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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028386 ID=TCONS_00028386|Name=TCONS_00028386|organism=Clytia hemisphaerica|type=transcript|length=1756bp
ttgaaaccagaaaaatagttcggcctaTTAGATCCACTTGCTTAGCTAGA
ACGGCCTATATatcttaaaaacaagcgaaaacactggagtacatatgaaa
ccattgaaaccagaaaaatagttcggcctaTTAGATCCACTTGCTTAGta
agaacggcctatatctcttaaaaacaagcgaaaacactggagtacctatg
aaaccagaaaaatagttcggcctagccctacttgcttagaatggccaata
tctcttaaaaacaagggaaaacactggagtacctatgaaaccattgaaac
taGCAAAATAGTTCGACCTAACCCTTCTTGCTTAGCTAGAATGAAAAACA
AGCGCGGAAACACTGGAGTACacatgaaaccattgaaaccagaaaaatag
ttcggcctaATAGCTCCACTTGCTTAGCTAGAAAGgccaatatctcttaa
aaacaagggaAGCCACTGACGTACCTATGAAACCAGCAAAATAGTTCGAC
CTAACGCTTCTTGCTTAGCTAGAATgaaaaacaagggaaaacactggagt
acctatgaaaccattgaaactaGCAAAATAGTTCGACCTAACCCTTCTTG
CTTAGCTAGAAtgaaaaacaagcgaaaacactggagtacctatgaaacca
ttgaaactaGCAAAATAGTTCGACCTAACCCTTCTTGCTTAGCTAGAATG
AAAAACAAGCGCGGAAACACTGGAGTACacatgaaaccattgaaaccaga
aaaatcgTTCGGCCTAATAGCTCCACTTGCTTAGCTAGAAtggcctatat
ctcttaaaaacaagggaaaacactggagtacatatgaaaccaatgaaacc
agaaaaatagttcggcctagcTCCACTTGCTTAGCACGGCCtttatctct
taaaaacaagggaaaacactggagtacctataaAACCATTGAAACCTGAT
AAATTCTTCGACCTAACCCTTCTTTTTTTAGCTATCAGGCCAATGTCTtg
taaaaacaagcgaaaacactggagtacctatgaaaccagtGAAACCAGAA
AAATGGTCCGGCCTAGCTCTACTTGCTTAGCTAAAATGGGCAGTGTCTCG
TAAAAACAAGAGAAAACACTGGAGAACCTataaaaccattgaaaccagaa
aaataggtCTAGCCTTTCTTGCTTAGCTAGAGCGGACAATTTCTTgtaaa
aacaagggaaaacactggagtacctatgaaaccattgagaccagaaaaat
agtttggCCTATTAGCTCCACTTGCTTAGtaagaatatgcaatgtctcgt
aaaaacaagcgaaaacactggagcacctatgaaaccattgaaaccagaaa
aacaGTTCGGCCTATCAGATCCACTTGCTTAGCTAGAACAAccaatatct
cttaaaaacgcCAGAGTACGTATGCCTAATGTCTAATGTAATATGTTTTT
AAATAGTATATTATATATCATGTTGCAACCATACTACTCTATAATACGTC
TAATGTTTGTTGGAATACCGTCAGATTCAGATCTGATGTGTATTGAAAAG
GCCGACGATTTCGCTTGCCCATACATTGCGAGCTTGCCGGAAATGGGTAC
CAAAATACTTCTCAGATCATTGATGCCTTTTGCCCCATAAAGAGCGATTT
CTCCAATTTTACTGGTTACATGAGGTTACAAACAACATTTTCACTCGTTG
ATATAATAAAGTGATAATTGAGGAAAATGTGTGGTAGATTTTTTAGTACT
TGCCac Run BLAST on NCBI transcript from alignment at sc0000675:130988..132743 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028386 ID=TCONS_00028386|Name=TCONS_00028386|organism=Clytia hemisphaerica|type=transcript|length=1756bp|location=Sequence derived from alignment at sc0000675:130988..132743 (Clytia hemisphaerica)
gtGGCAAGTACTAAAAAATCTACCACACATTTTCCTCAATTATCACTTTA
TTATATCAACGAGTGAAAATGTTGTTTGTAACCTCATGTAACCAGTAAAA
TTGGAGAAATCGCTCTTTATGGGGCAAAAGGCATCAATGATCTGAGAAGT
ATTTTGGTACCCATTTCCGGCAAGCTCGCAATGTATGGGCAAGCGAAATC
GTCGGCCTTTTCAATACACATCAGATCTGAATCTGACGGTATTCCAACAA
ACATTAGACGTATTATAGAGTAGTATGGTTGCAACATGATATATAATATA
CTATTTAAAAACATATTACATTAGACATTAGGCATACGTACTCTGgcgtt
tttaagagatattggTTGTTCTAGCTAAGCAAGTGGATCTGATAGGCCGA
ACtgtttttctggtttcaatggtttcataggtgctccagtgttttcgctt
gtttttacgagacattgcatattcttaCTAAGCAAGTGGAGCTAATAGGc
caaactatttttctggtctcaatggtttcataggtactccagtgttttcc
cttgtttttacAAGAAATTGTCCGCTCTAGCTAAGCAAGAAAGGCTAGac
ctatttttctggtttcaatggttttatAGGTTCTCCAGTGTTTTCTCTTG
TTTTTACGAGACACTGCCCATTTTAGCTAAGCAAGTAGAGCTAGGCCGGA
CCATTTTTCTGGTTTCactggtttcataggtactccagtgttttcgcttg
tttttacaAGACATTGGCCTGATAGCTAAAAAAAGAAGGGTTAGGTCGAA
GAATTTATCAGGTTTCAATGGTTttataggtactccagtgttttcccttg
tttttaagagataaaGGCCGTGCTAAGCAAGTGGAgctaggccgaactat
ttttctggtttcattggtttcatatgtactccagtgttttcccttgtttt
taagagatataggccaTTCTAGCTAAGCAAGTGGAGCTATTAGGCCGAAc
gatttttctggtttcaatggtttcatgtGTACTCCAGTGTTTCCGCGCTT
GTTTTTCATTCTAGCTAAGCAAGAAGGGTTAGGTCGAACTATTTTGCtag
tttcaatggtttcataggtactccagtgttttcgcttgtttttcaTTCTA
GCTAAGCAAGAAGGGTTAGGTCGAACTATTTTGCtagtttcaatggtttc
ataggtactccagtgttttcccttgtttttcATTCTAGCTAAGCAAGAAG
CGTTAGGTCGAACTATTTTGCTGGTTTCATAGGTACGTCAGTGGCTtccc
ttgtttttaagagatattggcCTTTCTAGCTAAGCAAGTGGAGCTATtag
gccgaactatttttctggtttcaatggtttcatgtGTACTCCAGTGTTTC
CGCGCTTGTTTTTCATTCTAGCTAAGCAAGAAGGGTTAGGTCGAACTATT
TTGCtagtttcaatggtttcataggtactccagtgttttcccttgttttt
aagagatattggccattctaagcaagtagggctaggccgaactatttttc
tggtttcataggtactccagtgttttcgcttgtttttaagagatataggc
cgttcttaCTAAGCAAGTGGATCTAAtaggccgaactatttttctggttt
caatggtttcatatgtactccagtgttttcgcttgtttttaagatATATA
GGCCGTTCTAGCTAAGCAAGTGGATCTAAtaggccgaactatttttctgg
tttcaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028386-exon-sc0000675-1491911889:130988..132743 | TCONS_00028386-exon-sc0000675-1491911889:130988..132743 | Clytia hemisphaerica | exon |
| TCONS_00028386-exon-sc0000675-1510915933:130988..132743 | TCONS_00028386-exon-sc0000675-1510915933:130988..132743 | Clytia hemisphaerica | exon |
| TCONS_00028386-exon-sc0000675-1575043694:130988..132743 | TCONS_00028386-exon-sc0000675-1575043694:130988..132743 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000675 | supercontig | sc0000675:130988..132743 . |
Blast
The following BLAST results are available for this feature:
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