTCATTAATTTTTTCTGA
TCATTTGCACAATGATGCAAAATGGTAATGCCTAAAATGTGACGGAGCCA
GATTTTCGAAAAAATATATATTTGGGCAAATTTTGGCCAAAAACTGCCTA
AAATAGGGTTTTTTGGACTTTGTGCAAAATCCTGTTATTACTTTTTTCAG
ATTTTTTGTACAAAGATGGAGGGCAAGATTCTCTAAAGAATGACTGAAGT
GGTTTTTCCCGGGAAATTCTTATTCGCCTTAAAAGACNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATAGCTTTTCTCAATGTTG
ACTCATAATTTTTTTCTGATTTTTTGCACAATGATGCAAAATGGCAATGC
CCAAAATGTGACGAAGCCAGATTTTTAAGGATAATTATTTTGGGCAAATT
TGGGCAAAAAACAGCTTAAAAGGTTTTTTGGGCCTGAATGGTTCAAGTGA
TTTTCGTATTTGGGGAAATTCCTTTTTACCATTTTACATTATACAACACG
AAAGCTTTATTTTTCCATTCTGAATTTTTGTACAATTATTGTCACTTTTT
TCTTATTTTCATCTGATGTTAATCATTAGGTAGGTCCACTCAGCATGTTG
CTTGTTCTGTCCTGTATTGCTAAATTTTGGCAAAGTTTCATGCAGAGTGT
TTAAGAATGTTTCTATTTGTTTTCAGTTTTATCTTCCAAACAAGTTGCTG
ATGCAAAACCTGAAAATGTAGCAGAGAATTTACCACAGACCTACAAATGT
ATGCCTTTCCCTGAGCCTGACGAAAATGGTTACTTCAAAGTATTTGTATC
TGCCTATGATACACCAGACCGTGTGTGGATTCAACCTTGTACTACAGAAA
GCTTGAAGCTGGAAGCACTCAATGAGAAACTGAAACTTGTTTATGGTAAC
ATGTCAAAAAACCAAGGGCAGCTAATGCAAGGTATCAACAATTAAACCTC
ATGTAAACTCGCTATCCAGTATTAGATCATCTGATCCAGTTAACGCTCGT
TTTCCTTCGATCAGACTTGGTTCACTCATGTTTTGCTCAAGCTACAGATA
TCTAAACAGACTGGTTTTCTGCTATATTTTCATCTTCTCCTCTGCTTGCG
TATTTTACTAGGAAAGAAAGGTGAACTGTGCGTGGCACAACATAAAGATG
GGGAATGGTATCGAGCAACCATTGTATCCATCAATAGAGATCGAACTGCT
GAAGTTCTTTTCATCGATTATGGAAACGTTATCCTAGTCAACCTTGACGA
TGTCAAGGCTATCAAGTAATACTTTGTCTCTTGTCAGAGTAACAGTCATC
TTATATTGTTTATTGTCATTAAATTGACTGCCTTTTTCTTCTTTATCGTA
TTATTTCCTTTGAATTCTAGTGATTATTTTTATACCAGACTGCAAGATGT
GGCAACTTTTTTGGAGTAAGTCTACAAACTGCTACAAATATTAATTTTGA
ATAATAACTTTTTCTTACTAGACCAGAATACAAGGAACTTCCAGCTTGTG
CTTCAGAATGCTACTTGCCCATTCGTCCGAAAGGTAAAGTGAGTTTGCAT
TATTGCAAATTGGATACCCATTTGATATCACCAAAAATCGTTTTCAATTT
TTTCCTAATTTCAATTTCAAGGGTAAAGTTCTCCTGAAAGTCACTAAAAG
AACTTTTTACCTTTTTTCAGGAAACCCATACTGGACACAAGTATCAGAAA
CCCACTTCAAGAAACTGATACACTACGGTGGCTGGATAGCAATGTACGCC
AACGTGCTTGGGGAGAAAGATATAAATGGAAAGAAACTTAATGTTATCGA
AGTTATACATCTTGAACAAGAAGTATGTAGAAATTAGATTTTGGAAAGTT
TTTCTCAATATTAGTGACGGTGATTTTTTCCTTGTCTGCGTTCTCAGCTC
TGTGTCATCATGTTGACGACCTGTCATTGCTATTGAGGTCTTTGCTGATC
CATCATGTTTATCCTCTTTCCTGGAATCTGAATTATAACAAATTTGTTTC
AATGACCAATATTTTATCGTAAGTACCTCATTGATTGAGAGATTTTCTTT
TTCTTTTTCATTTTTAGGAGGATATTTGTGATCACATGGTACAAAGCAAC
CACGCTGAATATGATGATGGTAGGTTGATTTTCAAATTATGATTCATTTG
TATTGAAATAGAAAACTTAGTATTGGAGATCAGGTCTTTATTTTTTAAAT
TCAGGATGCTTTTATCTTGCTTTACCAAGCCGGCCTCTGATTTATTGAGA
CTTTGGGCTAATGCCTTTGAAGACTTGAAAGTCAGTTTGAGGAAAGATCT
CCTAGAACCGTTTACCTTCTTTTTACTATGCGAACTATTCAGATGGTATC
AAACTGTTTTCCTCTTTCTTCCAGAGTTTAAAACGACAAAGAGCAAGTTT
GCACAACAACAAAAACCTTCGGCAGATGTCGTGACACCTGAAATCCTTGA
AATCCCTGAAATTCCCATTCTCGAAGACGTCATCCAGCCAGAATCTATCC
ATGTTGTTGAAGAAGAAAATGTTATCCCTTCAACTGAAGATGCAATTGAA
TCTTCAATCGAAATTATCGAAGAAATTATTCCACTGGATGTTGAAAGTAA
TGTTGAATCTGCTCCTGAAATCGTTGAACCTGTAACTCGAAATTCTGAAG
AAGTGTCAGCGGAGAGAAACAACGTTGAGGAAGCAGAGGGAACGTTGTTA
TCTTCAAAGTTGGATGACACGTTAGCATCCTCAGACACACTAGAATCAAC
TGATAGTGGTATTACTAAGGATTTGAAATCATCAGATTCTCAAGACCCAC
AAATCACCACAGCTGAACGTTCAATGCCAGACTTAGAGAATGTCGGTAAA
CAAGCATCTGTTGATGATTCATTTGTGGACATTGATATGATGTCTGTTGA
TGGAGCTGTCAAGGCTGTTGTCAGTGACCACATTCCGCCAGTGACTCCTC
AAAAGGTCGGAGATTCCAATGTTGATGAGAGTACCCTAGAAACGCCAGTA
TCCACTAATGTTGAAACTGCACAAGCCACCAGTATTTTAGAGGACGAAGT
TGACAAAAAAGGACAATCTGATAACAATGAAGACGTTGTACAATCTGCAA
TTGACTCTACCGATGACCGTATTGAAGTTGATGTTCCGGTTAAGAAAGAA
GAAGAAACATTAGTTGAAGAAAATTTACCGGTGGCCGAAGATGAAGATGA
AGATGAAGATGAAGACGAAGAACACGCAGAATTACAACGATCTTTAGACG
AAACGAGCAAGAAGAATGTCTTTATAAATTCATCGATGGAAATGGCACGA
GAGAATCTCATCCTTCTCGATAATGGTGATTCGTCGACCGATAACGACTC
CTTCTACAGCGCACGATCAGACGTCACGTTAACCGATACCGATAATTTGA
GCTTCATGACGGCCACTGATCGTATGACCCCTTCCAACGAAATTTCTTTT
AGTATTCCCGATTTAACCAATAGTAGCCCGTATGGGTCACAAACAGACTT
GACTAAAAGTAGATCTAAAAGTGACTTATCGACCAAAAGTAAATCTAGGA
ACAGTTTGGGTGGGTCAAAATTTGAGATTCAATTTATTGATGAAAAGACA
CATAAAGTGATGTCGAGAGAGTCTCTGACTGCTTCTTTTGAAGCCTCTGG
TAGTCATATGAGTAAACAACAGAAACGATTATCAGCTCCAAGATCTCCTG
GTAAAGAAACCCCAGTATGATGAGTGTTAGGTTTGTGGTAGACCATTACC
ATGCAATATTAAGAATGTGGTAAATTGTTTACAATCCAATTTTAGGAGTG
AATTTTTAAAAGCAAACTTATATACCAATTTTAAACTTCTTTTATAACAG
ACAACTAGCGAGCGATCTTATATGAGATAATATTTTGTGTTTATAATAGC
ACCATGATTTTGAAGTATCTAATACTAATGTTGATTTGTAGTGTTTCTTA
AATTTAACCTTCAAGTACTGGACTCGGGTAAAGCTTCTGTCATTACAATA
ATTGTCTGAAAACTCTCTCTAAATTTTCACTTTACTTTTTTGGCTCTATT
CCAAAATTTTGGTCCCGACAAACTCGATTGTAGTACCTCTTGGTTCTAGA
TCATAATGTTTACGTAGATTTAAAAAAATACTTTTTCTTATTTCGTTCTT
ATGCAAATTATCTACTTTTGGTTCTTTTTATTGCAGTCTGTAAAATTCAT
TTAATCATAGATCCATTATTCAAGTGCCAAATTTCTAAGAAACTTTGTTC
ATATCGTGAATGGTGTACTATAGACGCTGATTTTCAACTGCAATTACATT
TCCGAGAAATATCTAAGTAAAGCAGATGATATATTTTTTATTCTCATTAA
AAGTTCATGAATTAATGTTTTCTTATTCAGCGTATATTTATTCTTCAATT
CTTATACTTACTCAATATCAAGAAAATATTGTTTTATTTTTACCCTAAAA
TCCTATGTAGGTCCTTCCTTCTTAACCTTTTTTTCTTTTTGGAAAATTTA
AAGAGCCCTTCTATTTTTAAAAAACTGGGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015363XLOC_015363Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027296-exon-sc0000613-1575043694:42086..42597TCONS_00027296-exon-sc0000613-1575043694:42086..42597Clytia hemisphaericaexon
TCONS_00027296-exon-sc0000613-1575043694:32818..32908TCONS_00027296-exon-sc0000613-1575043694:32818..32908Clytia hemisphaericaexon
TCONS_00027296-exon-sc0000613-1575043694:32041..32185TCONS_00027296-exon-sc0000613-1575043694:32041..32185Clytia hemisphaericaexon
TCONS_00027296-exon-sc0000613-1575043694:31647..31805TCONS_00027296-exon-sc0000613-1575043694:31647..31805Clytia hemisphaericaexon
TCONS_00027296-exon-sc0000613-1575043694:29967..30221TCONS_00027296-exon-sc0000613-1575043694:29967..30221Clytia hemisphaericaexon
TCONS_00027296-exon-sc0000613-1575043694:29633..29786TCONS_00027296-exon-sc0000613-1575043694:29633..29786Clytia hemisphaericaexon
TCONS_00027296-exon-sc0000613-1575043694:29365..29426TCONS_00027296-exon-sc0000613-1575043694:29365..29426Clytia hemisphaericaexon
TCONS_00027296-exon-sc0000613-1575043694:29076..29227TCONS_00027296-exon-sc0000613-1575043694:29076..29227Clytia hemisphaericaexon
TCONS_00027296-exon-sc0000613-1575043694:28779..28830TCONS_00027296-exon-sc0000613-1575043694:28779..28830Clytia hemisphaericaexon
TCONS_00027296-exon-sc0000613-1575043694:26366..28523TCONS_00027296-exon-sc0000613-1575043694:26366..28523Clytia hemisphaericaexon
TCONS_00027296-exon-sc0000613-1510915933:42086..42597TCONS_00027296-exon-sc0000613-1510915933:42086..42597Clytia hemisphaericaexon
TCONS_00027296-exon-sc0000613-1510915933:32818..32908TCONS_00027296-exon-sc0000613-1510915933:32818..32908Clytia hemisphaericaexon
TCONS_00027296-exon-sc0000613-1510915933:32041..32185TCONS_00027296-exon-sc0000613-1510915933:32041..32185Clytia hemisphaericaexon
TCONS_00027296-exon-sc0000613-1510915933:31647..31805TCONS_00027296-exon-sc0000613-1510915933:31647..31805Clytia hemisphaericaexon
TCONS_00027296-exon-sc0000613-1510915933:29967..30221TCONS_00027296-exon-sc0000613-1510915933:29967..30221Clytia hemisphaericaexon
TCONS_00027296-exon-sc0000613-1510915933:29633..29786TCONS_00027296-exon-sc0000613-1510915933:29633..29786Clytia hemisphaericaexon
TCONS_00027296-exon-sc0000613-1510915933:29365..29426TCONS_00027296-exon-sc0000613-1510915933:29365..29426Clytia hemisphaericaexon
TCONS_00027296-exon-sc0000613-1510915933:29076..29227TCONS_00027296-exon-sc0000613-1510915933:29076..29227Clytia hemisphaericaexon
TCONS_00027296-exon-sc0000613-1510915933:28779..28830TCONS_00027296-exon-sc0000613-1510915933:28779..28830Clytia hemisphaericaexon
TCONS_00027296-exon-sc0000613-1510915933:26366..28523TCONS_00027296-exon-sc0000613-1510915933:26366..28523Clytia hemisphaericaexon
TCONS_00027296-exon-sc0000613-1491911889:42086..42597TCONS_00027296-exon-sc0000613-1491911889:42086..42597Clytia hemisphaericaexon
TCONS_00027296-exon-sc0000613-1491911889:32818..32908TCONS_00027296-exon-sc0000613-1491911889:32818..32908Clytia hemisphaericaexon
TCONS_00027296-exon-sc0000613-1491911889:32041..32185TCONS_00027296-exon-sc0000613-1491911889:32041..32185Clytia hemisphaericaexon
TCONS_00027296-exon-sc0000613-1491911889:31647..31805TCONS_00027296-exon-sc0000613-1491911889:31647..31805Clytia hemisphaericaexon
TCONS_00027296-exon-sc0000613-1491911889:29967..30221TCONS_00027296-exon-sc0000613-1491911889:29967..30221Clytia hemisphaericaexon
TCONS_00027296-exon-sc0000613-1491911889:29633..29786TCONS_00027296-exon-sc0000613-1491911889:29633..29786Clytia hemisphaericaexon
TCONS_00027296-exon-sc0000613-1491911889:29365..29426TCONS_00027296-exon-sc0000613-1491911889:29365..29426Clytia hemisphaericaexon
TCONS_00027296-exon-sc0000613-1491911889:29076..29227TCONS_00027296-exon-sc0000613-1491911889:29076..29227Clytia hemisphaericaexon
TCONS_00027296-exon-sc0000613-1491911889:28779..28830TCONS_00027296-exon-sc0000613-1491911889:28779..28830Clytia hemisphaericaexon
TCONS_00027296-exon-sc0000613-1491911889:26366..28523TCONS_00027296-exon-sc0000613-1491911889:26366..28523Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000613supercontigsc0000613:26366..42597 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
14.6764	17.3133	7.15849	7.79088	87.3836	42.9578	33.8514	37.6972	27.7416	21.8665	38.0836	23.5759	19.056	18.7924	17.1343	22.9868	18.7646	18.9677	8.90773	10.2984	24.7405	21.8648	29.0566	28.2484	29.1136	34.0421	25.9894	23.4179	17.9735	21.8939
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027296 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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