TCONS_00028176 (transcript) - C. hemisphaerica

Overview
NameTCONS_00028176
Unique NameTCONS_00028176
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2721

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00028176 ID=TCONS_00028176|Name=TCONS_00028176|organism=Clytia hemisphaerica|type=transcript|length=2721bp
TTAAGTGAAAAACGTGCAATGAGTGTTTATGCAAAAGTTAGagagaatga
aaaatatttatagcCTACATGATGATTCTTTAAAAGTGAATTGTATTGAA
AGTGGAAATTACTGAGGACTACTAAAGTTTTTGTAGTTCATCCAGAACAA
GGACAGGCCTGGAAAGACCAACGTATCAAACCTTCAGGAGCATTATGCGC
AGAAAGATTACCAAACTGAATGACTTTTGAAACGTCGACTGAGAGTAATT
GTAAGAAAATTAAAGTATGGCAGAAAACCCTGAACAACCCCCACCACTAG
AACGCGGATACGACTTTGTGCTGGTAGTGAAAGAACAAGGGGTGGATTTC
GAATGTTCTATTTGTCGATCGATTCTCCGTGACGCACACTCCACACCGTG
CCATCATGCTTTTTGTCGTAATTGTTTGGCTACTTGGACCAAAGAGCTGG
AACAAGGGAACAGACCAATCACTTGTCCCAATTGCAATTTGATCTTTGAC
CCTAAAAAGGTCCAATACAATGGATTTGTAGATCGAATGGTGAAAACCAG
TCTAGAGATCAAATGTAAACAAGAGGATAAGGGATGTCACTGGCAAGGAG
AAATCATCGACTATCAGGATCACCAAGGCACGTGTGATTACGAGTTGGTC
GAATGTCAAAACAAAGGATGTCGGGAAGTATTGTCGAGAAAAGAATTGGT
GCAACATCAAAAGGATTGTAAATATCGAACGACTGAATGCCTCTATTGTA
GGCTGATAAAGCCAATAATTGAAATGAAGGACCACCATTCCGAATGCCAG
ATGATGAAAATTATTTGCCCAAATGAACAATGTGAAACTCAAGTGCTGCG
CAAAGATATCAAAGAGCATTTGAACAAAGATTGCCTTTATGAGAAAATTT
CATGCTGCTATTCTGAGATTGGTTGCCAGAAAAAGGTGGAACGTTGTTTG
ATGGCTATCCATCAGAAAGATTTCCTTGTGGAACATCAAATGATGATTTT
CCAAGACAACAAGAAAGTCCAGCAATCACTTCTggagaaaaataaacaac
tggaaGATGATTTGAAGGCggaaaagaaaaagaacgaGAAATTGAAGGGA
GAAATGGAAGTGATCaaaaagaaagttgaaaatttggaaCAAGAACAACA
AAGATGCAATGAACTTCACCGAAACATCTTTTCAATCATTGATACGCTCA
TTTATTGGGTATCAAAAGGCTTCAAAAGCAAAGAGAAGGTCATcaaagtt
ttggggaaaatccaATTGTCTCATCTCATAAAGGGGCAATATAATTTACT
TGGACGGATTGTCCCGTCNTTGTCTCATCTCATAAAGGGACAATATAATT
TACTTGGACGGATTGTCCCGTCAACTCCTTTCAAATTCATGTCATTCTTC
AGCACAACTTTTGTCAACGAAAAATACAAATGTTTTGAGCTTAAGGGTAA
AGAAAAGAGTTTTAGCCGAATCATTTTCAAACATGTTCTACGTGACATGA
AATTCAATCAAATGTATCAGACAGGTTCATTTGTCATGGTCAAaataaga
ttatttctcattgAGAGAGAATACAAAGTCAAGTACGTGGATAAAAAAGA
ATTTACAGAATTGAGTAGACAAGCCAACGATTTCAGAAATAACAACGTGG
TCTTCAGTTTTCAAGGAAATCGAACAATCTTTTTATACCACCCAGATATT
TCATCCATGAATGTAAAAATCTGTGTTATCAGAAATAGCCGGTTGACAAG
TGAAACATTTGCATTAAACGATGAATCCTGTGCAGGCGATTTCGCCGATT
GTTGCCTTGAACATATCGATGGGAATGAATTTCAATTTAACTGCCATAAT
GCTGAAAAACAGTTTATCTTACTGGTACTTTATACATAACATTTTGTGCT
CTCATCAGCTCGACATTTTGGagtaaaaaggaaaatttcgtGTGCACACT
TAAGGTCCATGGAGGATTACATCATCGAAAAAACACTTTTGCGTcaattt
atttaattattcTATCAAGTAGTATTCTAGAGGTACTGTCATTGACAATC
GACGGTTCAGATCATTACTGAAATTTTGCCGGAAATTTTACCATAATTAA
TTGACAACCAGGATAGAAACAACTTAAGGCTTTCAGTTAGCAGGTTTATA
AACTCTATTATTTCTGGTCACGGGATCAATATCGATGGGCATCTACAGTC
GTTTTGCTGGTTGACGTCGCATTGTCATTCCACTGCAACGACCTCCCAAA
TATTATTGACGAAATTTACCTGAtaccaaatatttttttgtaattaattt
GTAATTAAACTGAACGATGAAATAGCTTTTGAAACATACCTGGTACTCGG
TGAGGTAGAATCCTTTGACGACTCCTTCATCGATGATACCCAAATAAACT
GTCCCTCCTCGACCAGAGTTCAGAAATGCATTCAACGCCCtgtacaaaaa
tataaataaaatgttgAGTCATTCTTGTCCATTTAATGGCATGTACATAA
CTaacaaaatctagaaaatttctAGTGATTAAAAAATATCCTTTCACCCT
TTTGCCTGTTGAACAGATCATGATAAGCAGATATTGCATGGCCTTTTTCA
GGTATTGCGATTTATTAGCTCGAGGTTAGATGTCAACAAAGCCAAGTGGA
TTTGAATATCATTTGAgagttaataaatccaatatcTGATAAAAGCAGAC
ATCATTATTGTACCATACAGG
Run BLAST on NCBI

protein sequence of TCONS_00028176-protein

>TCONS_00028176-protein ID=TCONS_00028176-protein|Name=TCONS_00028176-protein|organism=Clytia hemisphaerica|type=polypeptide|length=540bp
MAENPEQPPPLERGYDFVLVVKEQGVDFECSICRSILRDAHSTPCHHAFC
RNCLATWTKELEQGNRPITCPNCNLIFDPKKVQYNGFVDRMVKTSLEIKC
KQEDKGCHWQGEIIDYQDHQGTCDYELVECQNKGCREVLSRKELVQHQKD
CKYRTTECLYCRLIKPIIEMKDHHSECQMMKIICPNEQCETQVLRKDIKE
HLNKDCLYEKISCCYSEIGCQKKVERCLMAIHQKDFLVEHQMMIFQDNKK
VQQSLLEKNKQLEDDLKAEKKKNEKLKGEMEVIKKKVENLEQEQQRCNEL
HRNIFSIIDTLIYWVSKGFKSKEKVIKVLGKIQLSHLIKGQYNLLGRIVP
XLSHLIKGQYNLLGRIVPSTPFKFMSFFSTTFVNEKYKCFELKGKEKSFS
RIIFKHVLRDMKFNQMYQTGSFVMVKIRLFLIEREYKVKYVDKKEFTELS
RQANDFRNNNVVFSFQGNRTIFLYHPDISSMNVKICVIRNSRLTSETFAL
NDESCAGDFADCCLEHIDGNEFQFNCHNAEKQFILLVLYT
Run BLAST on NCBI

transcript from alignment at sc0000667:81019..92177-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00028176 ID=TCONS_00028176|Name=TCONS_00028176|organism=Clytia hemisphaerica|type=transcript|length=11159bp|location=Sequence derived from alignment at sc0000667:81019..92177- (Clytia hemisphaerica)
TTAAGTGAAAAACGTGCAATGAGTGTTTATGCAAAAGTTAGAGAGAATGA
AAAATATTTATAGCCTACATGATGATTCTTTAAAAGTGAATTGTATTGAA
AGTGGAAATTACTGAGGACTACTAAAGTTTTTGTAGTTCATCCAGAACAA
GGACAGGCCTGGAAAGACCAACGTATCAAACCTTCAGGAGCATTATGCGC
AGAAAGATTACCAAACTGAATGACTTTTGAAACGTCGACTGAGGTGAGTT
TTAGGTGTTAATTTTCAAAACAAAATTCAAATAGTAGCTTGAATTCTAAG
TCTTCTCAGGAATGGTTCGGTAAAAATTTCATTTTTTTATTAGATGTCCT
ATCGAATTCTCCCTTTAAAAAGACACACAGAGATATAAACTTTTAAACTA
GCAATTAGCTGTCGCTATGAATGCCCCGCTGATAGCAGATATTAGCTTAG
AGGAATTTAGCCATGAAGAGAGCAAGGGAATCATAATCAGACTGTAAATT
GGTGAAATGAGTCTTCATAGAAAGTGCTCAATGTTACTAGAGCTGTTTAA
AGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNATGCAAAGTGACCTGAATAAAACCATTACTGTACAGGTTTCGCAA
CATGTTAAGAACTAGAATGATATCAAAGTTGATTTTCTTCAATCACCAGA
TAAAAATATTTGGAAAACCCAAACATAAGAATGTGTACTGTGAAACTGAA
AGTGCTTCCCTCCCAAAGAAAACATAATGCAGATTAAGGGTGAATTCCAA
AATGAAATTGAATGCATTCATTTGATTTGAAATTTAAAAAGTAAGTAACT
TTGGACTGGTGGCATACTGTAGATATAATCTATTTGTANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNTTGAATTACTTCCAGCTTATCAGGTTTTGGTGTT
GGTGCAATGTTCCTAGGTAGATTAGGGATTATTGGAGTTGGCAAGGTCTT
CTTTGAGTGAGCTAGTTGCACTGTCTCTTTTACCATATTATGCAGATAGG
TGCGATCTTTTTCCTCCTTGATTGATTTAGCTGTCCAGTTATTAGTGATC
TTGGACGATATGATGTCAAAGCGATCATTTCCATCTTTCGTTTTTGCTTG
TCCGAGTTCACTCCCTTGATTAAAGTCCATGATTGCTAACTGACTTCTTG
CAAACATTCCAGAATATGAGAAATGCTGTCTTTTAGGTGCCCAACGGTTA
TAAAGAGAGTGATAAACCTCTAAGATACCTGTATGACTGAATTTTGTAAG
AAATTTCAATTCTGAAAGCAACTTAGGTTCGAGAAGAATACTTTGTAGAA
CCGTGAATGCTTCTGTGTTTGGTTTTATCCATTCTTTGGCTTTCTGTTCC
TTCTTAGTGAGCCTGTAGTTTGAACATTTCCTGAACTTTTTACACCCAGT
CCAGCGGTGTTTATTTTGCACTTGAAAGATGACGCTGGTCCATTTTTCAC
GCAATAGCTCTTCATCACCTTCACAAGTAGCACAACACCAACAAAGATGG
TTACCGATTGACTTGATCCATTTTTCAATGATTTTGCAAGAAGCCTTTTT
CGCTGCGGCACGTAAATGCTTCTTTAGGCTCTTGACAAAATGCCAAATGT
CAAACTGGTGAATCATTTCAGTTTCGTGCTCGCGCATTTGTTTTCGAATA
CCTTTGTGGCGGTCGGTGGTCACTTGTTTTGGGGTGATACCTTTTGATTT
GACTTTTGACATCACCTTTTTGAATCCTTCTTTTTCCATTCTATTTGAAT
TTCCCATCTCTGTAACTTGCGTTAAAGAAAATTCAAAAATCTTGTTCGTA
ATTTTATCCAAAAAAGAATAAGTCAAATACTTTGCATTGTGCCCTGGGCT
GTCACATCTGCCATCGCCACAGAAGCTATAATCGCCATGCTTCTTTATGT
CTTCGTAAACCTTTTTAGACTGTTCCTCGTAATTCTTATTAACGACTCCA
AACAAAAAACGTTTTTGAATTGCATAAAACGCGGTCTTGGATAACCACTG
GATACCTGCCAAATCAAAAAACGTAGCGATCCTCTTAAACGTATTGGCAC
TTAACAGGACAGAAGCTGCGCTTGCCAGATTTACTTCTGAATAATGGCTG
CAATTAGGCTGAGATCTCCAGGTCATGTAATGAGCAGCAGGGCATTTCAT
TCTGATTATCAATTGACTTCCTTTGTAAACTATTTTGGTGATTGTTGTTG
TTAAAATACAGGCAGGGTAAAGACAACGCTTTAACAAAAGAAGCAACGAT
ACCCAGTAAACAATGAAGGCACTTTTAGACGGGGCATCAACGGACACTTC
TTCAAAATATTCGGTGTCGATCCCGATAACACTCTCGTAATCTTCGTCAT
CAGATTTGTCGTCTATATCTGACTCGCCAGATGACAGCAAAGGCATTTCG
GGTACGTGTGTTGGTGGGTCTGTCAATTCATTCAGTAGTGTAGGTCTATC
AGTAAGTTCATTTTCCATTTTGCATTGGACTCCAACATTTCGAGTTTCAG
CTCTCATCGATTCCGTTTGGGTTTCCTTTGTATTCAATTGACACTCGAAG
CTTTGAACTAGCTTGTGATGTTGGATGGCTCCTTCACAGACCTGACGTTT
AGCCTTTTCTTGCGCTCTCCTTTCACTCGACTTTCGTTTAGATGGTTGTT
TGTCTCTGTTATGATCGAACAAAGTTGGTATAGCGTCTTCCCTCAGCAGT
CTACGCGGTGCAAGTCCAAGGAGTTCGTGCTAAAAATGAACCAATTTTAA
GCTTTACAGCTACAAACAAATTTTCCAGAAAAACAAATAAAAAAGGACTC
TCACTACAGTAGTTACCACTGAGTGAGACAGAGTTATCAGGCATTAGTAA
ACGATGTACAATAAGTCATGCTTACTTGTAAATCTCTCTTGAAACAATCA
TCCTCGAAATGTAAGTGACACAGTTTCATGCTTTTCGTGGGGTTTTCTCG
CTTTATATTTTGCAACCACCTCCTCTTGAGTGTTTCATCCTTAGGTAGAT
TGTACAATGACACTTTTGCTCTTCCTTGTACATATGAGTTGTTAGTACAG
TTCACTGCACCGCACCAAGGCATGGTGGAAAGAATGTAAATTTCACGTGT
CTGGGATCGAATCTTAAATCAACTTCACTTGGAAAACAGTCCAAACTAAC
TATAAAAATGGGTTAAAACTAATTTTATATCGTTGAATTTTCGTTTCTCT
TTTTTCTCATTTTTTCTCTGAACAGCCTCCGTGACGTCACATACACAAAG
TTGCTTTTAAAAAGGGGCTTTCTGTAAACAAAAGAATTGGACTACATTAA
ATAAAAAACATTTTTTTAGTTAAATCAAGCATTCCTGATTTATTAAAACC
AACAAAATAAAAATATGAGGAGTCAAAATTTTACCGAACCATTCCTTAGA
GTTAGTTGTTGTGTCTAGTAGCATAAAACTTCGTGAAAAGTCATGTACTT
TTTTGAACAGACATTTAAGAGTAACAGGACATCAGTGTTGGATGAGAGAT
TTTATGATTTTGTTTGAGAGTTTAACATATTCGTTGTTGGTAACTCGTAG
CAGGGAGGTCTTAAACCCCTCCGCTATTAAATAGTTTATGTAATTCGAAT
CTCTCTGTAATTCGAAGAAAATTCTTGGTCCCTTGAAGATCGAATTAGAG
AGTTTCAACTATACTTGAAATTTGCATGTAATTTTATATCGATAAATAAA
CAATTTACAGGTACCTGTAAATAAGAATCTCTTTCGCTCAATTCAAAAAG
GTATATTTTCAATTACTGAAAAGTGTGATTGAATTTTTAGAGTAATTGTA
AGAAAATTAAAGTATGGCAGAAAACCCTGAACAACCCCCACCACTAGAAC
GCGGATACGACTTTGTGCTGGTAGTGAAAGAACAAGGGGTGGATTTCGAA
TGTTCTATTTGTCGATCGATTCTCCGTGACGCACACTCCACACCGTGCCA
TCATGCTTTTTGTCGTAATTGTTTGGCTACTTGGACCAAAGAGCTGGAAC
AAGGGAACAGGTAAGCACTTTCACTCATTCTATGTTATCTTACTTTGCTA
GCCTTAAAAAGTTTTTCTTTCTGATATTATAAAAGCATTTCGATCTAGAT
GAACTTAGTTTTCTCAAATTAAAATTAGAGAATTACAAACAACACAGCTA
AAAAAGCCTGCCACAAAATTATAGACTCGATTAGTGTATAGACTGCAGTG
TCTCTTTTAATTCTAAACTCTATAAATCAAACGCCTCCTGAACTCGAAAA
GTTTTCTAAGCCCTTCAGTTAACATTGCCCTATAAACCTTACTCCATAAC
TCAAACTCCACTGTATATCTTCTACTTTATAGACCAATCACTTGTCCCAA
TTGCAATTTGATCTTTGACCCTAAAAAGGTGTGTATTATAAAGACAAATA
AGACAGACAGACAGACATGGTCAAAGCAAAGATTCAATAACATCGATCAA
CATCAAATAATTTCATTCTTAGGTCCAATACAATGGATTTGTAGATCGAA
TGGTGAAAACCAGTCTAGAGATCAAATGTAAACAAGAGGATAAGGGATGT
CACTGGCAAGGAGAAATCATCGACTATCAGGTCCCAAGATTATTTCTATA
CTGCAATATCTTAACTGTAAAATGAAAGGCCCAAAAATCCAAGTTAAATT
TAAAAAATGAAACAGGTCGAATATTTTGCCACCTTTTCTTATAGATCCAG
AATTACAAAGAATTTTAAAATCAAGTCTCCTAAGAATTACTACCACGACT
GAAGGTCTAAGACTACCAGGTCACCAGCATCAACTTTGCATTTTAGGATC
ACCAAGGCACGTGTGATTACGAGTTGGTCGAATGTCAAAACAAAGGATGT
CGGGAAGTATTGTCGAGAAAAGAATTGGTGCAACATCAAAAGGATTGTAA
ATATCGAACGACTGAATGCCTCTATTGTAGGCTGATAAAGCCAATAATTG
AAATGAAGGTATATAATTGAACACTAGTCTCAACTGAGACATTTTGGGTC
GATTTTTTACATGAATGGGCTAGTAATCTAGGAAGTTATGAAAATCTCTC
GATTGTTTTAAGGGGTTCCCAACCAGCCAGTTCGGCTGTTTATAGCCTTC
CTTAACAGTACATTGGAAGTAGGAATCTCAGAAAATTCCACGCTGTCTCT
GTCATCACGCACGGTATATCCAGCGGGAGGAGTCTGCAAGGAGATCAAAC
CACGAAGTAACTGTAGGTATAATCTTTCTTACAATCCTAACCATGGATCA
AATGTATTGAAATTGAAAAGAGAACGCTTTTTAACAGGACCACCATTCCG
AATGCCAGATGATGAAAATTATTTGCCCAAATGAACAATGTGAAACTCAA
GTGCTGCGCAAAGATGTAAGAGTTTTACCAAAAGGATTTCAAACAATTTG
GTTCTCACTTTGGATATTCTTAAATTCAAAGCTTTCGTCTTGTTAATTTA
GGGCTATCAACCAACTTGAAAATGGATGAACTCCTACTTCGTAAGGATAT
GAGCCGTTCTTCAATGGGAACAGCTCGTATCGTATCATATAATCAAATAT
GAAATGAAACATTTCTTGGAAACTGTTTTTCACACCTACTCCACGCCTTT
CTTTTCTACAGATCAAAGAGCATTTGAACAAAGATTGCCTTTATGAGAAA
ATTTCATGCTGCTATTCTGAGATTGGTTGCCAGAAAAAGGTTAGAAATAA
TAGTACGTAAGTCAACTCTTTCCGAAATTTTTTAATTNAAAAAGGTTAGA
ATATAATAGTACATAACTCAACTCTTTCCGAAATTTTTTAATTGCGAACA
GCACAGAAAATGAAAATTTCTCCAGACCAATTTCGTCCTAAAATATATTT
TCCCAAATCTTAGATTTTTTGCACCTCACATCCAAGTTAGCCACTACATT
GACATTGCATTTCCAGAGCTTGAAGCTTTATTGACTGAATCATGCAATTG
AAGAAATGTTTTCCTTCTTCGAGGTGGAACGTTGTTTGATGGCTATCCAT
CAGAAAGATTTCCTTGTGGAACATCAAATGATGATTTTCCAAGACAACAA
GAAAGTCCAGCAATCACTTCTGGAGAAAAATAAACAACTGGAAGATGATT
TGAAGGCGGAAAAGAAAAAGAACGAGAAATTGAAGGGAGAAATGGAAGTG
ATCAAAAAGAAAGTTGAAAATTTGGAACAAGAACAACAAAGATGCAATGA
ACTTCACCGAAACATCTTTTCAATCATTGATACGCTCATTTATTGGGTAT
CAAAAGGCTTCAAAAGCAAAGAGAAGGTCATCAAAGTTTTGGGGAAAATC
CAATTGTCTCATCTCATAAAGGGGCAATATAATTTACTTGGACGGATTGT
CCCGTCNTTGTCTCATCTCATAAAGGGACAATATAATTTACTTGGACGGA
TTGTCCCGTCAACTCCTTTCAAATTCATGTCATTCTTCAGCACAACTTTT
GTCAACGAAAAATACAAATGTTTTGAGCTTAAGGGTAAAGAAAAGAGTTT
TAGCCGAATCATTTTCAAACATGTTCTACGTGACATGAAATTCAATCAAA
TGTATCAGACAGGTTCATTTGTCATGGTCAAAATAAGATTATTTCTCATT
GAGAGAGAATACAAAGTCAAGTACGTGGATAAAAAAGAATTTACAGAATT
GAGTAGACAAGCCAACGATTTCAGAAATAACAACGTGGTCTTCAGTTTTC
AAGGAAATCGAACAATCTTTTTATACCACCCAGATATTTCATCCATGAAT
GTAAAAATCTGTGTTATCAGAAATAGCCGGTTGACAAGTGAAACATTTGC
ATTAAACGATGAATCCTGTGCAGGCGATTTCGCCGATTGTTGCCTTGAAC
ATATCGATGGGAATGAATTTCAATTTAACTGCCATAATGCTGAAAAACAG
TTTATCTTACTGGTACTTTATACATAACATTTTGTGCTCTCATCAGCTCG
ACATTTTGGAGTAAAAAGGAAAATTTCGTGTGCACACTTAAGGTCCATGG
AGGATTACATCATCGAAAAAACACTTTTGCGTCAATTTATTTAATTATTC
TATCAAGTAGTATTCTAGAGGTACTGTCATTGACAATCGACGGTTCAGAT
CATTACTGAAATTTTGCCGGAAATTTTACCATAATTAATTGACAACCAGG
ATAGAAACAACTTAAGGCTTTCAGTTAGCAGGTTTATAAACTCTATTATT
TCTGGTCACGGGATCAATATCGATGGGCATCTACAGTCGTTTTGCTGGTT
GACGTCGCATTGTCATTCCACTGCAACGACCTCCCAAATATTATTGACGA
AATTTACCTGATACCAAATATTTTTTTGTAATTAATTTGTAATTAAACTG
AACGATGAAATAGCTTTTGAAACATACCTGGTACTCGGTGAGGTAGAATC
CTTTGACGACTCCTTCATCGATGATACCCAAATAAACTGTCCCTCCTCGA
CCAGAGTTCAGAAATGCATTCAACGCCCTGTACAAAAATATAAATAAAAT
GTTGAGTCATTCTTGTCCATTTAATGGCATGTACATAACTAACAAAATCT
AGAAAATTTCTAGTGATTAAAAAATATCCTTTCACCCTTTTGCCTGTTGA
ACAGATCATGATAAGCAGATATTGCATGGCCTTTTTCAGGTATTGCGATT
TATTAGCTCGAGGTTAGATGTCAACAAAGCCAAGTGGATTTGAATATCAT
TTGAGAGTTAATAAATCCAATATCTGATAAAAGCAGACATCATTATTGTA
CCATACAGG

Coding sequence (CDS) from alignment at sc0000667:81019..92177-

>TCONS_00028176 ID=TCONS_00028176|Name=TCONS_00028176|organism=Clytia hemisphaerica|type=CDS|length=11361bp|location=Sequence derived from alignment at sc0000667:81019..92177- (Clytia hemisphaerica)
GTGGAACGTTGTTTGATGGCTATCCATCAGAAAGATTTCCTTGTGGAACA
TCAAATGATGATTTTCCAAGACAACAAGAAAGTCCAGCAATCACTTCTGG
AGAAAAATAAACAACTGGAAGATGATTTGAAGGCGGAAAAGAAAAAGAAC
GAGAAATTGAAGGGAGAAATGGAAGTGATCAAAAAGAAAGTTGAAAATTT
GGAACAAGAACAACAAAGATGCAATGAACTTCACCGAAACATCTTTTCAA
TCATTGATACGCTCATTTATTGGGTATCAAAAGGCTTCAAAAGCAAAGAG
AAGGTCATCAAAGTTTTGGGGAAAATCCAATTGTCTCATCTCATAAAGGG
GCAATATAATTTACTTGGACGGATTGTCCCGTCNTTGTCTCATCTCATAA
AGGGACAATATAATTTACTTGGACGGATTGTCCCGTCAACTCCTTTCAAA
TTCATGTCATTCTTCAGCACAACTTTTGTCAACGAAAAATACAAATGTTT
TGAGCTTAAGGGTAAAGAAAAGAGTTTTAGCCGAATCATTTTCAAACATG
TTCTACGTGACATGAAATTCAATCAAATGTATCAGACAGGTTCATTTGTC
ATGGTCAAAATAAGATTATTTCTCATTGAGAGAGAATACAAAGTCAAGTA
CGTGGATAAAAAAGAATTTACAGAATTGAGTAGACAAGCCAACGATTTCA
GAAATAACAACGTGGTCTTCAGTTTTCAAGGAAATCGAACAATCTTTTTA
TACCACCCAGATATTTCATCCATGAATGTAAAAATCTGTGTTATCAGAAA
TAGCCGGTTGACAAGTGAAACATTTGCATTAAACGATGAATCCTGTGCAG
GCGATTTCGCCGATTGTTGCCTTGAACATATCGATGGGAATGAATTTCAA
TTTAACTGCCATAATGCTGAAAAACAGTTTATCTTACTGGTACTTTATAC
ATAAATCAAAGAGCATTTGAACAAAGATTGCCTTTATGAGAAAATTTCAT
GCTGCTATTCTGAGATTGGTTGCCAGAAAAAGGACCACCATTCCGAATGC
CAGATGATGAAAATTATTTGCCCAAATGAACAATGTGAAACTCAAGTGCT
GCGCAAAGATGATCACCAAGGCACGTGTGATTACGAGTTGGTCGAATGTC
AAAACAAAGGATGTCGGGAAGTATTGTCGAGAAAAGAATTGGTGCAACAT
CAAAAGGATTGTAAATATCGAACGACTGAATGCCTCTATTGTAGGCTGAT
AAAGCCAATAATTGAAATGAAGGTCCAATACAATGGATTTGTAGATCGAA
TGGTGAAAACCAGTCTAGAGATCAAATGTAAACAAGAGGATAAGGGATGT
CACTGGCAAGGAGAAATCATCGACTATCAGACCAATCACTTGTCCCAATT
GCAATTTGATCTTTGACCCTAAAAAGATGGCAGAAAACCCTGAACAACCC
CCACCACTAGAACGCGGATACGACTTTGTGCTGGTAGTGAAAGAACAAGG
GGTGGATTTCGAATGTTCTATTTGTCGATCGATTCTCCGTGACGCACACT
CCACACCGTGCCATCATGCTTTTTGTCGTAATTGTTTGGCTACTTGGACC
AAAGAGCTGGAACAAGGGAACAGGTGGAACGTTGTTTGATGGCTATCCAT
CAGAAAGATTTCCTTGTGGAACATCAAATGATGATTTTCCAAGACAACAA
GAAAGTCCAGCAATCACTTCTGGAGAAAAATAAACAACTGGAAGATGATT
TGAAGGCGGAAAAGAAAAAGAACGAGAAATTGAAGGGAGAAATGGAAGTG
ATCAAAAAGAAAGTTGAAAATTTGGAACAAGAACAACAAAGATGCAATGA
ACTTCACCGAAACATCTTTTCAATCATTGATACGCTCATTTATTGGGTAT
CAAAAGGCTTCAAAAGCAAAGAGAAGGTCATCAAAGTTTTGGGGAAAATC
CAATTGTCTCATCTCATAAAGGGGCAATATAATTTACTTGGACGGATTGT
CCCGTCNTTGTCTCATCTCATAAAGGGACAATATAATTTACTTGGACGGA
TTGTCCCGTCAACTCCTTTCAAATTCATGTCATTCTTCAGCACAACTTTT
GTCAACGAAAAATACAAATGTTTTGAGCTTAAGGGTAAAGAAAAGAGTTT
TAGCCGAATCATTTTCAAACATGTTCTACGTGACATGAAATTCAATCAAA
TGTATCAGACAGGTTCATTTGTCATGGTCAAAATAAGATTATTTCTCATT
GAGAGAGAATACAAAGTCAAGTACGTGGATAAAAAAGAATTTACAGAATT
GAGTAGACAAGCCAACGATTTCAGAAATAACAACGTGGTCTTCAGTTTTC
AAGGAAATCGAACAATCTTTTTATACCACCCAGATATTTCATCCATGAAT
GTAAAAATCTGTGTTATCAGAAATAGCCGGTTGACAAGTGAAACATTTGC
ATTAAACGATGAATCCTGTGCAGGCGATTTCGCCGATTGTTGCCTTGAAC
ATATCGATGGGAATGAATTTCAATTTAACTGCCATAATGCTGAAAAACAG
TTTATCTTACTGGTACTTTATACATAAATCAAAGAGCATTTGAACAAAGA
TTGCCTTTATGAGAAAATTTCATGCTGCTATTCTGAGATTGGTTGCCAGA
AAAAGGACCACCATTCCGAATGCCAGATGATGAAAATTATTTGCCCAAAT
GAACAATGTGAAACTCAAGTGCTGCGCAAAGATGATCACCAAGGCACGTG
TGATTACGAGTTGGTCGAATGTCAAAACAAAGGATGTCGGGAAGTATTGT
CGAGAAAAGAATTGGTGCAACATCAAAAGGATTGTAAATATCGAACGACT
GAATGCCTCTATTGTAGGCTGATAAAGCCAATAATTGAAATGAAGGTCCA
ATACAATGGATTTGTAGATCGAATGGTGAAAACCAGTCTAGAGATCAAAT
GTAAACAAGAGGATAAGGGATGTCACTGGCAAGGAGAAATCATCGACTAT
CAGACCAATCACTTGTCCCAATTGCAATTTGATCTTTGACCCTAAAAAGA
TGGCAGAAAACCCTGAACAACCCCCACCACTAGAACGCGGATACGACTTT
GTGCTGGTAGTGAAAGAACAAGGGGTGGATTTCGAATGTTCTATTTGTCG
ATCGATTCTCCGTGACGCACACTCCACACCGTGCCATCATGCTTTTTGTC
GTAATTGTTTGGCTACTTGGACCAAAGAGCTGGAACAAGGGAACAGGTGG
AACGTTGTTTGATGGCTATCCATCAGAAAGATTTCCTTGTGGAACATCAA
ATGATGATTTTCCAAGACAACAAGAAAGTCCAGCAATCACTTCTGGAGAA
AAATAAACAACTGGAAGATGATTTGAAGGCGGAAAAGAAAAAGAACGAGA
AATTGAAGGGAGAAATGGAAGTGATCAAAAAGAAAGTTGAAAATTTGGAA
CAAGAACAACAAAGATGCAATGAACTTCACCGAAACATCTTTTCAATCAT
TGATACGCTCATTTATTGGGTATCAAAAGGCTTCAAAAGCAAAGAGAAGG
TCATCAAAGTTTTGGGGAAAATCCAATTGTCTCATCTCATAAAGGGGCAA
TATAATTTACTTGGACGGATTGTCCCGTCNTTGTCTCATCTCATAAAGGG
ACAATATAATTTACTTGGACGGATTGTCCCGTCAACTCCTTTCAAATTCA
TGTCATTCTTCAGCACAACTTTTGTCAACGAAAAATACAAATGTTTTGAG
CTTAAGGGTAAAGAAAAGAGTTTTAGCCGAATCATTTTCAAACATGTTCT
ACGTGACATGAAATTCAATCAAATGTATCAGACAGGTTCATTTGTCATGG
TCAAAATAAGATTATTTCTCATTGAGAGAGAATACAAAGTCAAGTACGTG
GATAAAAAAGAATTTACAGAATTGAGTAGACAAGCCAACGATTTCAGAAA
TAACAACGTGGTCTTCAGTTTTCAAGGAAATCGAACAATCTTTTTATACC
ACCCAGATATTTCATCCATGAATGTAAAAATCTGTGTTATCAGAAATAGC
CGGTTGACAAGTGAAACATTTGCATTAAACGATGAATCCTGTGCAGGCGA
TTTCGCCGATTGTTGCCTTGAACATATCGATGGGAATGAATTTCAATTTA
ACTGCCATAATGCTGAAAAACAGTTTATCTTACTGGTACTTTATACATAA
ATCAAAGAGCATTTGAACAAAGATTGCCTTTATGAGAAAATTTCATGCTG
CTATTCTGAGATTGGTTGCCAGAAAAAGGACCACCATTCCGAATGCCAGA
TGATGAAAATTATTTGCCCAAATGAACAATGTGAAACTCAAGTGCTGCGC
AAAGATGATCACCAAGGCACGTGTGATTACGAGTTGGTCGAATGTCAAAA
CAAAGGATGTCGGGAAGTATTGTCGAGAAAAGAATTGGTGCAACATCAAA
AGGATTGTAAATATCGAACGACTGAATGCCTCTATTGTAGGCTGATAAAG
CCAATAATTGAAATGAAGGTCCAATACAATGGATTTGTAGATCGAATGGT
GAAAACCAGTCTAGAGATCAAATGTAAACAAGAGGATAAGGGATGTCACT
GGCAAGGAGAAATCATCGACTATCAGACCAATCACTTGTCCCAATTGCAA
TTTGATCTTTGACCCTAAAAAGATGGCAGAAAACCCTGAACAACCCCCAC
CACTAGAACGCGGATACGACTTTGTGCTGGTAGTGAAAGAACAAGGGGTG
GATTTCGAATGTTCTATTTGTCGATCGATTCTCCGTGACGCACACTCCAC
ACCGTGCCATCATGCTTTTTGTCGTAATTGTTTGGCTACTTGGACCAAAG
AGCTGGAACAAGGGAACAGGTGGAACGTTGTTTGATGGCTATCCATCAGA
AAGATTTCCTTGTGGAACATCAAATGATGATTTTCCAAGACAACAAGAAA
GTCCAGCAATCACTTCTGGAGAAAAATAAACAACTGGAAGATGATTTGAA
GGCGGAAAAGAAAAAGAACGAGAAATTGAAGGGAGAAATGGAAGTGATCA
AAAAGAAAGTTGAAAATTTGGAACAAGAACAACAAAGATGCAATGAACTT
CACCGAAACATCTTTTCAATCATTGATACGCTCATTTATTGGGTATCAAA
AGGCTTCAAAAGCAAAGAGAAGGTCATCAAAGTTTTGGGGAAAATCCAAT
TGTCTCATCTCATAAAGGGGCAATATAATTTACTTGGACGGATTGTCCCG
TCNTTGTCTCATCTCATAAAGGGACAATATAATTTACTTGGACGGATTGT
CCCGTCAACTCCTTTCAAATTCATGTCATTCTTCAGCACAACTTTTGTCA
ACGAAAAATACAAATGTTTTGAGCTTAAGGGTAAAGAAAAGAGTTTTAGC
CGAATCATTTTCAAACATGTTCTACGTGACATGAAATTCAATCAAATGTA
TCAGACAGGTTCATTTGTCATGGTCAAAATAAGATTATTTCTCATTGAGA
GAGAATACAAAGTCAAGTACGTGGATAAAAAAGAATTTACAGAATTGAGT
AGACAAGCCAACGATTTCAGAAATAACAACGTGGTCTTCAGTTTTCAAGG
AAATCGAACAATCTTTTTATACCACCCAGATATTTCATCCATGAATGTAA
AAATCTGTGTTATCAGAAATAGCCGGTTGACAAGTGAAACATTTGCATTA
AACGATGAATCCTGTGCAGGCGATTTCGCCGATTGTTGCCTTGAACATAT
CGATGGGAATGAATTTCAATTTAACTGCCATAATGCTGAAAAACAGTTTA
TCTTACTGGTACTTTATACATAAATCAAAGAGCATTTGAACAAAGATTGC
CTTTATGAGAAAATTTCATGCTGCTATTCTGAGATTGGTTGCCAGAAAAA
GGACCACCATTCCGAATGCCAGATGATGAAAATTATTTGCCCAAATGAAC
AATGTGAAACTCAAGTGCTGCGCAAAGATGATCACCAAGGCACGTGTGAT
TACGAGTTGGTCGAATGTCAAAACAAAGGATGTCGGGAAGTATTGTCGAG
AAAAGAATTGGTGCAACATCAAAAGGATTGTAAATATCGAACGACTGAAT
GCCTCTATTGTAGGCTGATAAAGCCAATAATTGAAATGAAGGTCCAATAC
AATGGATTTGTAGATCGAATGGTGAAAACCAGTCTAGAGATCAAATGTAA
ACAAGAGGATAAGGGATGTCACTGGCAAGGAGAAATCATCGACTATCAGA
CCAATCACTTGTCCCAATTGCAATTTGATCTTTGACCCTAAAAAGATGGC
AGAAAACCCTGAACAACCCCCACCACTAGAACGCGGATACGACTTTGTGC
TGGTAGTGAAAGAACAAGGGGTGGATTTCGAATGTTCTATTTGTCGATCG
ATTCTCCGTGACGCACACTCCACACCGTGCCATCATGCTTTTTGTCGTAA
TTGTTTGGCTACTTGGACCAAAGAGCTGGAACAAGGGAACAGGTGGAACG
TTGTTTGATGGCTATCCATCAGAAAGATTTCCTTGTGGAACATCAAATGA
TGATTTTCCAAGACAACAAGAAAGTCCAGCAATCACTTCTGGAGAAAAAT
AAACAACTGGAAGATGATTTGAAGGCGGAAAAGAAAAAGAACGAGAAATT
GAAGGGAGAAATGGAAGTGATCAAAAAGAAAGTTGAAAATTTGGAACAAG
AACAACAAAGATGCAATGAACTTCACCGAAACATCTTTTCAATCATTGAT
ACGCTCATTTATTGGGTATCAAAAGGCTTCAAAAGCAAAGAGAAGGTCAT
CAAAGTTTTGGGGAAAATCCAATTGTCTCATCTCATAAAGGGGCAATATA
ATTTACTTGGACGGATTGTCCCGTCNTTGTCTCATCTCATAAAGGGACAA
TATAATTTACTTGGACGGATTGTCCCGTCAACTCCTTTCAAATTCATGTC
ATTCTTCAGCACAACTTTTGTCAACGAAAAATACAAATGTTTTGAGCTTA
AGGGTAAAGAAAAGAGTTTTAGCCGAATCATTTTCAAACATGTTCTACGT
GACATGAAATTCAATCAAATGTATCAGACAGGTTCATTTGTCATGGTCAA
AATAAGATTATTTCTCATTGAGAGAGAATACAAAGTCAAGTACGTGGATA
AAAAAGAATTTACAGAATTGAGTAGACAAGCCAACGATTTCAGAAATAAC
AACGTGGTCTTCAGTTTTCAAGGAAATCGAACAATCTTTTTATACCACCC
AGATATTTCATCCATGAATGTAAAAATCTGTGTTATCAGAAATAGCCGGT
TGACAAGTGAAACATTTGCATTAAACGATGAATCCTGTGCAGGCGATTTC
GCCGATTGTTGCCTTGAACATATCGATGGGAATGAATTTCAATTTAACTG
CCATAATGCTGAAAAACAGTTTATCTTACTGGTACTTTATACATAAATCA
AAGAGCATTTGAACAAAGATTGCCTTTATGAGAAAATTTCATGCTGCTAT
TCTGAGATTGGTTGCCAGAAAAAGGACCACCATTCCGAATGCCAGATGAT
GAAAATTATTTGCCCAAATGAACAATGTGAAACTCAAGTGCTGCGCAAAG
ATGATCACCAAGGCACGTGTGATTACGAGTTGGTCGAATGTCAAAACAAA
GGATGTCGGGAAGTATTGTCGAGAAAAGAATTGGTGCAACATCAAAAGGA
TTGTAAATATCGAACGACTGAATGCCTCTATTGTAGGCTGATAAAGCCAA
TAATTGAAATGAAGGTCCAATACAATGGATTTGTAGATCGAATGGTGAAA
ACCAGTCTAGAGATCAAATGTAAACAAGAGGATAAGGGATGTCACTGGCA
AGGAGAAATCATCGACTATCAGACCAATCACTTGTCCCAATTGCAATTTG
ATCTTTGACCCTAAAAAGATGGCAGAAAACCCTGAACAACCCCCACCACT
AGAACGCGGATACGACTTTGTGCTGGTAGTGAAAGAACAAGGGGTGGATT
TCGAATGTTCTATTTGTCGATCGATTCTCCGTGACGCACACTCCACACCG
TGCCATCATGCTTTTTGTCGTAATTGTTTGGCTACTTGGACCAAAGAGCT
GGAACAAGGGAACAGGTGGAACGTTGTTTGATGGCTATCCATCAGAAAGA
TTTCCTTGTGGAACATCAAATGATGATTTTCCAAGACAACAAGAAAGTCC
AGCAATCACTTCTGGAGAAAAATAAACAACTGGAAGATGATTTGAAGGCG
GAAAAGAAAAAGAACGAGAAATTGAAGGGAGAAATGGAAGTGATCAAAAA
GAAAGTTGAAAATTTGGAACAAGAACAACAAAGATGCAATGAACTTCACC
GAAACATCTTTTCAATCATTGATACGCTCATTTATTGGGTATCAAAAGGC
TTCAAAAGCAAAGAGAAGGTCATCAAAGTTTTGGGGAAAATCCAATTGTC
TCATCTCATAAAGGGGCAATATAATTTACTTGGACGGATTGTCCCGTCNT
TGTCTCATCTCATAAAGGGACAATATAATTTACTTGGACGGATTGTCCCG
TCAACTCCTTTCAAATTCATGTCATTCTTCAGCACAACTTTTGTCAACGA
AAAATACAAATGTTTTGAGCTTAAGGGTAAAGAAAAGAGTTTTAGCCGAA
TCATTTTCAAACATGTTCTACGTGACATGAAATTCAATCAAATGTATCAG
ACAGGTTCATTTGTCATGGTCAAAATAAGATTATTTCTCATTGAGAGAGA
ATACAAAGTCAAGTACGTGGATAAAAAAGAATTTACAGAATTGAGTAGAC
AAGCCAACGATTTCAGAAATAACAACGTGGTCTTCAGTTTTCAAGGAAAT
CGAACAATCTTTTTATACCACCCAGATATTTCATCCATGAATGTAAAAAT
CTGTGTTATCAGAAATAGCCGGTTGACAAGTGAAACATTTGCATTAAACG
ATGAATCCTGTGCAGGCGATTTCGCCGATTGTTGCCTTGAACATATCGAT
GGGAATGAATTTCAATTTAACTGCCATAATGCTGAAAAACAGTTTATCTT
ACTGGTACTTTATACATAAATCAAAGAGCATTTGAACAAAGATTGCCTTT
ATGAGAAAATTTCATGCTGCTATTCTGAGATTGGTTGCCAGAAAAAGGAC
CACCATTCCGAATGCCAGATGATGAAAATTATTTGCCCAAATGAACAATG
TGAAACTCAAGTGCTGCGCAAAGATGATCACCAAGGCACGTGTGATTACG
AGTTGGTCGAATGTCAAAACAAAGGATGTCGGGAAGTATTGTCGAGAAAA
GAATTGGTGCAACATCAAAAGGATTGTAAATATCGAACGACTGAATGCCT
CTATTGTAGGCTGATAAAGCCAATAATTGAAATGAAGGTCCAATACAATG
GATTTGTAGATCGAATGGTGAAAACCAGTCTAGAGATCAAATGTAAACAA
GAGGATAAGGGATGTCACTGGCAAGGAGAAATCATCGACTATCAGACCAA
TCACTTGTCCCAATTGCAATTTGATCTTTGACCCTAAAAAGATGGCAGAA
AACCCTGAACAACCCCCACCACTAGAACGCGGATACGACTTTGTGCTGGT
AGTGAAAGAACAAGGGGTGGATTTCGAATGTTCTATTTGTCGATCGATTC
TCCGTGACGCACACTCCACACCGTGCCATCATGCTTTTTGTCGTAATTGT
TTGGCTACTTGGACCAAAGAGCTGGAACAAGGGAACAGGTGGAACGTTGT
TTGATGGCTATCCATCAGAAAGATTTCCTTGTGGAACATCAAATGATGAT
TTTCCAAGACAACAAGAAAGTCCAGCAATCACTTCTGGAGAAAAATAAAC
AACTGGAAGATGATTTGAAGGCGGAAAAGAAAAAGAACGAGAAATTGAAG
GGAGAAATGGAAGTGATCAAAAAGAAAGTTGAAAATTTGGAACAAGAACA
ACAAAGATGCAATGAACTTCACCGAAACATCTTTTCAATCATTGATACGC
TCATTTATTGGGTATCAAAAGGCTTCAAAAGCAAAGAGAAGGTCATCAAA
GTTTTGGGGAAAATCCAATTGTCTCATCTCATAAAGGGGCAATATAATTT
ACTTGGACGGATTGTCCCGTCNTTGTCTCATCTCATAAAGGGACAATATA
ATTTACTTGGACGGATTGTCCCGTCAACTCCTTTCAAATTCATGTCATTC
TTCAGCACAACTTTTGTCAACGAAAAATACAAATGTTTTGAGCTTAAGGG
TAAAGAAAAGAGTTTTAGCCGAATCATTTTCAAACATGTTCTACGTGACA
TGAAATTCAATCAAATGTATCAGACAGGTTCATTTGTCATGGTCAAAATA
AGATTATTTCTCATTGAGAGAGAATACAAAGTCAAGTACGTGGATAAAAA
AGAATTTACAGAATTGAGTAGACAAGCCAACGATTTCAGAAATAACAACG
TGGTCTTCAGTTTTCAAGGAAATCGAACAATCTTTTTATACCACCCAGAT
ATTTCATCCATGAATGTAAAAATCTGTGTTATCAGAAATAGCCGGTTGAC
AAGTGAAACATTTGCATTAAACGATGAATCCTGTGCAGGCGATTTCGCCG
ATTGTTGCCTTGAACATATCGATGGGAATGAATTTCAATTTAACTGCCAT
AATGCTGAAAAACAGTTTATCTTACTGGTACTTTATACATAAATCAAAGA
GCATTTGAACAAAGATTGCCTTTATGAGAAAATTTCATGCTGCTATTCTG
AGATTGGTTGCCAGAAAAAGGACCACCATTCCGAATGCCAGATGATGAAA
ATTATTTGCCCAAATGAACAATGTGAAACTCAAGTGCTGCGCAAAGATGA
TCACCAAGGCACGTGTGATTACGAGTTGGTCGAATGTCAAAACAAAGGAT
GTCGGGAAGTATTGTCGAGAAAAGAATTGGTGCAACATCAAAAGGATTGT
AAATATCGAACGACTGAATGCCTCTATTGTAGGCTGATAAAGCCAATAAT
TGAAATGAAGGTCCAATACAATGGATTTGTAGATCGAATGGTGAAAACCA
GTCTAGAGATCAAATGTAAACAAGAGGATAAGGGATGTCACTGGCAAGGA
GAAATCATCGACTATCAGACCAATCACTTGTCCCAATTGCAATTTGATCT
TTGACCCTAAAAAGATGGCAGAAAACCCTGAACAACCCCCACCACTAGAA
CGCGGATACGACTTTGTGCTGGTAGTGAAAGAACAAGGGGTGGATTTCGA
ATGTTCTATTTGTCGATCGATTCTCCGTGACGCACACTCCACACCGTGCC
ATCATGCTTTTTGTCGTAATTGTTTGGCTACTTGGACCAAAGAGCTGGAA
CAAGGGAACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015947XLOC_015947Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028176-proteinTCONS_00028176-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028176-exon-sc0000667-1575043694:91935..92177TCONS_00028176-exon-sc0000667-1575043694:91935..92177Clytia hemisphaericaexon
TCONS_00028176-exon-sc0000667-1575043694:84768..84987TCONS_00028176-exon-sc0000667-1575043694:84768..84987Clytia hemisphaericaexon
TCONS_00028176-exon-sc0000667-1575043694:84400..84445TCONS_00028176-exon-sc0000667-1575043694:84400..84445Clytia hemisphaericaexon
TCONS_00028176-exon-sc0000667-1575043694:84198..84305TCONS_00028176-exon-sc0000667-1575043694:84198..84305Clytia hemisphaericaexon
TCONS_00028176-exon-sc0000667-1575043694:83820..83981TCONS_00028176-exon-sc0000667-1575043694:83820..83981Clytia hemisphaericaexon
TCONS_00028176-exon-sc0000667-1575043694:83413..83490TCONS_00028176-exon-sc0000667-1575043694:83413..83490Clytia hemisphaericaexon
TCONS_00028176-exon-sc0000667-1575043694:83089..83166TCONS_00028176-exon-sc0000667-1575043694:83089..83166Clytia hemisphaericaexon
TCONS_00028176-exon-sc0000667-1575043694:81019..82804TCONS_00028176-exon-sc0000667-1575043694:81019..82804Clytia hemisphaericaexon
TCONS_00028176-exon-sc0000667-1510915933:91935..92177TCONS_00028176-exon-sc0000667-1510915933:91935..92177Clytia hemisphaericaexon
TCONS_00028176-exon-sc0000667-1510915933:84768..84987TCONS_00028176-exon-sc0000667-1510915933:84768..84987Clytia hemisphaericaexon
TCONS_00028176-exon-sc0000667-1510915933:84400..84445TCONS_00028176-exon-sc0000667-1510915933:84400..84445Clytia hemisphaericaexon
TCONS_00028176-exon-sc0000667-1510915933:84198..84305TCONS_00028176-exon-sc0000667-1510915933:84198..84305Clytia hemisphaericaexon
TCONS_00028176-exon-sc0000667-1510915933:83820..83981TCONS_00028176-exon-sc0000667-1510915933:83820..83981Clytia hemisphaericaexon
TCONS_00028176-exon-sc0000667-1510915933:83413..83490TCONS_00028176-exon-sc0000667-1510915933:83413..83490Clytia hemisphaericaexon
TCONS_00028176-exon-sc0000667-1510915933:83089..83166TCONS_00028176-exon-sc0000667-1510915933:83089..83166Clytia hemisphaericaexon
TCONS_00028176-exon-sc0000667-1510915933:81019..82804TCONS_00028176-exon-sc0000667-1510915933:81019..82804Clytia hemisphaericaexon
TCONS_00028176-exon-sc0000667-1491911889:91935..92177TCONS_00028176-exon-sc0000667-1491911889:91935..92177Clytia hemisphaericaexon
TCONS_00028176-exon-sc0000667-1491911889:84768..84987TCONS_00028176-exon-sc0000667-1491911889:84768..84987Clytia hemisphaericaexon
TCONS_00028176-exon-sc0000667-1491911889:84400..84445TCONS_00028176-exon-sc0000667-1491911889:84400..84445Clytia hemisphaericaexon
TCONS_00028176-exon-sc0000667-1491911889:84198..84305TCONS_00028176-exon-sc0000667-1491911889:84198..84305Clytia hemisphaericaexon
TCONS_00028176-exon-sc0000667-1491911889:83820..83981TCONS_00028176-exon-sc0000667-1491911889:83820..83981Clytia hemisphaericaexon
TCONS_00028176-exon-sc0000667-1491911889:83413..83490TCONS_00028176-exon-sc0000667-1491911889:83413..83490Clytia hemisphaericaexon
TCONS_00028176-exon-sc0000667-1491911889:83089..83166TCONS_00028176-exon-sc0000667-1491911889:83089..83166Clytia hemisphaericaexon
TCONS_00028176-exon-sc0000667-1491911889:81019..82804TCONS_00028176-exon-sc0000667-1491911889:81019..82804Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000667supercontigsc0000667:81019..92177 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.409576	0.165881	0.321244	0.314982	7.72985	5.54408	5.79492	5.71607	2.08275	2.7125	1.13772	1.72131	3.4839	2.88391	3.26199	4.28078	1.94558	2.86916	4.91587	3.37388	1.59278	1.71842	1.55458	1.50734	2.47032	2.2059	0.464781	0.475359	0.595679	0.730105
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR018957Znf_C3HC4_RING-type
IPR001293Znf_TRAF
IPR017907Znf_RING_CS
IPR008974TRAF-like
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0008270zinc ion binding
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Blast
[Close]
BLAST of TCONS_00028176 vs. Swiss-Prot (Human)
Match: TRAF5 (TNF receptor-associated factor 5 OS=Homo sapiens GN=TRAF5 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.365e-21
Identity = 70/249 (28.11%), Postives = 126/249 (50.60%), Query Frame = 3 
Query:  291 PPLERGYDFVLVVKEQGVDFECSICRSILRDAHSTPCHHAFCRNCLATWTKELEQGNRPITCPNCNLIFDPKKVQYNGFVDRMVKTSLEIKCKQEDKGCHWQGEIIDYQDHQGTCDYELVECQNKGCREVLSRKELVQH-QKDCKYRTTECLYCRLIKPIIEMKDHHSE-CQMMKIICPNEQCETQVLRKDIKEHLNKDCLYEKISCCYSEIGCQKKVERCLMAIHQKDFLVEHQMMIFQDNKKVQQSL 1031
            P +E  Y FV  ++E+   ++C+ C S+L + H T C H FC++C+ +    L + N    CP    +   ++V  +    R V  +L + C     GC+ +  +  YQDH   C ++ V+C N+ CRE + RK+L +H    C++R  +CLYC+    +I +++H    C    + CPN  C   +L+ ++ EHL   C   +  C +   GC    +R  +  H+   L EH  ++ + N ++++ +
Sbjct:   29 PSIE--YQFVERLEER---YKCAFCHSVLHNPHQTGCGHRFCQHCILS----LRELNTVPICPVDKEVIKSQEVFKDNCCKREV-LNLYVYCSNA-PGCNAKVILGRYQDHLQQCLFQPVQCSNEKCREPVLRKDLKEHLSASCQFRKEKCLYCKKDVVVINLQNHEENLCPEYPVFCPN-NCAKIILKTEVDEHL-AVCPEAEQDCPFKHYGCAVTDKRRNLQQHEHSALREHMRLVLEKNVQLEEQI 264
The following BLAST results are available for this feature:
BLAST of TCONS_00028176 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TRAF52.365e-2128.11TNF receptor-associated factor 5 OS=Homo sapiens G... [more]
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