TCONS_00027880 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027880
Unique NameTCONS_00027880
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3531

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027880 ID=TCONS_00027880|Name=TCONS_00027880|organism=Clytia hemisphaerica|type=transcript|length=3531bp
TAGTAAATACAGAAAAAACttctttatcaaaatatttcttgtactgAGGA
AAGTGAATCATGATAATTGAAAGTGTGGATTCATTGAAAACATGGCTCGT
CAAAGAATTGGAACCAATTTGTGATGCTGACCCTGCAGCATTGGCAAAAT
ATGTTATTGCTTTGGTAAAAAAGGAGAAGTCAGAAGCTGACCTCAAAGCT
CTGTGTGAAGATCAGCTTGATGTATTCCTTGGAGAAGAAACCAGACAATT
TGTTGGTAATCTATTTAAGGCACTGGGAGATAACTCCTATCTCCCTCCTG
CACCACTGCTCACCCAACCCACTGTTGAGGAGCCCATCAAAGAGGTGGAA
CAGAAAGGTACCAAGCGCAAATCTTTTGAAGAAACACCAAAAGATGACTT
TGAGAAACTTGCTAAAACTGAAAAGAACACTGATGTTGGTAAAGTTGTCA
GTGATAAAGAAAACATAGACAATGTAGATAACAGTAACAACGACGGAAGT
AAAAACGAAAATAATATTTCGGAAGGGAATGCAACAGAAAATAATAGACT
TCAAGTTGAGAGAAGTGATGATGTGCGCATGCGTAGTGTATCTAAAGATC
GCTCAATGAAGAGTATGTCACCAAGAGCTCGACATCGAACTCGTCGCTCG
TCACGATCACCCAACAGGAGCAGCCGACATTCTAGACACATGCCAAGTGG
TAGTGGTAGTAGTAGGAGCACACGTAGTGACAAATCACGAGATTCGCGAA
GCAACAGAGATAATGGTAGAAGAACCAAATCAAGCCGAAGAGAGGCAACT
AGAGAAAGATGCAGAGACTACGAAGAGAAGGGATATTGTATGCTTGGCGA
GACATGCCGTTTTGATCATGGACGCGATCCTGTGGAGGTGGACGATCGCA
ATCTTCCACATATGCTTTCCCTAGCCACTGCAAATACCTTCCCTCCTTCC
TCTCAACCCAACAACGCAGCTACCATGGCAAACCCATCTGTCCCAGTCTT
CCAAAATGTCATTGGTCAACGCCCAATGGTGCCACCTATAGGAACGGCCA
ATCTCAACACCTCTCTGACAACAGTGCAAGTTCAAAACACGCGACCCTCG
CCCGTTGAGATTAACACGCAAGTCCCTATCTTTCGACCACGCAACCCAAT
GGCTTTGTTCAGAAATATTTCTCCAACAGGTGTTCCACCAGCGATTCCAG
GTCAACCAACACCACCACAAGCGGCTATTCCACACCAACAACCACCCATC
AGTGAAACGTACAACCCTGAACAACCTTCTATTCTTGAAACGGATGAAGT
GCTGAAAGAAACCAAGATCTCTGTTGACAAAGTGAAAGAAGACGCAGATC
GTTCACAAGACGAGCTCGTCCAAATCGCGATGGGAAACGTCCCGCTCACA
CCTATCCTCGGCCAACAACCGACATTTCCAATCAACGGCGCTCAAACTAT
GAACTTTCCTGATCTGATACAACCTCAGCATATCATGCGACCTGCAGAGC
CCATGAAACAGGTGGTCCGAGTGACTGGCAACAAACCTTATCACGGTGGT
AACAACACCTGCTTGGAGATTCGAAAGATTCCAGGAGAACTTAACAACAT
GGTCAAGTTAAGCgaacatttccaaaaatttggtACCATCACCAAATTAC
AGAGTCCATTCGATGCAGACCCTCAAGGAGCTTTGATTGAGTTTGCGACA
AATCGTGAAGCTTATGCTGCTTATAGTTCGCCTGAAGCTATCCTTGGCAA
TCGGTTCATCAAGATGTTCTGGCATAAACCGGCAAAAGACGCAAATAACC
CTCACAACGGTGGTAAAGATAATGTTCGAGGTATAGGAGCAACATCTACT
ACAAGTGAAATCAAAACGGAAACATCTGCACCCTTACCTCCACCAGAACC
AAAGAAAGTGGCAAAAGCTGGTGAATTATATTTCCGAAACCCTAAATCCG
ATCCTAAACTCATTCAAATGGAGAAGAAAAAGGAACTCGAACAATTGAAG
AATGAACTGaggaagaaaaagcaaaaaagttatGAAGATTTGGTTGAAAA
ACAGAAACAAATCTTGAGCAAACTTCAAGAAAAAGGACtttctaaagaag
aaaaaaccaaACTGATGAAAACTTTCAGTACTTGTGATACAACTATTAAG
AAGCTGAAACATGAAATTCAAGAAGAAACTGTCCAAGCAAGGGCTGCACA
AAATCTTCATCAAGCCAAACCGTACAAAAATACGAAGAAAGAGATTCTTG
ACAAAGAAATAGATATTATTCATGGCAACTTACAAGGAGAAGAACTGGTA
GAAGCCAAGAAAGACCTGGAAATGCTTAAAGAAGAGATGGGCTACGATCC
CTCCGCCAGAGGTGGTCGAGGTGGATATCGGGGGCGTGGTCGAGGAGgtg
cctggtggaaaacacgtGGACGAGGGCGTGGCTCAGCAAGAGCTATGAGC
ACTGTTGACAATCGACCCAAGAAAATACTGGTGGCAGGTTATACAGTTGA
TGAAAAAGATAGTGTCCTTGCACATTTTAACACAATCAGTCACGTTGATC
AAATCGAAGAAATTTCAACCGAGAAAATGGTCATTACGTTTCCAAATCGT
AAAGGCGCGGAAATAGCAGCCATCCAGGGCATCGACTTCAACGGTAAACA
ACTGCAATTATCGTGGTTCACTGGACAAATCAACAAACCCACCAACACTT
CGACGACGGGTGCAACGGACCGACCCAAGATACAACGAAGAATGACGCGT
TCGCTCAGTCAAAGTCTGATGGAGAAAGACTTGGAAGACgacttattgGA
GGACGTGgacaaagaagaagaagacatGTTGTTGGCTGGTGTGGATGATG
AGGATGATGAGGATGATACTGAATCCATCACTGATCGATCCTGGAAAAGa
tgatttgtttgtttgttcctttgtttgtttgttcagATGTTTTATTTTCC
TAGCACAATTATTCCAATTGTATTTTAACCATTTTAGTATTGATATATGT
AATAATGTTTTTCTTATTATACTTTATAATGTGTTTTGAACACAGGGGTC
GAGTGTTTCCATTGGGACTAATTgtatggtttgtttttttggtcTTCTCT
TTTGGTGGTTTTCTCTGCTTTGTAATCGAACTTTTCCTTTATCTTGCAGc
tctttgatttttgttttgccTAAGGATCATAAACTACATTGATGTAAATA
CTTTCTAGGTaataatttatcatttttgatgaaattttatgACATGAAGG
GTTGCCTGtcctaaaaaaagacaaaagaacaactactcaaaaagaaaaga
gaaaagaattgaactaaaagaaaaatatggcaAAGGCAGGCACCTCCATC
ATATTgtatattttgttgtttgttttaaaacaaaaaaatgaaaagaaaag
gcAAGGTGTTGAAAAAAGAACAGAaacagaaaaaatataaaaaagaaaaa
gactcaGAAAAGCCTTCAACACCAAACACCCCCAAAACAACCCATAtcta
ttgaaaaacaatttatCTTGAAATATCTTGG
Run BLAST on NCBI

transcript from alignment at sc0000649:182907..190386+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027880 ID=TCONS_00027880|Name=TCONS_00027880|organism=Clytia hemisphaerica|type=transcript|length=7480bp|location=Sequence derived from alignment at sc0000649:182907..190386+ (Clytia hemisphaerica)
TAGTAAATACAGAAAAAACttctttatcaaaatatttcttgtactgAGGA
AAGTGAATCATGATAATTGAAAGTGTGGATTCATTGAAAACATGGCTCGT
CAAAGAATTGGAACCAATGTAAGTTCTTACTCAATGTGAATTTTGGATCc
cttttttttctccaattttcttATCAAACATTTTCTCCAAAGTGACTTTA
TGTGTGTGTTTGCAATGTTGTTTACGTGAATTGGAGTTTTAACAttggtt
tcaatttttttgggcGTTTGCTCGCATCTTTTTTTATTCTACTctatttt
catataaaaaaatcatgagaatgccaaaaaaattgaattaccTAATAACC
TGTTTATTTTAGTTGTGATGCTGACCCTGCAGCATTGGCAAAATATGTTA
TTGCTTTGGTAAAAAAGGAGAAGTCAGAAGCTGACCTCAAAGCTCTGTGT
GAAGATCAGCTTGATGTATTCCTTGGAGAAGGTAAATGTGACTGTGATTG
ATAATTGATCATTATATTTTAAAACTCAAGCTAATCTCTTCATTCTGTAA
GCTGTTAGTTAACTAAAAGAACTCTTTGTATTTTTCTCTTGTTTTAGAAA
CCAGACAATTTGTTGGTAATCTATTTAAGGCACTGGGAGATAACTCCTAT
CTCCCTCCTGCACCACTGCTCACCCAACCCACTGTTGAGGTAATGGTTTT
ACTCAAATCTTACAAGGCTCAGAATAAGGCAGCTTCAAGCATTAAGACAA
AAGCTTCCACCACCCAGACCAGACTGGCTTTGCCCTCTATACGATATCCA
TATAAATGTTGGCAAATGCTGACATTAGTATCGAAAGGGTTGAAAATGCC
TATGATAATATGATTAATCCCTTAACTCTCTTATTTATGATATgcgccat
tgcaatgtcttctgacattacatcacggacccaacagctgattggttgta
agtgacctaaaatcagtcaataggtcacttacaaccaatcagctattggg
tctgtGGAAGACaatgcaatggtgcatatcatgaatactccTACGTCAaa
caattttgtgccaatttaaCATTTCTAGGAGCCCATCAAAGAGGTGGAAC
AGAAAGGTACCAAGCGCAAATCTTTTGAAGAAACACCAAAAGATGACTTT
GAGAAACTTGCTAAAACTGAAAAGAACACTGATGTTGGTAAAGTTGTCAG
TGATAAAGAAAACATAGACAATGTAGATAACAGTAACAACGACGGAAGTA
AAAACGAAAATAATATTTCGGAAGGGAATGCAACAGAAAATAATAGACTT
CAAGTTGAGAGAAGTGATGATGTGCGCATGCGTAGTGTATCTAAAGATCG
CTCAATGAAGAGTATGTCACCAAGAGCTCGACATCGAACTCGTCGCTCGT
CACGATCACCCAACAGGAGCAGCCGACATTCTAGACACATGCCAAGTGGT
AGTGGTAGTAGTAGGAGCACACGTAGTGACAAATCACGAGATTCGCGAAG
CAACAGAGATAATGGTAGAAGAACCAAATCAAGCCGAAGAGAGGCAACTA
GAGAAAGATGCAGAGACTACGAAGGTTTGTTATTTGAAAAAATGGCCATC
CAAATTAATtcaaaagagaaaacattctttTGGATATACCTATATAAATT
TTAAAAGCTACGTAAACTAAAATAACTTAACTTGGATTGAATATTGTCAA
AGATTTATCGCGTTTTATGCAGCCCTATAAGCCTGAAACCAAATCCCTTG
TGATGTTAGGGTTGATAGGTGCTGACATTGAGATtgtgtttattttcatt
gcCAACTGATTCCCTGTGAACACCCTCTTTCTGTTATCATTATTCTTGAA
ATTTACTTCCTTTTTGCTTTGACTGTTTGATTTTAGAAAAGGgtgaaatg
tcaaaaatattgaATCCCTGCAAATaatgttttgtgtttgttttagAGAA
GGGATATTGTATGCTTGGCGAGACATGCCGTTTTGATCATGGACGCGATC
CTGTGGAGGTGGACGATCGCAATCTTCCACATATGCTTTCCCTAGCCACT
GCAAATACCTTCCCTCCTTCCTCTCAACCCAACAACGCAGCTACCATGGC
AAACCCATCTGTCCCAGTCTTCCAAAATGTCATTGGTCAACGCCCAATGG
TGCCACCTATAGGAACGGCCAATCTCAACACCTCTCTGACAACAGTGCAA
GTTCAAAACACGCGACCCTCGCCCGTTGAGATTAACACGCAAGTCCCTAT
CTTTCGACCACGCAACCCAATGGCTTTGTTCAGAAATATTTCTCCAACAG
GTAAGAGAAATAAAAACACCAGAGGTTGAGCAGTTAACCTTACTAAAAAA
TGGTCTCCACTTCTTATTAGGTCGAGGAATAtccagaaatttcaaaatat
aacaataggtgGCTTACTCCTAGTATTGTTAACAACATGGGACGAAACTT
TGGCATTAAGAATTCAAAACGCCATGGTGGCAACCACATATGACTAGTTC
AGTCGAAAGTAGATTgacttttgagattttcttttgAGGGGAGCTTGCGA
TTGGATCCTGCCAATTGTTTCATGGTGAAAAAGCTAACGTCATAGGCAAA
AGTTGTACAGTATACCTAAAGATTCTTTTCAATGTTGAGTTTTATCGAAA
TAATTGATGCCATTTAACgtcatgaaattttgaccaaaaaggtGTGTTAG
TCAACAAGTCTTAACGTacaaagaaatcaaacaaatttaaCACGGTCATT
GGTCATTCGCACTTATCTGACAGAATTTCAAGCTTTATAAAATGCATGTA
tttctttatgttttttttgtatatCTGTAGAAGTTGCCCCAAAAAATAGT
AGTTTATACAAAATTCAGTATCATTGAACAGCTCAACGTGGCTCATTTGT
TAGCATTACTACTATTTACCTATAGCCTGAGGTGCCTTTATGCAAAGGTT
GTGTGATGAAGGTTGTATTGGTTCAAGATTACCCTTGGATAGATTCTTAA
ATATTTTTACCTTatctaaaacattttttattaaaaattgtgaCTCGACC
TATGAATCACTAGGTACAGAGGAAAACCATTGCTATTTGTCCATGTTGTA
AAAATGACAAATCCATGCATAATAAGGacaaataattttctttatttcaa
acCAGGTGTTCCACCAGCGATTCCAGGTCAACCAACACCACCACAAGCGG
CTATTCCACACCAACAACCACCCATCAGTGAAACGTACAACCCTGAACAA
CCTTCTATTCTTGAAACGGATGAAGTGCTGAAAGAAACCAAGATCTCTGT
TGACAAAGTGAAAGAAGACGCAGATCGTTCACAAGACGAGCTCGTCCAAA
TCGCGATGGGAAACGTCCCGCTCACACCTATCCTCGGCCAACAACCGACA
TTTCCAATCAACGGCGCTCAAACTATGAACTTTCCTGATCTGATACAACC
TCAGCATATCATGCGACCTGCAGAGCCCATGAAACAGGTGGTCCGAGTGA
CTGGCAACAAACCTTATCACGGTGGTAACAACACCTGCTTGGAGATTCGA
AAGATTCCAGGAGAACTTAACAACATGGTCAAGTTAAGCgaacatttcca
aaaatttggtACCATCACCAAATTACAGGTATGTCGTCACCTACTAATGA
ATTGACAAATGTTATGAACTTTGCTTGGCTATATCAAAACAGCTGTCCAT
TTTCTAGCTCTTTCTATGCCCCTTTTTCAGTTacgaaattttgttttgtt
ttaaattacAGAGTCCATTCGATGCAGACCCTCAAGGAGCTTTGATTGAG
TTTGCGACAAATCGTGAAGCTTATGCTGCTTATAGTTCGCCTGAAGCTAT
CCTTGGCAATCGGTTCATCAAGATGTTCTGGCATAAACCGGCAAAAGACG
CAAATAACCCTCACAACGGTGGTAAAGATAATGTGAGTATCAGATTCCTG
TCATCTCATTTTTTGTATCAGCTCGCTTCTTTTTTTCTATATATTCTCTG
TTTGGAATTTGATAAGTTGTTGTTTATTCGATATCTATAGGTGAAATGTT
TTAAAGATTTGAACAGGCATACCTGACATTTGATGTGACGTAtcattctt
ttttctcttttttaataatCTGTGATTAAAGTCGTTCTCTTGATGACAGG
CAGACAGAAATGTTTCGTATATAAGTTGAGAGAAACTTGTTTTATGCTAT
AGGTTCGAGGTATAGGAGCAACATCTACTACAAGTGAAATCAAAACGGAA
ACATCTGCACCCTTACCTCCACCAGAACCAAAGANACCTGACATTTGATG
TGACGTAtcattcttttttctcttttttaataatCTGTGATTAAAGTCGT
TCTCTTGACGACAGGCAGACAGAAATGTTTCGTATATAAGTTGAGAGAAA
CTTGTTCTATGCTATAGGTTCGAGGTATAGGAGCAACATCTACTACAAGT
GAAATCAAAACGGAAACATCTGCACCCTTACCTCCACCAGAACCAAAGAA
AGTGGCAAAAGCTGGTGAATTATATTTCCGAAACCCTAAATCCGATCCTA
AACTCATTCAAATGGAGAAGAAAAAGGTTTGTCGTTTTCTACTTACATTT
GAACAGGTTAACTAACTCGACCGGTTCGTTATTCTTACTTGATTGCTTCC
TATTTTTATAGACCAAGACTTTATATAGTATTTCACACTAAATAATCTTA
TGTTTCTTTCAGGAACTCGAACAATTGAAGAATGAACTGaggaagaaaaa
gcaaaaaagttatGAAGATTTGGTTGAAAAACAGAAACAAATCTTGAGCA
AACTTCAAGAAAAAGGACtttctaaagaagaaaaaaccaaACTGATGAAA
GTGAGTTATTCATATTggtatcaaataattttttattggtatcaagattt
tttcactgttttatGTTGATACAGCTTCAAGATTTCTTCAACTCGGAGAT
GAAGCGTTCATTTTGCAttggaaacaaaaaatattgaagcaTAATCAAGA
TCTTTTTGaatatgtttaaaaattacTTCTCATTGTGACTTTCTTCTTAG
ACTTTCAGTACTTGTGATACAACTATTAAGAAGCTGAAACATGAAATTCA
AGAAGAAACTGTCCAAGCAAGGGCTGCACAAAATCTTCATCAAGCCAAAC
CGTACAAAAATGTAGGTTGTTTTTCCTTCTTTTAGTGTTCTAAGCATCAT
CTCAAGGCATCATTAGAAAATAATGGAAATATTATTACACAGTttgttat
cattattttttgtatttctttATAGACGAAGAAAGAGATTCTTGACAAAG
AAATAGATATTATTCATGGCAACTTACAAGGAGAAGAACTGGTAGAAGCC
AAGAAAGACCTGGAAATGCTTAAAGAAGAGGTAAATTATTTTCAGGGAAT
GATGTGTATAAGAAAGGCCAAACAATACAGGCTTTTAGAATGAAAGTCGT
CGATTTTCTAGTTACGTTTCTCTCTGGAATGGTATTTCCTGTAATTATGT
CCCTAAtcgtttattattttctttcacCAGATGGGCTACGATCCCTCCGC
CAGAGGTGGTCGAGGTGGATATCGGGGGCGTGGTCGAGGAGgtgcctggt
ggaaaacacgtGGACGAGGGCGTGGCTCAGCAAGAGCTATGAGCACTGTT
GACAATCGACCCAAGAAAATACTGGTGGCAGGTTATACAGTTGATGAAAA
AGATAGTGTCCTTGCACANGGGGCGTGGTCGAGGAGgtgcctggtggaaa
acacgtGGACGAGGGCGTGGTTCAGCAAGAGCTATGAGCACTGTTGACAA
TCGACCCAAGAAAATACTGGTGGCAGGTTATACAGTTGATGAAAAAGATA
GTGTCCTTGCACATTTTAACGTAAGTCAAAAATCGCGGAActggtaaaat
atttctcatattgtactcgcaaatgtccgataactattacttagaGAGTT
GGTGGAATCTTCTAAGGAACTTTTTTGCAGGCATTAATCCAGCAGATTTA
GATGTTATTAAAGTAAGAGTCAATCTGCCCTAACCGTTTCAACACAAAGC
AAACTATGAATATAGAcaaattgtttttcttgtttcatATAGTTTTGACA
CGTGGTTTGCCCTTTAAAGCAGACCGTGTCTTTGTTGAATTTTTCTGTTC
GCATATTGTAATGGAACATTGAAGCATTTTGTTTTACCGTTAGGGGTCCT
TTAAGAGCCCCAGATTAGTAACCGAGTCCAAGTTACCCATATTTCATCGC
TCATCAGTCCTTATAGCTGTTTACCCTCTTTATTTACAGACAATCAGTCA
CGTTGATCAAATCGAAGAAATTTCAACCGAGAAAATGGTCATTACGTTTC
CAAATCGTAAAGGCGCGGAAATAGCAGCCATCCAGGGCATCGACTTCAAC
GGTAAACAACTGCAATTATCGTGGTTCACTGGACAAATCAACAAACCCAC
CAACACTTCGACGACGGGTGCAACGGACCGACCCAAGATACAACGAAGAA
TGACGCGTTCGCTCAGTCAAAGTCTGATGGAGAAAGACTTGGAAGACgac
ttattggtatatattacATAATCTCTCTATTCTTCAAGTCAATTCAGGTG
AACCCTGAGAATCGAAAATATTTAATCATTCATCTGTTGCacagtttgtt
ttgttttttcttaggATTGGGGTCGATTAACATTTCAGACGAAAGAACAC
TGATATTGTTTGTTATTTTAaatttcgtttcgtttcgtttgTTTCAGGAG
GACGTGgacaaagaagaagaagacatGTTGTTGGCTGGTGTGGATGATGA
GGATGATGAGGATGATACTGAATCCATCACTGATCGATCCTGGAAAAGat
gatttgtttgtttgttcctttgtttgtttgttcagATGTTTTATTTTCCT
AGCACAATTATTCCAATTGTATTTTAACCATTTTAGTATTGATATATGTA
ATAATGTTTTTCTTATTATACTTTATAATGTGTTTTGAACACAGGGGTCG
AGTGTTTCCATTGGGACTAATTgtatggtttgtttttttggtcTTCTCTT
TTGGTGGTTTTCTCTGCTTTGTAATCGAACTTTTCCTTTATCTTGCAGct
ctttgatttttgttttgccTAAGGATCATAAACTACATTGATGTAAATAC
TTTCTAGGTaataatttatcatttttgatgaaattttatgACATGAAGGG
TTGCCTGtcctaaaaaaagacaaaagaacaactactcaaaaagaaaagag
aaaagaattgaactaaaagaaaaatatggcaAAGGCAGGCACCTCCATCA
TATTgtatattttgttgtttgttttaaaacaaaaaaatgaaaagaaaagg
cAAGGTGTTGAAAAAAGAACAGAaacagaaaaaatataaaaaagaaaaag
actcaGAAAAGCCTTCAACACCAAACACCCCCAAAACAACCCATAtctat
tgaaaaacaatttatCTTGAAATATCTTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015757XLOC_015757Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027880-exon-sc0000649-1491911889:182907..183024TCONS_00027880-exon-sc0000649-1491911889:182907..183024Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1510915933:182907..183024TCONS_00027880-exon-sc0000649-1510915933:182907..183024Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1575043694:182907..183024TCONS_00027880-exon-sc0000649-1575043694:182907..183024Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1491911889:183269..183387TCONS_00027880-exon-sc0000649-1491911889:183269..183387Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1510915933:183269..183387TCONS_00027880-exon-sc0000649-1510915933:183269..183387Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1575043694:183269..183387TCONS_00027880-exon-sc0000649-1575043694:183269..183387Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1491911889:183504..183595TCONS_00027880-exon-sc0000649-1491911889:183504..183595Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1510915933:183504..183595TCONS_00027880-exon-sc0000649-1510915933:183504..183595Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1575043694:183504..183595TCONS_00027880-exon-sc0000649-1575043694:183504..183595Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1491911889:183985..184480TCONS_00027880-exon-sc0000649-1491911889:183985..184480Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1510915933:183985..184480TCONS_00027880-exon-sc0000649-1510915933:183985..184480Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1575043694:183985..184480TCONS_00027880-exon-sc0000649-1575043694:183985..184480Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1491911889:184853..185206TCONS_00027880-exon-sc0000649-1491911889:184853..185206Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1510915933:184853..185206TCONS_00027880-exon-sc0000649-1510915933:184853..185206Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1575043694:184853..185206TCONS_00027880-exon-sc0000649-1575043694:184853..185206Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1491911889:186062..186534TCONS_00027880-exon-sc0000649-1491911889:186062..186534Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1510915933:186062..186534TCONS_00027880-exon-sc0000649-1510915933:186062..186534Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1575043694:186062..186534TCONS_00027880-exon-sc0000649-1575043694:186062..186534Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1491911889:186668..186838TCONS_00027880-exon-sc0000649-1491911889:186668..186838Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1510915933:186668..186838TCONS_00027880-exon-sc0000649-1510915933:186668..186838Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1575043694:186668..186838TCONS_00027880-exon-sc0000649-1575043694:186668..186838Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1491911889:187324..187482TCONS_00027880-exon-sc0000649-1491911889:187324..187482Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1510915933:187324..187482TCONS_00027880-exon-sc0000649-1510915933:187324..187482Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1575043694:187324..187482TCONS_00027880-exon-sc0000649-1575043694:187324..187482Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1491911889:187619..187756TCONS_00027880-exon-sc0000649-1491911889:187619..187756Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1510915933:187619..187756TCONS_00027880-exon-sc0000649-1510915933:187619..187756Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1575043694:187619..187756TCONS_00027880-exon-sc0000649-1575043694:187619..187756Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1491911889:187957..188067TCONS_00027880-exon-sc0000649-1491911889:187957..188067Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1510915933:187957..188067TCONS_00027880-exon-sc0000649-1510915933:187957..188067Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1575043694:187957..188067TCONS_00027880-exon-sc0000649-1575043694:187957..188067Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1491911889:188182..188286TCONS_00027880-exon-sc0000649-1491911889:188182..188286Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1510915933:188182..188286TCONS_00027880-exon-sc0000649-1510915933:188182..188286Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1575043694:188182..188286TCONS_00027880-exon-sc0000649-1575043694:188182..188286Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1491911889:188437..188587TCONS_00027880-exon-sc0000649-1491911889:188437..188587Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1510915933:188437..188587TCONS_00027880-exon-sc0000649-1510915933:188437..188587Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1575043694:188437..188587TCONS_00027880-exon-sc0000649-1575043694:188437..188587Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1491911889:188733..188776TCONS_00027880-exon-sc0000649-1491911889:188733..188776Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1510915933:188733..188776TCONS_00027880-exon-sc0000649-1510915933:188733..188776Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1575043694:188733..188776TCONS_00027880-exon-sc0000649-1575043694:188733..188776Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1491911889:189196..189462TCONS_00027880-exon-sc0000649-1491911889:189196..189462Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1510915933:189196..189462TCONS_00027880-exon-sc0000649-1510915933:189196..189462Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1575043694:189196..189462TCONS_00027880-exon-sc0000649-1575043694:189196..189462Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1491911889:189654..190386TCONS_00027880-exon-sc0000649-1491911889:189654..190386Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1510915933:189654..190386TCONS_00027880-exon-sc0000649-1510915933:189654..190386Clytia hemisphaericaexon
TCONS_00027880-exon-sc0000649-1575043694:189654..190386TCONS_00027880-exon-sc0000649-1575043694:189654..190386Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000649supercontigsc0000649:182907..190386 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.000396638	0.000397246	0.00296564	0.000253685	5.8501e-06	4.8291e-06	4.26468e-06	3.47762e-06	4.73988e-07	5.02744e-07	0.000156202	4.01392e-07	5.09779e-07	4.24407e-09	0.000229142	2.91187e-05	1.49789e-07	7.41596e-05	3.28482e-07	2.42737e-06	0.00135329	0.0162902	9.99021e-05	6.696e-05	2.91356e-07	2.77564e-08	0.000793212	0.00286441	0.000276203	0.00329819
Blast
[Close]
BLAST of TCONS_00027880 vs. Swiss-Prot (Human)
Match: RBM26 (RNA-binding protein 26 OS=Homo sapiens GN=RBM26 PE=1 SV=3)

HSP 1 Score: 120.168 bits (300), Expect = 2.602e-27
Identity = 56/80 (70.00%), Postives = 67/80 (83.75%), Query Frame = 3 
Query:   60 MIIESVDSLKTWLVKELEPICDADPAALAKYVIALVKKEKSEADLKALCEDQLDVFLGEETRQFVGNLFKALGDNSYLPP 299
            MIIE+ ++LK+WL K LEPICDADP+ALAKYV+ALVKK+KSE +LKALC DQLDVFL +ET+ FV  LF A+   SYLPP
Sbjct:    5 MIIENFEALKSWLSKTLEPICDADPSALAKYVLALVKKDKSEKELKALCIDQLDVFLQKETQIFVEKLFDAVNTKSYLPP 84

HSP 2 Score: 107.457 bits (267), Expect = 2.285e-23
Identity = 46/78 (58.97%), Postives = 60/78 (76.92%), Query Frame = 3 
Query: 1545 GGNNTCLEIRKIPGELNNMVKLSEHFQKFGTITKLQSPFDADPQGALIEFATNREAYAAYSSPEAILGNRFIKMFWHK 1778
            G  NT LE+RK+P ELNN+ KL+EHF +FGT+  LQ  ++ DP+GALI+FAT  EA  A SS EA+L NRFIK++WH+
Sbjct:  528 GNENTKLELRKVPPELNNISKLNEHFSRFGTLVNLQVAYNGDPEGALIQFATYEEAKKAISSTEAVLNNRFIKVYWHR 605
The following BLAST results are available for this feature:
BLAST of TCONS_00027880 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RBM262.602e-2770.00RNA-binding protein 26 OS=Homo sapiens GN=RBM26 PE... [more]
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