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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027481 ID=TCONS_00027481|Name=TCONS_00027481|organism=Clytia hemisphaerica|type=transcript|length=638bp
ATAGAGTAGAGGGAAGAACATAAAGAACAAGGAatctgaaaaatgttttt
ttcatacACAGTTACTGTTGTTCTCTTACTTGCAATCGCACATGGAATGG
AAAGTAGACCAGCAATAGACGGTGATATAAAACCGTCGCCGGCAATTCAG
ACAGTAGAAGTGTATTATACAGAACCAAAAGGATGTTATGacgaaaattg
gaaattttatttACCAGGAGAAGTTATGAGTAAACATTATGATGAGAAAA
CAAATAGTTGTAGTGGTGTGAAATGCGGAGCCGACGGTGTTGCTTATGCT
TGGGATGGTGTCAATTGCAAAGATAAGAAAATTGTCgatatgttttaatt
ttttgaaatatttaggtTCTCTGGAAACTGcttattttttgtccatttta
tcaTAGCTAAGAATTTCATTATTGTAAATAGTAATTTATTGAAGTTTCTC
TGTAGTTTTTTTGTTGTGTTATCCCGTCTGTAGTAAAAGGTTGCTTAGGG
TAGCAGTTTTTAATGAGAAATTTTGCTTAAGTGGTCTTCCAACAGTAAGA
ATAAAACGTTCTCAttataaagttttcttttgacGATTTCTCACAGAATG
TTTTAGAGAAATACTGCTGAATATCAAAAGATGATGTT Run BLAST on NCBI transcript from alignment at sc0000630:167219..168534+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027481 ID=TCONS_00027481|Name=TCONS_00027481|organism=Clytia hemisphaerica|type=transcript|length=1316bp|location=Sequence derived from alignment at sc0000630:167219..168534+ (Clytia hemisphaerica)
ATAGAGTAGAGGGAAGAACATAAAGAACAAGGAatctgaaaaatgttttt
ttcatacACAGGTAAGACCCTTGTTCGTTcaatatttttcgatttttaat
ttattattatCATAATGCGCCATTTACCACGAGTTTGCGAATCCTAATTG
ATCGATAAACTATAATTATTAAGTTACCAGGAAATTCGTAGAGTTCTTTC
ATCCGAAGATAAATAGTCTGAATTTTCATCGTCCACCTCAAACTTCGCCG
TTAATATTTAAATGAAAAGCAACTGAAAAGTCTTAATGGTCTTTgccaaa
tgaaagaaaaagtaaaagtaaaggTGATAGAGGTGACTAATTTGAAAATT
CGGTCGGGAGAAAATAAGTGATAATAAAATCCTGTCGAGGAAATGTGACT
GAAGTTTGGTTGggagaattaaaaaatgttggtcGCCTTTTTTCCACGAT
AACCACGGTAACAAGCAGCACAATAAAGCAATGTAACatacaggtttttt
ttttataagaacatccaaaattttgaagccttttttagctttaagcctaa
aaatattcttaacatattcttattatccccatttttttagtattcttgtc
cattttcttaaggaattgggtgttttagagtccacaaaaccttaaaatgt
tcttaacattttgcccatcgaagccttatgtttttatatagtttccATTA
ACCATCCATCATCtaaaaaccataaaactctTTTTTTAGTTACTGTTGTT
CTCTTACTTGCAATCGCACATGGAATGGAAAGTAGACCAGCAATAGACGG
TGATATAAAACCGTCGCCGGCAATTCAGACAGTAGAAGTGTATTATACAG
AACCAAAAGGATGTTATGacgaaaattggaaattttatttACCAGGAGAA
GTTATGAGTAAACATTATGATGAGAAAACAAATAGTTGTAGTGGTGTGAA
ATGCGGAGCCGACGGTGTTGCTTATGCTTGGGATGGTGTCAATTGCAAAG
ATAAGAAAATTGTCgatatgttttaattttttgaaatatttaggtTCTCT
GGAAACTGcttattttttgtccattttatcaTAGCTAAGAATTTCATTAT
TGTAAATAGTAATTTATTGAAGTTTCTCTGTAGTTTTTTTGTTGTGTTAT
CCCGTCTGTAGTAAAAGGTTGCTTAGGGTAGCAGTTTTTAATGAGAAATT
TTGCTTAAGTGGTCTTCCAACAGTAAGAATAAAACGTTCTCAttataaag
ttttcttttgacGATTTCTCACAGAATGTTTTAGAGAAATACTGCTGAAT
ATCAAAAGATGATGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027481-exon-sc0000630-1491911889:167219..167279 | TCONS_00027481-exon-sc0000630-1491911889:167219..167279 | Clytia hemisphaerica | exon |
| TCONS_00027481-exon-sc0000630-1510915933:167219..167279 | TCONS_00027481-exon-sc0000630-1510915933:167219..167279 | Clytia hemisphaerica | exon |
| TCONS_00027481-exon-sc0000630-1575043694:167219..167279 | TCONS_00027481-exon-sc0000630-1575043694:167219..167279 | Clytia hemisphaerica | exon |
| TCONS_00027481-exon-sc0000630-1491911889:167958..168534 | TCONS_00027481-exon-sc0000630-1491911889:167958..168534 | Clytia hemisphaerica | exon |
| TCONS_00027481-exon-sc0000630-1510915933:167958..168534 | TCONS_00027481-exon-sc0000630-1510915933:167958..168534 | Clytia hemisphaerica | exon |
| TCONS_00027481-exon-sc0000630-1575043694:167958..168534 | TCONS_00027481-exon-sc0000630-1575043694:167958..168534 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000630 | supercontig | sc0000630:167219..168534 + |
Blast
The following BLAST results are available for this feature:
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