|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028146 ID=TCONS_00028146|Name=TCONS_00028146|organism=Clytia hemisphaerica|type=transcript|length=984bp
gttcatttgttttgaaattttgttgctttgattggtcagtcatttgattg
atggctatgcaagtttccctccactgatgcaagttacccgacttcacggt
aggtAGGTGAGATGTGTCAGTTTCCAGACTTTCCCACTCTAGATAACTAT
TTTCCAATCGATGACTACCGTAAGTAGTTCGTCTAATaacgacatccctc
gtctaaattccgacacccttctttagagaagggaataatatgaaagcttg
aatcactgattgaaaaggattattcctctctgaccactatataagcaaag
aaaaacagtttcaatctttctataaatttcaactgataaaaagggtgtct
gACACGTCGACAcgttagaccaagttacggtaatcGCTAACCAACCGATT
GATTGGATATCGATTGATTTCAATAATCATTGATAGGTAATCGAGACTAT
TCTAACTGATAATAGATTGGTTTTTCATCGATTGGCTGTCGATTGATTGT
GACCAATATCTTTAGAGTAAATCGATGGAAAATCCATCAATTGATAGCCA
ATCAAAAGCTTCCCGTAAATCTTGATTATAATTGCCTATCGATTATAAAA
AACAATCGATATCCGATCCatcaattatttatcgattagtaaTAGATTGG
AAAAGGATATCGATTGTATCGAATGGGAGAGTCTGGCATGTTGGATGGGC
GCTTCGTGGGATAGTGGTCATTAACCTTGAATACTACACATGCTTCAAAG
GTTTCGATTCCTGCTGGCAACAGTTCACTTGGAAAGTGAATGAGccttca
cccgggtcaacccaaATGGATGGTGAGTGAGGGAAACAATGACAAGATTG
TTATCTAATTTGATCGACCTGCTTGAAATCAAATTTCCTACTGTaaagtc
aatcaaaaaattctcaaaaaatgtgTAACTCCACGTCTCGATGATATGGA
TGCAATGCAAATAACAGCAGtaacaaagttttat Run BLAST on NCBI transcript from alignment at sc0000665:70110..71093 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028146 ID=TCONS_00028146|Name=TCONS_00028146|organism=Clytia hemisphaerica|type=transcript|length=984bp|location=Sequence derived from alignment at sc0000665:70110..71093 (Clytia hemisphaerica)
ataaaactttgttaCTGCTGTTATTTGCATTGCATCCATATCATCGAGAC
GTGGAGTTAcacattttttgagaattttttgattgactttACAGTAGGAA
ATTTGATTTCAAGCAGGTCGATCAAATTAGATAACAATCTTGTCATTGTT
TCCCTCACTCACCATCCATttgggttgacccgggtgaaggCTCATTCACT
TTCCAAGTGAACTGTTGCCAGCAGGAATCGAAACCTTTGAAGCATGTGTA
GTATTCAAGGTTAATGACCACTATCCCACGAAGCGCCCATCCAACATGCC
AGACTCTCCCATTCGATACAATCGATATCCTTTTCCAATCTAttactaat
cgataaataattgatGGATCGGATATCGATTGTTTTTTATAATCGATAGG
CAATTATAATCAAGATTTACGGGAAGCTTTTGATTGGCTATCAATTGATG
GATTTTCCATCGATTTACTCTAAAGATATTGGTCACAATCAATCGACAGC
CAATCGATGAAAAACCAATCTATTATCAGTTAGAATAGTCTCGATTACCT
ATCAATGATTATTGAAATCAATCGATATCCAATCAATCGGTTGGTTAGCg
attaccgtaacttggtctaacgTGTCGACGTGTcagacaccctttttatc
agttgaaatttatagaaagattgaaactgtttttctttgcttatatagtg
gtcagagaggaataatccttttcaatcagtgattcaagctttcatattat
tcccttctctaaagaagggtgtcggaatttagacgagggatgtcgttATT
AGACGAACTACTTACGGTAGTCATCGATTGGAAAATAGTTATCTAGAGTG
GGAAAGTCTGGAAACTGACACATCTCACCTacctaccgtgaagtcgggta
acttgcatcagtggagggaaacttgcatagccatcaatcaaatgactgac
caatcaaagcaacaaaatttcaaaacaaatgaac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028146-exon-sc0000665-1491911889:70110..71093 | TCONS_00028146-exon-sc0000665-1491911889:70110..71093 | Clytia hemisphaerica | exon |
| TCONS_00028146-exon-sc0000665-1510915933:70110..71093 | TCONS_00028146-exon-sc0000665-1510915933:70110..71093 | Clytia hemisphaerica | exon |
| TCONS_00028146-exon-sc0000665-1575043694:70110..71093 | TCONS_00028146-exon-sc0000665-1575043694:70110..71093 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000665 | supercontig | sc0000665:70110..71093 . |
Blast
The following BLAST results are available for this feature:
|
