TCONS_00028432 (transcript) - C. hemisphaerica

Overview
NameTCONS_00028432
Unique NameTCONS_00028432
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3157

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00028432 ID=TCONS_00028432|Name=TCONS_00028432|organism=Clytia hemisphaerica|type=transcript|length=3157bp
ggaaattttaactaatttactaaaattttactaaaaattaaaatcatggA
AAATAAGCTGTTAAACAAAGACAGCAATGGACTTTCAAATGGTAACAATT
ACAACAATAAGAAACAATCATACAGCAGTGATTACTTtcgaaataaaaat
caaaacggtAATGGTGATATCTGGAATTggataaaaaatttcattaagaa
AAATTTATTGGTCGTTTTAATTGTAACAGGAGCATTAATTGGATTAATTA
TCGGATTAAGCATAAATGATGCGGTACAAAAATTAGGTCAACCGGCACGC
TATAATGTGATTATTACAATCGGTTTTCCTGGGGAGTTATTGCTACGGAT
GCTTAAAATGTTAATTCTACCGCTGATAACATTTAGCCTGATCACCGGAT
TAGCTGGATTAAACGGAAAAGTGTCCGGAAAGATTGGTGCACGAGCTATT
NCTTTCAAATGGTAACAATTACAACAATAAGAAACAATCATACAGCAGTG
ATTATTTTcgaaataaaaaccaaaacgGTAATGGTGATATCTGGAATTgg
ataaaaaatttcattaagaaAAATTTATTGGTCGTTTTAATTGTAACAGG
agctttaattggattaattatCGGATTAAGTATAAATGATGCGGTACAAA
AATTAGGTCAACCGGCACGCTATAATGTGATTATTATAATCGGTTTTCCT
GGGGAGTTATTACTACGCATGCTTAAAATGTTAATTCTACCGCTGATAAC
ATTTAGCTTGATCACCGGATTAGCTGGACTAAACGGAAAAGTATCCAGAA
AGATTGGTGCACGAGCTATTGCGTATTATATGACGACAACATGTATTGCA
GCAATAATTGGCTTGATCTTAGTATCAGCCATTCGGCCGGGTAGCGCCAT
GGTGCCGCCGAAAGATTCGGAGCCACAAAAAGATGTTCGACCACTTGATT
CCTTTATGGACATTGTTAGGAATATGTTTCCTTCAAACATTGTTAAAGCC
TGTGTCCAACAAGATAAGACTAAGATCAAATTCATCAACGGAACATTACT
CTCTGAAGATAAAGTGTCATTTGATGTAACCAGATTCTCTAAAGCTGCAA
TCACTGATATGGTCAACAAAAAAGAGATTTTCGAATCTCCAGGAAGTTCT
CCAAGTACACCACTCAATAAACGAAGCTTTtataagaaagttaaaaatta
cTCAAAACCAAAGATCGGCGATGGACTTGAACAAACTGGAAATGCAAATT
TTCTTGGCTTGATTGTGTTTGCAATGGCGGTCGGGAAAATTGCCGGAAGT
ATGGGAAAAGAAGCTGAAATGTTTTTAGCATTTATAACAACCTTTAATGC
AATTGTAACACGGTTAATTGTACTGGTAATGTGGTATTCACCAATAGGGA
TTGGCAGTTTAATCATGGCTCGATTTGCCGAAATGGAAAACATTCATGAA
ACCTTTGCAGGACTTGCTTTATTCATTGTGACTGTCATCCTTGGTATCGG
TATCCATGGACTGATTGTTCTTCCcgccattttcttctttttcactcGCA
CCAACCCCTATGTTTATTTATCACGTGTTGGACCAGCTATGGCAACTGCT
TTTGGAACTGATTCAAGTGCCGCGACATTGCCAACAACGTTCAGATGTTT
GGAAGAGAACTTGAAGATTGATAAGCGCATTACCAGATTCATCCTTCCCG
TTGGCACCACAATCAATATGGATGGTACTGCACTTTATGAAGCTGTTAGT
GCTATCTTTATCGCTCAATCGGTCGGTCAATCACTTAGCTTCGGCGACTA
CATCGCAATCAGCTTCACGTCAATCTTAGCATCAGTAGGAGCAGCAGCCA
TTCCACACGCGGGTCTTGTCACCATGCTCATTGTATTGGATACTGTTGGT
CTACCAACTGACATGATTGCTATCATATTCTCCGTTGATTGGTTCCTGGA
TCGAGTGCGAACAATGATTAATGTTCTTGGCGACGCTTACGGCGCTGGAA
TAGTACAACACTTATCGAAAGACGATCTCGCCAAAGCTGACCTTATTGAG
AAAGCAAAACTTGAAAGGAAAGCAGAGGAACAAGGAAATTATCGCACGTT
AAAAGATGATGAAGGGGATGAAGTTAGTTTTGAAGACGAGATGAATTCAA
GTAAAAGTTCACAGGTGACCACGTATTGTTGATAGGAATGTGATATTATT
GTATGTGAATCGTTCATCTTCTGAAGAATATTTCATTGTAAACAAACTAT
GGTGTTGAAATGGTGGTTCGAATATATAACTTTCCAATTGTATCACATGA
TAGAATTTGGATAAAATCATACAACATTTGGTATAGATAGACAAATATCT
TCCAAAAGATGAAAGCAAGTCCGAGAAAATTCATCAAGCCAAGATATTCA
AAGCAAAAgatgaaatgtttttatttaaaaacagctATATTTCGTATAGT
ATGAATGAATTTTGCGTAAATGATGTATATGATATTATAAGAAATATaac
tgtttttaaataaaaaatttcatcttttgcTTTGAATATCTTGGCTTGAT
GAATTTTCTCGCACTTGCTTTTTATCCTTTATAGACAAACGTAGAAATGA
TGAAGTAGTTTTCAAATACTGGGCAATTTTGTGGATTATCTGGAGTTAAA
AGCCTTCTTGAAAAACATGACATTGCCACGGGGAAACGTATTTGGGTAAA
AGGACCAATAGGGATGTGCTGCTGGGACAGTTTACCTTTTTCGTCTCTTT
TTCAGCTACCATAAAAACATACAGGGTCGACCCATACAGGGTCATTGAGA
CTCAAGTCTCATTCAGGTCCCTTAATACAAGAAAGTTAGCATAGAAATAG
GATCCATTTTTTCTTACATCAGCGGCGCATCCCCCGTCGGTCGATAAGTA
ATACTCCTCCCACGTCCCACGGAGTGTTACCTCAACttgttaaccctatt
caacctaggcttttaggggcggttcagaactagggggggggcttttcctg
taccatcccttaacttttgatctagtgggtctttttggattaaatttggc
acacaagattcttgtgacgtaaggtaacttttgacaaaaaaattttttcg
atggcgtcactcatcatgcccaaagtgagcaaaaactgaaaatttccttt
gttctta
Run BLAST on NCBI

transcript from alignment at sc0000678:36319..43915-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00028432 ID=TCONS_00028432|Name=TCONS_00028432|organism=Clytia hemisphaerica|type=transcript|length=7597bp|location=Sequence derived from alignment at sc0000678:36319..43915- (Clytia hemisphaerica)
GGAAATTTTAACTAATTTACTAAAATTTTACTAAAAATTAAAATCATGGA
AAATAAGCTGTTAAACAAAGACAGCAATGGACTTTCAAATGGTAACAATT
ACAACAATAAGAAACAATCATACAGCAGTGATTACTTTCGAAATAAAAAT
CAAAACGGTAATGGTGATATCTGGAATTGGATAAAAAATTTCATTAAGAA
AAATTTATTGGTCGTTTTAATTGTAACAGGAGCATTAATTGGATTAATTA
TCGGATTAAGCATAAATGATGCGGTACAAAAATTAGGTCAACCGGCACGC
TATAATGTGATTATTACAATCGGTTTTCCTGGGGAGTTATTGCTACGGAT
GCTTAAAATGTTAATTCTACCGCTGATAACATTTAGCCTGATCACCGGAT
TAGCTGGATTAAACGGAAAAGTGTCCGGAAAGATTGGTGCACGAGCTATT
NCTTTCAAATGGTAACAATTACAACAATAAGAAACAATCATACAGCAGTG
ATTATTTTCGAAATAAAAACCAAAACGGTAATGGTGATATCTGGAATTGG
ATAAAAAATTTCATTAAGAAAAATTTATTGGTCGTTTTAATTGTAACAGG
AGCTTTAATTGGATTAATTATCGGATTAAGTATAAATGATGCGGTACAAA
AATTAGGTCAACCGGCACGCTATAATGTGATTATTATAATCGGTTTTCCT
GGGGAGTTATTACTACGCATGCTTAAAATGTTAATTCTACCGCTGATAAC
ATTTAGCTTGATCACCGGATTAGCTGGACTAAACGGAAAAGTATCCAGAA
AGATTGGTGCACGAGCTATTGCGTATTATATGACGACAACATGTATTGCA
GCAATAATTGGCTTGATCTTAGTATCAGCCATTCGGCCGGGTAGCGCCAT
GGTGCCGCCGAAAGATTCGGAGCCACAAAAAGATGTTCGACCACTTGATT
CCTTTATGGACATTGTTAGGTAATAAAAAGTTGGGATAAATTTGATCTGA
AAAATTTACAGTATACTCTCTATATTTGGAATTTTTTGGTCAATTCAGGC
TCCCAATTCAGTTATCATACTTAGAGGAATAAGTTTTGAGTAGAGCTCCA
TTACACGTTTTTTTCTAGAGTAAGTTTACATTTAAGAAAACTAGGCTTCA
AAAGCATTCATATGCTTCTATTACGTACTCTGTCGTTGTTAATTCATAGA
TTCTGGCTTATTATTTAGGAATATGTTTCCTTCAAACATTGTTAAAGCCT
GTGTCCAACAAGTAAGTCAATGTTCACTTAAACTTTACACGCACTGCAGG
TACTAAAGAGCCTGAAATTTAAATACTTAAACCTATATTACCGAGTTTAT
AAGCAATGTTATTTATTGAAAAAGACTCCCTACCTCACAGCCCTGGTGAG
ACTATTTCCCACAGAAGGGATGAATACTTCTATCGAACTCCCAATGGATG
ATAGAAATTGTATTGTTCTCAGCTTAAATATCCAATAAGGATTGTTTTGG
ATGAATACTTTTTTCTAGTGAATTTCAAATTGAGATAAAATCTAAGTCGA
TTTCCCACTGAGTTTAAAATTGAAGGGTATTTTTCCTACTGGGAACGACA
TTTGAGCTAAATTATTCTGTGGAGTAGGGGATCCTAACGGTTCTGTTACA
CGGGGGTTATGAATATGATTTTCAACTTCACTGTAAAATCTTACTTCGCA
GGATAAGACTAAGATCAAATTCATCAACGGAACATTACTCTCTGAAGATA
AAGTGTCATTTGATGTAACCAGATTCTCTAAAGCTGCAATCACTGATATG
GTCAACAAAAAAGAGATTTTCGAATCTCCAGGAAGTTCTCCAAGTACACC
ACTCAATAAACGAAGCTTTTATAAGAAAGTTAAAAATTACTCAAAACCAA
AGATCGGCGATGGACTTGAACAAACTGGAAATGCAAATTTTCTTGGCTTG
ATTGTGTTTGCAATGGCGGTCGGGAAAATTGCCGGAAGTATGGGAAAAGA
AGCTGAAATGTTTTTAGCATTTATAACAACCTTTAATGCAATTGTAACAC
GGTTAATTGTACTGGTAATGTGGTAAGTAAATGTCATTTTCAAATCAGTG
CTTGTTCAATTCTTAGCAATATACGCTTTTTTGTAAGAATTTACTCTATT
TAAAAATATGCTAAGAATATATCACTATCATGGAATTTGGCAACTGAACA
TAAGAATGATATTTTAGAGCATTTTTAACTGTAAATTACCAATTATCCCT
TGTATACTTAAGCCTCAAAACTTTTTCAAAAATGCCTTTTTTTTGTTTTA
AGTTACATTTAGGTTGAATTCAGAACTTTAAAAAAGCGAGTACCCGGATT
AATTTACGCGAGGATTATTTTGCAAGTTTTGCGAGTTTTTCTGAAAATTT
TACGGAACTTAATACTCGCAAAAATTCTTAAATTAGGATTTTTGCCAAAA
TCCCTAAAAAAAATTAAGAAACTGTTTGAAAAATGGCACGATTTGCGAAA
ATAGATAACGAAAATTAAATTATTTTTGAAAAAAAATTTACTGATTTCAA
TAGAATAATTTGAAGGGAGANGAAAATTTTACGGAACTTAATACTCGCAA
AAATTCTTAAATTAGGATTTTTGCCAAAATCCCTAGAAAAAATTTTCATC
TTTCTTCCTAATCTTGTAGATTTTGTTGTCATGTCATCCAAAAAACGGCA
AAAATTTCAAATTGAGTAAATCACCCGGTGTGGGAAAAGTGTATTTTTTG
GAACGTAAATGATTTTCTCATCCGGGTAAATTTCATGCCCGTTACAGGCT
GTGAAATGCACTTTTCCAGCCCGGTGATTTGCTCAGTTTTTCCTTTGCTT
ATTAATAAGGCTTCACTTTTTCATGCTCGGGAAAGGATGAAAGGGTCGAA
AAAATTTTGGGCTGCACGTATGGCCGTTTTTGAATCGCGAGTGCCCCCCC
AGGCTTTCGGCTTAAAACTCAATGATTTCTTTGTCTTTGTATCGTGTAAA
CAAGATTTCTTCCTTTTTTATTCATACAGGTATTCACCAATAGGGATTGG
CAGTTTAATCATGGCTCGATTTGCCGAAATGGAAAACATTCATGAAACCT
TTGCAGGACTTGCTTTATTCATTGTGACTGTCATCCTTGGTATCGGTATC
CATGGACTGATTGTTCTTCCCGCCATTTTCTTCTTTTTCACTCGCACCAA
CCCCTATGTTTATTTATCACGTGTTGGACCAGCTATGGCAACTGCTTTTG
GAACTGATTCAAGGTAATTTTGAAATAACTTTTAAATTTTTAAAGATTTT
ATCACAATTTTTGAATAAATATCGTTCCTTTCCACCAATAAAGTCCACAT
ATGAAAAATTTCGATCTTTGAAAAGAGCTTTAGGTCATAAATGAGATACT
GTGATATATTTGTGGTGGGGTGTGCTGCACTCTTAACTTATTATACCATT
AAATTGAAATTGGCATGCTGAAGTCTCTATTTATTCGAACATGTACCGGA
AATTAAAATCTTTTTCTTCTGGTCCCTAAAAACACTTGTTTAAAGGTATT
TTACCTAAAGGGTCGAGGAAAGATTGCGCGAGTTAAAAAGGTTTGAGTTA
TGGACACTACTTGTAGTTAACAATTACTTATCCGTTGGTGACTTAAGGTC
TTACTTAGACGATGTTATCGTCCGTTACAGTGATAGTAAAGGCGGGAAAA
TTTGGCGGTATGGCGTTATGGCGGTATATGGAAAAAAAATCGGCGGTAAA
GTTTCGAAGAAAAATAAGACTGACAAACTCTACCGACTGTAAACTCTTTT
CGGCAAAAAACCCGTTTGTGAATTTTCTTCGGCTTTGGGCTTATTTCTTA
GATAGTGATTTGTCTTAGACTATAGCATAGTCTAGGTCTATCATATGTCT
ATGGTCTTACTAAGGAAAGAAAATAAACTTCAATTTCTACTTTCCGATTT
TCAGTGCCGCGACATTGCCAACAACGTTCAGATGTTTGGAAGAGAACTTG
AAGATTGATAAGCGCATTACCAGATTCATCCTTCCCGTTGGCACCACAAT
CAATATGGATGGTACTGCACTTTATGAAGCTGTTAGTGCTATCTTTATCG
GTAAGTTTTTAATAATTACTCTTCTCATAATGCATAAAATAATTGCGAAC
CTCGTTCTTGAAAACTACGATACTTCAACGTCGTCAGACATGATTGATGT
TTGCAAAGCGTTTTCGCGGTTTTGTATCGAAATTATCGACGGGGAGAGTG
AGAGTGAACTTTTGACTTTTAGAGTGACGAAGGAGCTTTTTGTTGGTTTA
TCAATGTCGATCTTTTGTTTTAATGCAGGCACCTAGAAAGGACTTCTGGA
CCACCTTTTCAAAATGGTTCCACTGGAGACCATGCTGGCACACAATGCTG
TTTCAACGTTCATCTAACGTTATATGGACGTTATGAACATTAGATAAACG
TTGAAACAACGTTGTGTGCCAGCTGGGGAAGATGACCCACTGGAGAAGAT
GTACACATTTTTTAAGCAGCTTTAATTTTTGGGTCAAGACTGCGGTTGCT
TAGCATTGTAGCTCATTTTGTGAAAATTTGCTTTGCCCACAACCGCCCCT
GATATTATACCCTTGGCTATTTTTTACCGGTTAGATGATCTAAAAAGCTT
TTACTATACGAGATAGTGAACAAAATTGGATAATTGGAGCACTTGAGTCT
TAACAACCTGGTTGCTTATAAAAAAATGCGTAATATGATTAAGAGGAAGC
GCATCTACTCCGCAGTTTTAAAGCTTAGCAACTCATCGATTCGCTGATAT
TTATAATAAAAAGATTATTCCAATATCTCATAAGAACTTTTCCGTATATT
TCAGCTCAATCGGTCGGTCAATCACTTAGCTTCGGCGACTACATCGCAAT
CAGGTAACTAACCTTAATGTAACTATTTAACGATTTGAGTTTCAAAGAAT
ACTAAAAAAGGCTGAAAAATCGAGTAAAAATATCTAGAAAAATTGAAAAT
TAGAATTTTAAACGTGTCAAAGTAAAATGAAATAGAATTTCGGAATTTTT
CAGCTTTTAATTTCATCAACCTAGTCCCTTTTTTCACTTCCTAAAGACGA
GCATTATCATTATCGAGTATAGCTTTAGTGTTTTCAACACATAAAAAACA
ACATGATAAATACAGTGTGTCTGAAGAAAAGTGGAACAGAATTTATACAC
ATCAAATTCTCACTTATTCGACATTCTGTTTTTCGGATCTTTCTATAATT
CAAACTTACTTCCAGTCCCCGTTAATAAGAAACCTTCTAAAATATTTTCT
ATAATTTGAATATCTCTGTAATTTGACCTAATAATATTCCCTGTTCGAGT
TTGAATTAGCGTGAGTCAGTTAAATGTAGATAAAAATACTAATATATTTC
ATATGGATTTTTATGATTTTCTTATTTCNCTATAATTTGAATATCTCTGT
AATTCGACCTAATATAATTCCCCTGTTCGAGTTCGAATTAGCGTGACCCA
GTCAAATGTAGATAAAAATACTATTATATTTCATATGGATTTTTATGATT
TTCATCTTATAGCTTCACGTCAATCTTAGCATCAGTAGGAGCAGCAGCCA
TTCCACACGCGGGTCTTGTCACCATGCTCATTGTATTGGATACTGTTGGT
CTACCAACTGACATGATTGCTATCATATTCTCCGTTGATTGGTTCCTGTA
AGTCACGTGACTTAGACTTAAGCTTTCAATTTCAATATTTATTTTAGTTT
GATGGCAAGAGTTACTTGAAGGGGTACTTGAATATGAATTTTCTCTGCAA
ACTTCAAAGTAATATTATGAGATGATCTGGCAGGAATGCTAAGCCCATAT
GGAGTCCCTTTGTCGATAGACAAGGTTTGCCGTTAAGGTTTTTGATAATC
TTTTGCTAAAATTTGCCGTTAAAATGACGCTGAATGGGTAAAATTCCATG
TTTATTTTAACATTTTTAGTTTTTCCTTATCAAAGGTCGGCAAGGGTCCT
AGGGTTGCAATGTCGTGTCATAAACTTGACCCCTTAGAGAGACTAAAATT
TCAGCAAAAATTGACCTTTACCGAGATAAAATCGGTGACCCACACCCCTC
GTAACTCTTTTTGCGTAAGTACCTTCCCTTCTGGGTGCTAAACAGAGCTT
CCTTGAGAAATAACAATAAAAAAACATAATTATCATCATAGTTCATCGGG
CGCTAATCGGCTAACGTGAAGTTTAATACTTGAATGAGCGTGTATAAAGA
TTCTTTAAAATAAAAGATATTGACAGAAACAACGTTATTGATTTTTTTTT
GTGAATTAGATAGAATCACACAAAGTCCTTATGAAAATTCAAGTGAAATA
TAGATAAATTTATTGTATAATTATTTCTTTATTAAAGGGATCGAGTGCGA
ACAATGATTAATGTTCTTGGCGACGCTTACGGCGCTGGAATAGTACAACA
CTTATCGAAAGACGATCTCGCCAAAGCTGACCTTATTGAGAAAGCAAAAC
TTGAAAGGAAAGCAGAGGAACAAGGAAATTATCGCACGTTAAAAGATGAT
GAAGGGGATGAAGTTAGTTTTGAAGACGAGATGAATTCAAGTAAAAGTTC
ACAGGTGACCACGTATTGTTGATAGGAATGTGATATTATTGTATGTGAAT
CGTTCATCTTCTGAAGAATATTTCATTGTAAACAAACTATGGTGTTGAAA
TGGTGGTTCGAATATATAACTTTCCAATTGTATCACATGATAGAATTTGG
ATAAAATCATACAACATTTGGTATAGATAGACAAATATCTTCCAAAAGAT
GAAAGCAAGTCCGAGAAAATTCATCAAGCCAAGATATTCAAAGCAAAAGA
TGAAATGTTTTTATTTAAAAACAGCTATATTTCGTATAGTATGAATGAAT
TTTGCGTAAATGATGTATATGATATTATAAGAAATATAACTGTTTTTAAA
TAAAAAATTTCATCTTTTGCTTTGAATATCTTGGCTTGATGAATTTTCTC
GCACTTGCTTTTTATCCTTTATAGACAAACGTAGAAATGATGAAGTAGTT
TTCAAATACTGGGCAATTTTGTGGATTATCTGGAGTTAAAAGCCTTCTTG
AAAAACATGACATTGCCACGGGGAAACGTATTTGGGTAAAAGGACCAATA
GGGATGTGCTGCTGGGACAGTTTACCTTTTTCGTCTCTTTTTCAGCTACC
ATAAAAACATACAGGGTCGACCCATACAGGGTCATTGAGACTCAAGTCTC
ATTCAGGTCCCTTAATACAAGAAAGTTAGCATAGAAATAGGATCCATTTT
TTCTTACATCAGCGGCGCATCCCCCGTCGGTCGATAAGTAATACTCCTCC
CACGTCCCACGGAGTGTTACCTCAACTTGTTAACCCTATTCAACCTAGGC
TTTTAGGGGCGGTTCAGAACTAGGGGGGGGGCTTTTCCTGTACCATCCCT
TAACTTTTGATCTAGTGGGTCTTTTTGGATTAAATTTGGCACACAAGATT
CTTGTGACGTAAGGTAACTTTTGACAAAAAAATTTTTTCGATGGCGTCAC
TCATCATGCCCAAAGTGAGCAAAAACTGAAAATTTCCTTTGTTCTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016106XLOC_016106Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028432-exon-sc0000678-1575043694:42947..43915TCONS_00028432-exon-sc0000678-1575043694:42947..43915Clytia hemisphaericaexon
TCONS_00028432-exon-sc0000678-1575043694:42655..42697TCONS_00028432-exon-sc0000678-1575043694:42655..42697Clytia hemisphaericaexon
TCONS_00028432-exon-sc0000678-1575043694:41844..42214TCONS_00028432-exon-sc0000678-1575043694:41844..42214Clytia hemisphaericaexon
TCONS_00028432-exon-sc0000678-1575043694:40653..40886TCONS_00028432-exon-sc0000678-1575043694:40653..40886Clytia hemisphaericaexon
TCONS_00028432-exon-sc0000678-1575043694:39816..39961TCONS_00028432-exon-sc0000678-1575043694:39816..39961Clytia hemisphaericaexon
TCONS_00028432-exon-sc0000678-1575043694:39013..39061TCONS_00028432-exon-sc0000678-1575043694:39013..39061Clytia hemisphaericaexon
TCONS_00028432-exon-sc0000678-1575043694:38219..38353TCONS_00028432-exon-sc0000678-1575043694:38219..38353Clytia hemisphaericaexon
TCONS_00028432-exon-sc0000678-1575043694:36319..37528TCONS_00028432-exon-sc0000678-1575043694:36319..37528Clytia hemisphaericaexon
TCONS_00028432-exon-sc0000678-1510915933:42947..43915TCONS_00028432-exon-sc0000678-1510915933:42947..43915Clytia hemisphaericaexon
TCONS_00028432-exon-sc0000678-1510915933:42655..42697TCONS_00028432-exon-sc0000678-1510915933:42655..42697Clytia hemisphaericaexon
TCONS_00028432-exon-sc0000678-1510915933:41844..42214TCONS_00028432-exon-sc0000678-1510915933:41844..42214Clytia hemisphaericaexon
TCONS_00028432-exon-sc0000678-1510915933:40653..40886TCONS_00028432-exon-sc0000678-1510915933:40653..40886Clytia hemisphaericaexon
TCONS_00028432-exon-sc0000678-1510915933:39816..39961TCONS_00028432-exon-sc0000678-1510915933:39816..39961Clytia hemisphaericaexon
TCONS_00028432-exon-sc0000678-1510915933:39013..39061TCONS_00028432-exon-sc0000678-1510915933:39013..39061Clytia hemisphaericaexon
TCONS_00028432-exon-sc0000678-1510915933:38219..38353TCONS_00028432-exon-sc0000678-1510915933:38219..38353Clytia hemisphaericaexon
TCONS_00028432-exon-sc0000678-1510915933:36319..37528TCONS_00028432-exon-sc0000678-1510915933:36319..37528Clytia hemisphaericaexon
TCONS_00028432-exon-sc0000678-1491911889:42947..43915TCONS_00028432-exon-sc0000678-1491911889:42947..43915Clytia hemisphaericaexon
TCONS_00028432-exon-sc0000678-1491911889:42655..42697TCONS_00028432-exon-sc0000678-1491911889:42655..42697Clytia hemisphaericaexon
TCONS_00028432-exon-sc0000678-1491911889:41844..42214TCONS_00028432-exon-sc0000678-1491911889:41844..42214Clytia hemisphaericaexon
TCONS_00028432-exon-sc0000678-1491911889:40653..40886TCONS_00028432-exon-sc0000678-1491911889:40653..40886Clytia hemisphaericaexon
TCONS_00028432-exon-sc0000678-1491911889:39816..39961TCONS_00028432-exon-sc0000678-1491911889:39816..39961Clytia hemisphaericaexon
TCONS_00028432-exon-sc0000678-1491911889:39013..39061TCONS_00028432-exon-sc0000678-1491911889:39013..39061Clytia hemisphaericaexon
TCONS_00028432-exon-sc0000678-1491911889:38219..38353TCONS_00028432-exon-sc0000678-1491911889:38219..38353Clytia hemisphaericaexon
TCONS_00028432-exon-sc0000678-1491911889:36319..37528TCONS_00028432-exon-sc0000678-1491911889:36319..37528Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000678supercontigsc0000678:36319..43915 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.0408	7.3868	3.36557	2.44296	7.62913	3.37195	2.21897	1.38492	3.87845	2.80239	1.16574	1.97964	1.72181	1.45698	0.326683	0.23372	1.07972	1.0329	3.97522	2.34654	1.39062	1.49225	5.3871	5.89717	2.57371	3.85891	49.1729	40.4114	1.17068	0.433724
Blast
[Close]
BLAST of TCONS_00028432 vs. Swiss-Prot (Human)
Match: EAA2 (Excitatory amino acid transporter 2 OS=Homo sapiens GN=SLC1A2 PE=1 SV=2)

HSP 1 Score: 369.007 bits (946), Expect = 2.193e-114
Identity = 224/491 (45.62%), Postives = 317/491 (64.56%), Query Frame = 2 
Query:  650 KLGQPARYNVIIIIGFPGEXXXXXXXXXXXXXXTFSLITGLAGLNGKVSRKIGARAIAYYMTTTCIAAIIGLILVSAIRPGSAMVPPKDSEPQK--DVRPLDSFMDIVRNMFPSNIVKACVQQDKTKIKFINGTLLSEDKVSFDVTRFSKAAITDMVNKKEIFESPGSSPSTPLNKRSFYKKVKNYSKPKIGDGLEQTGNANFLGLIVFAMAVGKIAGSMGKEAEMFLAFITTFNAIVTRLIVLVMWYSPIGIGSLIMARFAEMENIHETFAGLALFXXXXXXXXXXXXXXXXPAIFFFFTRTNPYVYLSRVGPAMATAFGTDSSAATLPTTFRCLEENLKIDKRITRFILPVGTTINMDGTALYEAVSAIFIAQSVGQSLSFGDYIAISFTSILASVGAAAIPHAGLVTMLIVLDTVGLPTDMIAIIFSVDWFLDRVRTMINVLGDAYGAGIVQHLSKDDLAKADL-------IEKAKLERKAEEQGNYR 2095
            +L  P   +V+++I FPG++L+RMLKMLILPLI  SLITGL+GL+ K S ++G RA+ YYM+TT IAA++G+ILV AI PG+  +  +    +K  +V  LD+F+D++RN+FP N+V+AC QQ +T  K +      +++ +      + +A+  ++N+                      +V   +K  I  GLE     N LGLI F +A G   G MG +A++ + F    N IV +L++++MWYSP+GI  LI  +   ++++      L +++VTVI+G+ IHG I LP I+F  TR NP+ + + +  A  TA GT SSA TLP TFRCLEENL IDKR+TRF+LPVG TINMDGTALYEAV+AIFIAQ  G  L  G  + +S T+ LASVGAA+IP AGLVTML++L  VGLPT+ I+++ +VDW LDR+RT +NV+GD++GAGIV HLSK +L   D        IE  K +   ++  N+R
Sbjct:   65 RLASPIHPDVVMLIAFPGDILMRMLKMLILPLIISSLITGLSGLDAKASGRLGTRAMVYYMSTTIIAAVLGVILVLAIHPGNPKLKKQLGPGKKNDEVSSLDAFLDLIRNLFPENLVQACFQQIQTVTKKVLVAPPPDEEAN------ATSAVVSLLNET-------------------VTEVPEETKMVIKKGLEFKDGMNVLGLIGFFIAFGIAMGKMGDQAKLMVDFFNILNEIVMKLVIMIMWYSPLGIACLICGKIIAIKDLEVVARQLGMYMVTVIIGLIIHGGIFLPLIYFVVTRKNPFSFFAGIFQAWITALGTASSAGTLPVTFRCLEENLGIDKRVTRFVLPVGATINMDGTALYEAVAAIFIAQMNGVVLDGGQIVTVSLTATLASVGAASIPSAGLVTMLLILTAVGLPTEDISLLVAVDWLLDRMRTSVNVVGDSFGAGIVYHLSKSELDTIDSQHRVHEDIEMTKTQSIYDDMKNHR 530
The following BLAST results are available for this feature:
BLAST of TCONS_00028432 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EAA22.193e-11445.62Excitatory amino acid transporter 2 OS=Homo sapien... [more]
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