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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028320 ID=TCONS_00028320|Name=TCONS_00028320|organism=Clytia hemisphaerica|type=transcript|length=1233bp
AAGCCAATAGTTTcacaatataaaaatataacttGCATTTTTATTCTTTA
CTATGTATTCGAGGGTTCATATTTCACTTAAAAGAGGCTGTATATATGAT
CAAGTTGACGAAAATtgccgacccccccccctttcttatTGAACCCCTAT
ATATTCCCATCCTTATAAGAAAATCTTGGTAACCCCTACAAAGACCCCCA
AAATTTGGGATCCCCTTTTTGATATGTATCCCATTTTGAGACATGTGCCT
TATTTGTTCTAGGAGCTGGACTCTTGCCCTTGGCAGGAGGGAGAGAAGTG
GTTGCTGCAAGGTTAAACTGCCTGTATTTACTTTATTTCCCTATATACCT
ACCTCcctttgcaatgaattttaGAAAATCTGTTTGAAGGTAACTCACTC
TAGGCACTACTTAAGTGATGAAAGTACAAATGATTAGTCGCAAGCCAACG
ATCTCACAATATTGCAATATACTTGATAATATAACTAGTGTTTAACATGA
TACACGTGTGTTTGGGTTGTATATACATATTTATACTTAAAAACAGACTG
AACATATTTGTATATGATTAAGTTGATCAAAGACACCGTTCTCCTTGTTA
ATTGACCCCCTAGTTTCCCAGCTAAATCTAGGCGTCCCCCTTTTACAAAG
GCCCTCTCAAAATTGGCATCCTCCATCGTGATAGAAAGGGGATGTGCAAA
GTATGTTGTTCTGGTGCCACAAAACATCTAAAGTTAGGTTCCTTACATAC
AGATTGAAATATAACACTCGGTTGAACCCAATGTAACTTGTAGCGAGTTG
TGTAGGCAGGCAAGGGACTGAGAAGGGCTTTATCGTAGTATATTATATAT
CAGTCTGAGAAAATGTATATTGCCAACATAGGGCTAACTTGTGAAAATTG
CGCAGCCGTGTCAAATGAGCTTAAAAAACTGTATCGGTTGAATGACAAGG
GTCCGAGAGAGCTAGGGATCAAGTAAGAAAATCTTAATTTCTTAGTACCT
TGTGAGTAGTTCTGCTTTGCCTTTGGTCAGGTTATTGATGACCCCGAAAA
TACTATCCCCATAAAATAAAATGGGCAACTGTAGGTGTTGGTAGCTCACC
TAACATTTTGAGGAGGTAAAGAATCCAAGTTTACAAACTCACCACGTTTG
ATGCAGTTGATAACATTGGCTGGAACTCTGGAACTGATAATTGTAACTTT
GAGAGTTTCAAGAGCAGCCATTTTGATCGTCTT Run BLAST on NCBI transcript from alignment at sc0000673:3538..4770 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028320 ID=TCONS_00028320|Name=TCONS_00028320|organism=Clytia hemisphaerica|type=transcript|length=1233bp|location=Sequence derived from alignment at sc0000673:3538..4770 (Clytia hemisphaerica)
AAGACGATCAAAATGGCTGCTCTTGAAACTCTCAAAGTTACAATTATCAG
TTCCAGAGTTCCAGCCAATGTTATCAACTGCATCAAACGTGGTGAGTTTG
TAAACTTGGATTCTTTACCTCCTCAAAATGTTAGGTGAGCTACCAACACC
TACAGTTGCCCATTTTATTTTATGGGGATAGTATTTTCGGGGTCATCAAT
AACCTGACCAAAGGCAAAGCAGAACTACTCACAAGGTACTAAGAAATTAA
GATTTTCTTACTTGATCCCTAGCTCTCTCGGACCCTTGTCATTCAACCGA
TACAGTTTTTTAAGCTCATTTGACACGGCTGCGCAATTTTCACAAGTTAG
CCCTATGTTGGCAATATACATTTTCTCAGACTGATATATAATATACTACG
ATAAAGCCCTTCTCAGTCCCTTGCCTGCCTACACAACTCGCTACAAGTTA
CATTGGGTTCAACCGAGTGTTATATTTCAATCTGTATGTAAGGAACCTAA
CTTTAGATGTTTTGTGGCACCAGAACAACATACTTTGCACATCCCCTTTC
TATCACGATGGAGGATGCCAATTTTGAGAGGGCCTTTGTAAAAGGGGGAC
GCCTAGATTTAGCTGGGAAACTAGGGGGTCAATTAACAAGGAGAACGGTG
TCTTTGATCAACTTAATCATATACAAATATGTTCAGTCTGTTTTTAAGTA
TAAATATGTATATACAACCCAAACACACGTGTATCATGTTAAACACTAGT
TATATTATCAAGTATATTGCAATATTGTGAGATCGTTGGCTTGCGACTAA
TCATTTGTACTTTCATCACTTAAGTAGTGCCTAGAGTGAGTTACCTTCAA
ACAGATTTTCtaaaattcattgcaaaggGAGGTAGGTATATAGGGAAATA
AAGTAAATACAGGCAGTTTAACCTTGCAGCAACCACTTCTCTCCCTCCTG
CCAAGGGCAAGAGTCCAGCTCCTAGAACAAATAAGGCACATGTCTCAAAA
TGGGATACATATCAAAAAGGGGATCCCAAATTTTGGGGGTCTTTGTAGGG
GTTACCAAGATTTTCTTATAAGGATGGGAATATATAGGGGTTCAataaga
aaggggggggggtcggcaATTTTCGTCAACTTGATCATATATACAGCCTC
TTTTAAGTGAAATATGAACCCTCGAATACATAGTAAAGAATAAAAATGCa
agttatatttttatattgtgAAACTATTGGCTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028320-exon-sc0000673-1491911889:3538..4770 | TCONS_00028320-exon-sc0000673-1491911889:3538..4770 | Clytia hemisphaerica | exon |
| TCONS_00028320-exon-sc0000673-1510915933:3538..4770 | TCONS_00028320-exon-sc0000673-1510915933:3538..4770 | Clytia hemisphaerica | exon |
| TCONS_00028320-exon-sc0000673-1575043694:3538..4770 | TCONS_00028320-exon-sc0000673-1575043694:3538..4770 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000673 | supercontig | sc0000673:3538..4770 . |
Blast
The following BLAST results are available for this feature:
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