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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028773 ID=TCONS_00028773|Name=TCONS_00028773|organism=Clytia hemisphaerica|type=transcript|length=1888bp
TTTTGATAAATCTGAGAGCTTGCTGTTaattatgaaattaatatttaTTA
TACTAAACGTTGTATAAGCTTAgtattatattttttaactGGAAAATCTA
TTCTACATTTTCACTGACACTTGACTGGGTTGCATTGACGCTTGGCTTAT
CATCTACAAGCAAGGGTCTGGTACGAGCAAGAAAGGAAACTTAGTCATCA
CCAGCTGTTGTGGCAACAAAGGAGAAGACAGGACAACCTCCTCAACAAGT
ATACGACAATTAAAACAAGTAGCACCTGTCGCACAACACCAAAATCCTCC
TAAAGAAGGAAGGAATTCATCTACTGACAACACGCAAAATATCATCAACG
TCAAACCAATACCAGAAGAACACAAAATGGGATCCGAAAGCTTTTACATT
GAGATCAACTTCAACTATGGCAAATTATCCTACACCACGTTTTGGCGTGC
TTGGGAAAAAGATGCTGGCTTGAGAGACGCCATGCAACAAGGAGTCATCA
CAAATCTGCTCAAAGTATCCGGCGAAAACAAATTAATCATGATTGTAAAA
ATCAGCGGAGATCTACTGGACAATTTACTATATTCCAAAATCCAAGTCAT
TGCTTATTATGCAGATTTGATGAAAATCTCAGTCACGCCGACATATGATT
ATGAATCATTTGCTAATATAGTGAATACTATTACTCAAGTGGAGGAAACT
TTTGAACAATTACCCTCTTTAGATCAAAATACAGGTCTTTTCCATATCTT
GGATATTAAAATGGAGTTCAGAGGTATGACACAAGAGGATTTTCTCACCA
TCTGGAAAGAGGAAATCAAAGCAGCGCTTGGAGCTAAAGAAAAAGGCATT
GCATTGGACATATTGAAATCAGTAGCAGAAAGacgtgtttttgttttgac
aCGTGTAGACTCTTTAGCCTTATTAGACACTATTATTCTTACGCTACCAA
TGATGAGGAAAATGGGAGACCAGATGTATATCACATCTAAACgtgtttca
aaattcaataccTTCATCAAACAAATCAATTAAAAGCAACtgagaaaaaa
tttctttctccaATTTTTGAATGTCTACGCCATTGAAACGAGATTAAACA
AGATATTGAAGTCAAAACAGACTAGGACCGCAAACAGAATGATAAACTTT
GTGGAAAGAAGTTGACTATATCTAgaatttttattacaaactgAAGAACC
TTTGTTCTATTtacattttaaaagattttttcatgcTCCCTGCAATCTAG
CTAGGTTAGTATATTGAAGTTTATCTTACAAAATaacttcaaaaatgaaa
aatatttattacttAAAATTTATAAGACTTTTTGTGAGCTAACATTCCCA
AATTGTGAAGTTGTGAATATTTTATCATTATAATATAGAAATGTCTTAGT
GTATCATAATATAATATTTATCCATTTGTCGTCCATTTATAAAATTGGAC
AGTGTTTTGTACAAGGAAATGAGTGTAACAATGTCAGTCCTAAACATTCT
CATATatcattttgtcattcaatttgGGCCAGAATTTCGGAAATTCTTCT
tggattttagttcgtccaccctcactttaagatatgaatagaatctttcc
aagggtatttttgcaaaatttgccattttccaggaaGTATCCacttattt
tcaataatatttttttgacttgaaaaggttcgtccacccccttgtATGGT
TTTTTAAAAGACTCCAAAGTCTCTCCAGAAGCTAAGATAAAAAAGATCTA
AAAGAAAGGCTGTGATCAAATCCATTTTGTGTTTGTATAGAATGGGTAAA
CTTTTAATGTTTAAACTAAGAACGAAACTTGATAGCACCTTAAGTCTGTG
TTTACGtgtctattttttcaaaatcacttACAGACGGC Run BLAST on NCBI transcript from alignment at sc0000703:128176..134637- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028773 ID=TCONS_00028773|Name=TCONS_00028773|organism=Clytia hemisphaerica|type=transcript|length=6462bp|location=Sequence derived from alignment at sc0000703:128176..134637- (Clytia hemisphaerica)
TTTTGATAAATCTGAGAGCTTGCTGTTAATTATGAAATTAATATTTATTA
TACTAAACGTTGTATAAGCTTAGTATTATATTTTTTAACTGGAAAATCTA
TTCTACATTTTCACTGACACTTGACTGGGTTGCATTGACGCTTGGCTTAT
CATCTACAAGCAAGTAAAGTAACTTTACCAGGCTTTAGAAGGTTTTTTCT
CAAACATAGGGTGTAAAACTCAGAGTGTCTGAGGAATAGAATATTTGTCA
AGATTTTTAAGGCGGATTCATTTTCAGGTTTTTCTATCATAGGGTAGCTG
CAGATTATTTGAAGAGAGTCTCAGCCCAGCTGGCACACAGCGTTGTTTTA
ACGTTCATCTAACGTTATATGGACGTTGTGAACGTTATATAAACGTTGAA
AGAACGTTGTGTGCCAGCTGGGAGGTTGTTAAAGATTGTTCATTTCCAAG
AATCCTGTAGAAATCATCCTATAACTGCTATAGAACTACTATTTGAATGA
AATTAAGTTGAGAGTCAAGGAAAGCTAGAGAGCTTTATTTGAATAAGGAC
TACCTGCGTAAAACCTTACAGTAGAATCAAAATAGCGATTTAACATCGAG
GTGATAATGATTCTCTAATTCGGACCTCTCTTTTTGTTATTTGAAATAAA
ATATTGGTCCCCTCAGACTTGAGCTTCAAATAAAATAATCTCCTTAATTA
GTATCGTTCTCAAAGAAGCCTTGGTCCCTTGAAGATCGAAATAGAGAGAG
AGTTGACTGAAGATATAGAGCAATATTCTAACAGTGTGGTAAAGGTGATT
TAATCTTTCGTTTGTTTATTTCAGGGGTCTGGTACGAGCAAGAAAGGAAA
CTTAGTCATCACCAGCTGTTGTGGCAACAAAGGAGAAGACAGGACAACCT
CCTCAACAAGTATACGACAATTAAAACAAGTAGCACCTGTCGCACAACAC
CAAAATCCTCCTAAAGAAGGAAGGAATTCATCTACTGACAACACGTAAGT
GAAAATTGATGTTTTAGTAAGCTGTACTAAATTGAAATTCGCAAAAAGTT
TTGCCAAATTATTTGATATCTTTAATACCCTATCAGCCATATCACATGTT
AACAAGTGTATAATTGTGGTTCTCTTAATTTAGATTACTTTAAATATCAG
GTGAGTCGTTACCTATTATAAATGTAGAAAGTTAGAGAAAGTCAATATAT
TACTCATTTCTTTATACAAAGGAAAATTGAAGTTATTTCAGGGCCCTTAA
TAGGCGCCAAAGGCGATTTGGTTATAGTTTTTAAAAAGAAAAATGATGTT
TGTTTTGTTTTAGAAGCTTTAACATAGATTTTAAAGTTCTTGAAAACAAA
TATAAAGTTGTAAGTCAAAACAAACAAAACCGAAACATGAATGAGAGGTT
GACTTGAAAAACAAATTTAGCAGGGACATGGAAAGTAACACAACCTGACG
AACCAATTATGACCTAGAGAGCTCGGGTTGTTTTATTGTTGGTAGAAATA
TACTTTAATGGGTTCATGGCAATATCAAATCAAAAGTTATTGTGAGCAAA
CAGTGGAAATAGATTATTCTGAACAAAATTTACATTCTATTGAATTAGCT
GGGTCCTACTTATTTACATAATCAGACATAATTCAAATTTTATTTAAATC
AACTTAAAAGAATAACCAGAGAGAAAGTTTGAGATCTGCTTTTGGACTAA
AGAAACCCTCTGTGAAACCCTCGAAATATTTTGGCCAAACTTCTTCCAAA
TTTGAGATTATGAAAATTTGAAATCTCTAAAAAGGAAACTAAAAGTGGAT
TCTTTTATAACTCAAACGTTCAAAAATTCTATTGTTTTCTCTGATTTTCT
AGCTAATACTTTAGTATTTCGATTTGAGAAAAAAAATTAGGAAGAAATCG
GTGGTGGACCATGAAAGGAATTTATAGACCAAAAGTCTTTATTTAACCAT
CTGACTATAAATAACTTTCATAAATTAAACTTACTTTAAGGGAACTAATT
TTTGTGGGTGTTAATTTTCACTTTTTTCGCAGTTTTTGTCAGCAGAGAGA
TGCAAAATAATGTCATGGTGGTTGTGCTAGAAAATGGACCATTCTTTGCA
TTATGGTAAATATTTTGGAAAGGCCATTAGAAAAACCAATCGAAACTAAC
TGGATTAAACTGAACTGAAACTGTCAACAACTGCCCCTTCATTTTATTTT
TTATCAAAGGAGCAAAACTATTATGAAATATTTATCAATTTGATCAGATT
TTATCAAAAAATAAATTAACTGTAGTTTTTTTTTCGAGGTTGACAGATAC
AGAAAGGTTATGAATTTAATCTGATTTACAATAAAAAGGAGTTTTTTTTT
AAAGAAATAAAAAAATGTAGAAAACTGTAGAAAAATGAATTTCAATGTAT
TTTGGAGGAGCAATGAGGCAAGTCATGACAACTGATACATACAGCAGTGC
TGAATCGTTATTTGCAAAGTGTTGAAACATAATGGGTGACTTTGGGTGTT
GCCAATGTCTATAAGGACATAGCTCGCAGAGATTTTTCTAAGCCCTTTTA
GCTAGGGCCGTTTTTGTAAAATTTAGATCGAGTTTCTAATTGCTCAGCGA
AGCTGTGCACTGATAAAGCTGGTGGTCCCATTGGGTCCAGGGAAAAGCCC
TGGTGGAGATTCAGAGGGTGAAACTCCCGAAAGATTTTAAATAAGTAGAT
GATATCATTTATTTTTCTCTTGTGAACAACAAAAAGTTAAATTTTGTTAG
AAAATTTTGGATCGAGTTTCAAAAGTCTTTGATTTGTTATTTTGGCCGGT
ATACAAACATAAAAAAGTGCTTAGAAAAAAATAATGATTCCATGTGGGTG
GGACAAAATGTCTGATCAGGGTTGCTTTGGCTTGAAAATCATTATTTTTG
TGTCTGACAAGGAGCAATGTCCGACCGTTATTACTCTTTGAATTTGGTCT
CAGTATTAAAAAAAAGTTAGGAAAACTTTGAAAGTGAAATTAAGATCCTA
TTTCTTTAAACCCACCACAGAACAAATGTAAATGTAAATTCATAGCAGGA
TTAAAAGCCATCAAGAAATTTCTTTTGATAGCTCAAGGGATATCCTCTTA
AAAAACTTAAGCACCCAACACAACAATCACTTTTATTAATGACTTTTTAA
TTAATGAGAAATCCTGTTGTGTTTTAATGAAAACATGATACGTTCATAGT
TGTTTTAGGCCTGTGGTTTTTTTCATATTGTAGATGTAATATACAGTTTA
GATAGGGTGCAAATTATGAAGCAGAACTATGATAGAAATGATGAATTTTT
TCAATAAACTCATCAAATGAATTGGAAGAAGTTTTCATAGAGAATTCATG
TTCTTTTTCTTTAATTTCACCACTTTAGAGTATCCAAGAAAGTTGACAAG
GTGGGAGAAATGGTAAAAGGAAAGTTAGAAAGATTCTGAGATTTATGAGT
GTTTTTGAAAAAATAAGGGCTCGTTTTACAAAATGATGAAATAAGTTATA
ATTTTGGTGAGTTAGCAATTTTTTGATTTTATTGATAATTTGCTAATTTT
CGCAAATTTTGCTTGAAGAAAGTAGTTCCCCCCAAATTATACCTTTTGAG
GTATTATTCACTAGGTTAAGCAAACGAAAACAATGAAAGGAAAGTGTCAC
AAAGTCTTCTGAATTTTTTTGAGAACCTAATCATTTTGATAAATGATATA
TTCATTTTAGATGAAAATCTTTAAAAAAATCTTTTTTGCTGGAAGCAGGT
TAACATTTTCTGAAATTAGCACTCCCAAAAATATCCTGTTACAGAAGTGT
ATTCATCAAACTTCTTCTGTTTTCAATTGTATGTATTTTTCCTTTGAAGA
GGTAGACTTTCTTATTTTTTCAAATCAAGTAAAATTACATATTAATGACC
AGAGATCCGTTGAATGCATTCATTTTGCCAACAAATTTTCATGAAAAATT
TAACAGGAAAATTGTTAAAAATCTGAATTTTTAATTTTCAAGCAAAGGAT
TTTCACAATATTGGATTTATTCAGAAAATTGATACTTCGTTCAGTAACTT
TGAATCTCATGATTATAATCTTTTCTTCAAATTCTTTTAGTAATTATCTT
ATTTTTCATTTGAAACTTCAGATAACGCCATATTAATTTTTTAGCTTGTG
AAAACACTATATTAATTTTTTAGCTTGTGAAGTGTGAAGTTGTAAAAAAT
AAGTTTACAAAAAATATTAAATATTGCCTAGAAACTTTTCCAGGCAAGAC
CAATCTGATAGCTTTTGAAGTGTGAAGTTGTAAAATAAGTTTACAGTATA
AAAAAATATGAAATATCTTTATTTGAAACATTTCAAATATCTAAGAAACT
GTTGATGAACTTCTCACTTTCTGCAAGTCATTCCCTTCAATAAAAACATT
TAAGTAAAGTAATTTCAAATCTATCAAATCAAACTGACTACAAGTCTCAA
CGTAAAGGGTTATGTTTGCTAAAATTATTTTTATTCAGGGTTTGAATGAA
ATCCAGGTTTTTCTACATAAAATTCATAAAAGAATATAACAAAATTGATA
CATAATTTTGTGACATTTTCTTTTTGTTGTTTTCTGAATTGTTTTTAATC
CAGAAAAATTCAATACAAGTGCATTAGCTAAGGGCAAAATTTCAAAGTTC
ATAATTCGAGTGCAATATTCCTTGCTTGAAGAATGAAACCAGTTCCTAGA
AGAGTTGTGCTAGAACCAGCTTTTTCAGACTTGGAAACTTTTACCTAAGA
GCACAATGAGTGGTAAAAGTTTTATGAAACAGTTTGATAATATCCCACTC
AGGCACAAAGTATAACAATCTTAAAAGGAACATATCAAAAAAGTTTGAAC
CATCTGAAATACAAGCTAAGTTGAAATTAACACAAAATCTCCTTTTTCTG
TTTGCAGGCAAAATATCATCAACGTCAAACCAATACCAGAAGAACACAAA
ATGGGATCCGAAAGCTTTTACATTGAGATCAACTTCAACTATGGCAAATT
ATCCTACACCACGTTTTGGCGTGCTTGGGAAAAAGATGCTGGCTTGAGAG
ACGCCATGCAACAAGGAGTCATCACAAATCTGCTCAAAGTATCCGGCGAA
AACAAATTAATCATGATTGTAAAAATCAGCGGAGATCTACTGGACAATTT
ACTATATTCCAAAATCCAAGTCATTGCTTATTATGCAGATTTGATGAAAA
TCTCAGTCACGCCGACATATGATTATGAATCATTTGCTAATATAGTGAAT
ACTATTACTCAAGTGGAGGAAACTTTTGAACAATTACCCTCTTTAGATCA
AAATACAGGTCTTTTCCATATCTTGGATATTAAAATGGAGTTCAGAGGTA
TGACACAAGAGGATTTTCTCACCATCTGGAAAGAGGAAATCAAAGCAGCG
CTTGGAGCTAAAGAAAAAGGCATTGCATTGGACATATTGAAATCAGTAGC
AGAAAGACGTGTTTTTGTTTTGACACGTGTAGACTCTTTAGCCTTATTAG
ACACTATTATTCTTACGCTACCAATGATGAGGAAAATGGGAGACCAGATG
TATATCACATCTAAACGTGTTTCAAAATTCAATACCTTCATCAAACAAAT
CAATTAAAAGCAACTGAGAAAAAATTTCTTTCTCCAATTTTTGAATGTCT
ACGCCATTGAAACGAGATTAAACAAGATATTGAAGTCAAAACAGACTAGG
ACCGCAAACAGAATGATAAACTTTGTGGAAAGAAGTTGACTATATCTAGA
ATTTTTATTACAAACTGAAGAACCTTTGTTCTATTTACATTTTAAAAGAT
TTTTTCATGCTCCCTGCAATCTAGCTAGGTTAGTATATTGAAGTTTATCT
TACAAAATAACTTCAAAAATGAAAAATATTTATTACTTAAAATTTATAAG
ACTTTTTGTGAGCTAACATTCCCAAATTGTGAAGTTGTGAATATTTTATC
ATTATAATATAGAAATGTCTTAGTGTATCATAATATAATATTTATCCATT
TGTCGTCCATTTATAAAATTGGACAGTGTTTTGTACAAGGAAATGAGTGT
AACAATGTCAGTCCTAAACATTCTCATATATCATTTTGTCATTCAATTTG
GGCCAGAATTTCGGAAATTCTTCTTGGATTTTAGTTCGTCCACCCTCACT
TTAAGATATGAATAGAATCTTTCCAAGGGTATTTTTGCAAAATTTGCCAT
TTTCCAGGAAGTATCCACTTATTTTCAATAATATTTTTTTGACTTGAAAA
GGTTCGTCCACCCCCTTGTATGGTTTTTTAAAAGACTCCAAAGTCTCTCC
AGAAGCTAAGATAAAAAAGATCTAAAAGAAAGGCTGTGATCAAATCCATT
TTGTGTTTGTATAGAATGGGTAAACTTTTAATGTTTAAACTAAGAACGAA
ACTTGATAGCACCTTAAGTCTGTGTTTACGTGTCTATTTTTTCAAAATCA
CTTACAGACGGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028773-exon-sc0000703-1575043694:134475..134637 | TCONS_00028773-exon-sc0000703-1575043694:134475..134637 | Clytia hemisphaerica | exon |
| TCONS_00028773-exon-sc0000703-1575043694:133644..133813 | TCONS_00028773-exon-sc0000703-1575043694:133644..133813 | Clytia hemisphaerica | exon |
| TCONS_00028773-exon-sc0000703-1575043694:128176..129730 | TCONS_00028773-exon-sc0000703-1575043694:128176..129730 | Clytia hemisphaerica | exon |
| TCONS_00028773-exon-sc0000703-1510915933:134475..134637 | TCONS_00028773-exon-sc0000703-1510915933:134475..134637 | Clytia hemisphaerica | exon |
| TCONS_00028773-exon-sc0000703-1510915933:133644..133813 | TCONS_00028773-exon-sc0000703-1510915933:133644..133813 | Clytia hemisphaerica | exon |
| TCONS_00028773-exon-sc0000703-1510915933:128176..129730 | TCONS_00028773-exon-sc0000703-1510915933:128176..129730 | Clytia hemisphaerica | exon |
| TCONS_00028773-exon-sc0000703-1491911889:134475..134637 | TCONS_00028773-exon-sc0000703-1491911889:134475..134637 | Clytia hemisphaerica | exon |
| TCONS_00028773-exon-sc0000703-1491911889:133644..133813 | TCONS_00028773-exon-sc0000703-1491911889:133644..133813 | Clytia hemisphaerica | exon |
| TCONS_00028773-exon-sc0000703-1491911889:128176..129730 | TCONS_00028773-exon-sc0000703-1491911889:128176..129730 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000703 | supercontig | sc0000703:128176..134637 - |
Blast
The following BLAST results are available for this feature:
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