TCONS_00028539 (transcript) - C. hemisphaerica

Overview
NameTCONS_00028539
Unique NameTCONS_00028539
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length144

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00028539 ID=TCONS_00028539|Name=TCONS_00028539|organism=Clytia hemisphaerica|type=transcript|length=144bp
AAAATAAGTCGATGAAGGTTGAAATAACTTCACTTGTCTGCTTGTCTact
tacaaagaaaatttgaccTCTATATATACTAGGTCCCTACTCCTAAAATA
AATGTTAATTGCCTGATTACATAATGGGTTGGGGTTAATGCCGT
Run BLAST on NCBI

transcript from alignment at sc0000690:9183..9326

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00028539 ID=TCONS_00028539|Name=TCONS_00028539|organism=Clytia hemisphaerica|type=transcript|length=144bp|location=Sequence derived from alignment at sc0000690:9183..9326 (Clytia hemisphaerica)
ACGGCATTAACCCCAACCCATTATGTAATCAGGCAATTAACATTTATTTT
AGGAGTAGGGACCTAGTATATATAGAggtcaaattttctttgtaagtAGA
CAAGCAGACAAGTGAAGTTATTTCAACCTTCATCGACTTATTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016176XLOC_016176Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028539-exon-sc0000690-1491911889:9183..9326TCONS_00028539-exon-sc0000690-1491911889:9183..9326Clytia hemisphaericaexon
TCONS_00028539-exon-sc0000690-1510915933:9183..9326TCONS_00028539-exon-sc0000690-1510915933:9183..9326Clytia hemisphaericaexon
TCONS_00028539-exon-sc0000690-1575043694:9183..9326TCONS_00028539-exon-sc0000690-1575043694:9183..9326Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000690supercontigsc0000690:9183..9326 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00028539 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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