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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027906 ID=TCONS_00027906|Name=TCONS_00027906|organism=Clytia hemisphaerica|type=transcript|length=949bp
ATCTTCAAAGCTGTTTTCAAGACATTCGAGATTCGACCAGTATAATTCAG
AAGTTTTCATAATAAAAGAGACTGATACAGAGGCTGAGGAGGAAGTTGTA
GAAGAAGTGCTTCCAGCAAAGATGGCGTCTATGGTTGAGTTGTTTAAACC
AAACGCAGAACTGACAGGCATTATTTGTTTATCTGACACTGATAGTAATT
CTTGATTCTTTTCATGAGAGTTTTGAGCTTTACTGTGGTATCATTGGNAG
CAAAGATGGCGTCTATGGTTGAGTTGTTTAAACCAAACGCAGAACTGACA
GGCATTATTTGTTTATCTGACACTGATAGTAATTCTTGATTCTTTTCATG
AGAGTTTTGAGCTTTACTGGGGTATCATTGGTAATTTACAACTGTAAGGC
ATTTATAGATTCAGTTGCTaagttccatgatggtgatattcttactatat
tcttaatattttggccaatttgatcatattcttataaagtattttcttat
aaaaaaagcgtataCATCATATTGATAGCTTTATTGATTTATGACATTGA
TCAATATTGATCGATTGGTTTATGATGTTGTACAATTTAATGATtcaata
aaaatcaataaataaggATAATGGCACAGAGTTTTCAATTTCTGATATGC
ATACTTTTAAATGGTGGGCGTTGGTTTGAGATTCTTTGCACTATGGCATT
CATTTATCATCTTgtaaaaaaatccaaactttGTTTTGCTTGAATATCCT
ATGAGATTTAGAAAAGgtatagtaaaaatatttcaaaatattccatCATA
TCTATTTAATAAATCTGAAAATGTAATGTATACTTCTTTGATGAACTACC
TTCAATGTGTAGACAACTGGTAGCAAATAAATAGTCTGTCAATGTAAGCT
TTCAATTGCTTTCATAGCCCAAGTTCTTAAATGGGCTACTTTGACAGTA Run BLAST on NCBI transcript from alignment at sc0000653:97761..98709 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027906 ID=TCONS_00027906|Name=TCONS_00027906|organism=Clytia hemisphaerica|type=transcript|length=949bp|location=Sequence derived from alignment at sc0000653:97761..98709 (Clytia hemisphaerica)
TACTGTCAAAGTAGCCCATTTAAGAACTTGGGCTATGAAAGCAATTGAAA
GCTTACATTGACAGACTATTTATTTGCTACCAGTTGTCTACACATTGAAG
GTAGTTCATCAAAGAAGTATACATTACATTTTCAGATTTATTAAATAGAT
ATGatggaatattttgaaatatttttactatacCTTTTCTAAATCTCATA
GGATATTCAAGCAAAACaaagtttggatttttttacAAGATGATAAATGA
ATGCCATAGTGCAAAGAATCTCAAACCAACGCCCACCATTTAAAAGTATG
CATATCAGAAATTGAAAACTCTGTGCCATTATccttatttattgattttt
attgaATCATTAAATTGTACAACATCATAAACCAATCGATCAATATTGAT
CAATGTCATAAATCAATAAAGCTATCAATATGATGtatacgcttttttta
taagaaaatactttataagaatatgatcaaattggccaaaatattaagaa
tatagtaagaatatcaccatcatggaacttAGCAACTGAATCTATAAATG
CCTTACAGTTGTAAATTACCAATGATACCCCAGTAAAGCTCAAAACTCTC
ATGAAAAGAATCAAGAATTACTATCAGTGTCAGATAAACAAATAATGCCT
GTCAGTTCTGCGTTTGGTTTAAACAACTCAACCATAGACGCCATCTTTGC
TNCCAATGATACCACAGTAAAGCTCAAAACTCTCATGAAAAGAATCAAGA
ATTACTATCAGTGTCAGATAAACAAATAATGCCTGTCAGTTCTGCGTTTG
GTTTAAACAACTCAACCATAGACGCCATCTTTGCTGGAAGCACTTCTTCT
ACAACTTCCTCCTCAGCCTCTGTATCAGTCTCTTTTATTATGAAAACTTC
TGAATTATACTGGTCGAATCTCGAATGTCTTGAAAACAGCTTTGAAGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027906-exon-sc0000653-1491911889:97761..98709 | TCONS_00027906-exon-sc0000653-1491911889:97761..98709 | Clytia hemisphaerica | exon |
| TCONS_00027906-exon-sc0000653-1510915933:97761..98709 | TCONS_00027906-exon-sc0000653-1510915933:97761..98709 | Clytia hemisphaerica | exon |
| TCONS_00027906-exon-sc0000653-1575043694:97761..98709 | TCONS_00027906-exon-sc0000653-1575043694:97761..98709 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000653 | supercontig | sc0000653:97761..98709 . |
Blast
The following BLAST results are available for this feature:
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