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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028429 ID=TCONS_00028429|Name=TCONS_00028429|organism=Clytia hemisphaerica|type=transcript|length=1109bp
CAAAATATCACAAGCAATAGACTAACACTCCCACAAACATTTTATCACCT
TGAAAGTCTGTGTATAAAATAACAGCTCCAGCTCTGAGTTTCTATCCagc
aattttcagaattttggcGTAGAGAGTGTAGAGAAGAACTTTAAATGTAA
AAGTTGCTTTTTCGAAACCCAATTGAAATAACTACTTGGGAACTACTAGG
TTTTGGTGgcaaaagaaaataacaaagaTGTATTCCACAACTTTTGTAGC
AACAACTTATGTTTTCTTCGGCATCATATTGATTTTAGCTCCATTCAATC
TTGTCGCCTCCTCGATCATCATAACATCAAAAGGGTTGAAAAGGtatttt
gatgatgtcatctTATTGATCATTTTTATAGCTCACTTTTCGAACGCTTT
TGTCAATATAGTTTTTGTAATCGTTGTTTGGATCAACGAATCAGATGAAA
CACTTACGATTATAGGTTATGTTAGAGACTTTATCGCCAGCCAGGAAATC
ATGTTCACCGTGTTACTATCAATCGACAGATACGTCGCCGTTCAAAAACC
GTTCTTTTACTCACGCCTCACTCGAAAACATGCAGTCTTATCAGTATGTG
CTATATTATCTATGACTATACCTTTCTCAGTATGGAGAATCTTTTCGGTT
TCAGCTTACTTTATGGCATCATTGGGCTCCTGCATTGGTGGTTTATTCAT
CCTGGCTGCAAACACGATGTTATATCGATCAGTAAAGAGACAATGTCAAT
CCATAATCACCACACTGGTTGAACCAACAGAAATAGAGCAACAGAAACGA
CGTAACAACATTCGAAAACGTCAGCTACGATCTCTAAAGATCTGCATCTA
TATTGCTGGCTCCTATCTTTTAACTTGGTTCCCATTGATGGTGACAGTTG
TACTGCAAATCATATTAGAATTTAACAAGGATATAGTCTTCATTATGATT
ATCCTTGGCTTTTCAAATGGTATATGGGATGTTGTGATTTACTTTCACCT
AAATCGAACATCTAGGAAACGTTTATTTAAACTTCTGCGACTGCGCACAA
CAAAAGCAGACTTGGAATCGTCGAATGGTACTGCTAACGTCTCAAAACgt
caaacaaca Run BLAST on NCBI transcript from alignment at sc0000678:152653..153761+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028429 ID=TCONS_00028429|Name=TCONS_00028429|organism=Clytia hemisphaerica|type=transcript|length=1109bp|location=Sequence derived from alignment at sc0000678:152653..153761+ (Clytia hemisphaerica)
CAAAATATCACAAGCAATAGACTAACACTCCCACAAACATTTTATCACCT
TGAAAGTCTGTGTATAAAATAACAGCTCCAGCTCTGAGTTTCTATCCagc
aattttcagaattttggcGTAGAGAGTGTAGAGAAGAACTTTAAATGTAA
AAGTTGCTTTTTCGAAACCCAATTGAAATAACTACTTGGGAACTACTAGG
TTTTGGTGgcaaaagaaaataacaaagaTGTATTCCACAACTTTTGTAGC
AACAACTTATGTTTTCTTCGGCATCATATTGATTTTAGCTCCATTCAATC
TTGTCGCCTCCTCGATCATCATAACATCAAAAGGGTTGAAAAGGtatttt
gatgatgtcatctTATTGATCATTTTTATAGCTCACTTTTCGAACGCTTT
TGTCAATATAGTTTTTGTAATCGTTGTTTGGATCAACGAATCAGATGAAA
CACTTACGATTATAGGTTATGTTAGAGACTTTATCGCCAGCCAGGAAATC
ATGTTCACCGTGTTACTATCAATCGACAGATACGTCGCCGTTCAAAAACC
GTTCTTTTACTCACGCCTCACTCGAAAACATGCAGTCTTATCAGTATGTG
CTATATTATCTATGACTATACCTTTCTCAGTATGGAGAATCTTTTCGGTT
TCAGCTTACTTTATGGCATCATTGGGCTCCTGCATTGGTGGTTTATTCAT
CCTGGCTGCAAACACGATGTTATATCGATCAGTAAAGAGACAATGTCAAT
CCATAATCACCACACTGGTTGAACCAACAGAAATAGAGCAACAGAAACGA
CGTAACAACATTCGAAAACGTCAGCTACGATCTCTAAAGATCTGCATCTA
TATTGCTGGCTCCTATCTTTTAACTTGGTTCCCATTGATGGTGACAGTTG
TACTGCAAATCATATTAGAATTTAACAAGGATATAGTCTTCATTATGATT
ATCCTTGGCTTTTCAAATGGTATATGGGATGTTGTGATTTACTTTCACCT
AAATCGAACATCTAGGAAACGTTTATTTAAACTTCTGCGACTGCGCACAA
CAAAAGCAGACTTGGAATCGTCGAATGGTACTGCTAACGTCTCAAAACgt
caaacaaca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028429-exon-sc0000678-1491911889:152653..153761 | TCONS_00028429-exon-sc0000678-1491911889:152653..153761 | Clytia hemisphaerica | exon |
| TCONS_00028429-exon-sc0000678-1510915933:152653..153761 | TCONS_00028429-exon-sc0000678-1510915933:152653..153761 | Clytia hemisphaerica | exon |
| TCONS_00028429-exon-sc0000678-1575043694:152653..153761 | TCONS_00028429-exon-sc0000678-1575043694:152653..153761 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000678 | supercontig | sc0000678:152653..153761 + |
Blast
The following BLAST results are available for this feature:
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