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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027399 ID=TCONS_00027399|Name=TCONS_00027399|organism=Clytia hemisphaerica|type=transcript|length=977bp
ccgcgcttaagggtagggtttttcagcatcccaaaatgcactgtaagggt
gtgtttctgtgagattgcactgcaagggtcgaattttgaaacaaattcaa
agtaattgttaaaaagaaaggtttctacttctcgtttgtttgaaacaGTT
TCTATTgactgataattacagctgacaagaatagttttctcagtttttct
ttgaaacagaaaatttcccaagcttcttctttcacgcagatttacagctg
agaaatatagtgcactatcatcatcatcatcatcatcatctttcgacTTA
CGTCGGAAAATTTGCGTAGCCTTCCTTCCACAATACCCGATCTTGCATGA
CTGTCTTTATTTCCTCAATCTCGAGACCTGTTTCCCTCTTCAGAGTATCC
AGGAAGGTTAACTTCCTTAGTCTTACTAGACCCGTTGGTGACCAGAAAAG
AAGTCTGGATATTAATTCTTCTTTTGCTCGAAAACAGTGGCCTGCGAACT
GAAGTCTTCTATTGGGGAGTATACGCGAGATGCGTGGTAGATTATTGTAT
ATTTGATTGAGGTTCGGATGGTTCGCCCAGTTtaaattttgaaccttttt
gaGGAGGTTTGTGTAACACCCGTCTATACTTTTTTCCATGGCTCTCGTCA
TTGTCCAGGTCTCGACCCATAAAGGAGAATAGGCTCGATTAAGGTTTTGA
AGGTTTGTACCTTAATCTTATTATCTAGATTAGACTTCCAAATTTTGTTT
AGTTTGTTGCAGGCCCTCCACGCGAGAGATTTTCTAATATTAAAGTCTTG
TTCAGAATCATTAATGTGCGAGCAAAGGTATTTAAAGTCATTTACTCTTT
TGATATTGACACTGTTCAGCGATTTCAGAGTACGGACGAAGTCAGAAGTG
CACAGAAATTCAGTTTTTCCCTCGTTACAAAAAAGGCCGACCTGACTAGC
GGCATTCTCGAGAGAGTGGAGAAGGTT Run BLAST on NCBI transcript from alignment at sc0000620:89229..90205 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027399 ID=TCONS_00027399|Name=TCONS_00027399|organism=Clytia hemisphaerica|type=transcript|length=977bp|location=Sequence derived from alignment at sc0000620:89229..90205 (Clytia hemisphaerica)
AACCTTCTCCACTCTCTCGAGAATGCCGCTAGTCAGGTCGGCCTTTTTTG
TAACGAGGGAAAAACTGAATTTCTGTGCACTTCTGACTTCGTCCGTACTC
TGAAATCGCTGAACAGTGTCAATATCAAAAGAGTAAATGACTTTAAATAC
CTTTGCTCGCACATTAATGATTCTGAACAAGACTTTAATATTAGAAAATC
TCTCGCGTGGAGGGCCTGCAACAAACTAAACAAAATTTGGAAGTCTAATC
TAGATAATAAGATTAAGGTACAAACCTTCAAAACCTTAATCGAGCCTATT
CTCCTTTATGGGTCGAGACCTGGACAATGACGAGAGCCATGGAAAAAAGT
ATAGACGGGTGTTACACAAACCTCCtcaaaaaggttcaaaatttaAACTG
GGCGAACCATCCGAACCTCAATCAAATATACAATAATCTACCACGCATCT
CGCGTATACTCCCCAATAGAAGACTTCAGTTCGCAGGCCACTGTTTTCGA
GCAAAAGAAGAATTAATATCCAGACTTCTTTTCTGGTCACCAACGGGTCT
AGTAAGACTAAGGAAGTTAACCTTCCTGGATACTCTGAAGAGGGAAACAG
GTCTCGAGATTGAGGAAATAAAGACAGTCATGCAAGATCGGGTATTGTGG
AAGGAAGGCTACGCAAATTTTCCGACGTAAgtcgaaagatgatgatgatg
atgatgatgatagtgcactatatttctcagctgtaaatctgcgtgaaaga
agaagcttgggaaattttctgtttcaaagaaaaactgagaaaactattct
tgtcagctgtaattatcagtcAATAGAAACtgtttcaaacaaacgagaag
tagaaacctttctttttaacaattactttgaatttgtttcaaaattcgac
ccttgcagtgcaatctcacagaaacacacccttacagtgcattttgggat
gctgaaaaaccctacccttaagcgcgg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027399-exon-sc0000620-1491911889:89229..90205 | TCONS_00027399-exon-sc0000620-1491911889:89229..90205 | Clytia hemisphaerica | exon |
| TCONS_00027399-exon-sc0000620-1510915933:89229..90205 | TCONS_00027399-exon-sc0000620-1510915933:89229..90205 | Clytia hemisphaerica | exon |
| TCONS_00027399-exon-sc0000620-1575043694:89229..90205 | TCONS_00027399-exon-sc0000620-1575043694:89229..90205 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000620 | supercontig | sc0000620:89229..90205 . |
Blast
The following BLAST results are available for this feature:
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