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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028810 ID=TCONS_00028810|Name=TCONS_00028810|organism=Clytia hemisphaerica|type=transcript|length=1949bp
gatgagcagaagcctagagtTTAGAGTGATTCGTGCAAATTGGTAGCTTA
ATCTAGAGGGAATCGACTACATTTCTGATGTCTTATTCTAACAGTCACAG
ATTCTGCCTCTATGTACAACAGAGGAGCCTCTCAAACACCAGAAAAGTTG
ATGATGAAACTCCAACAAATCCTGACCGTTTTACTTTCGTCCGGTGATGA
AGAGTGTCCGATTTGTTTGGACGCTTTCAACAATCCCGTTATCACGCATT
GTGCTCACTTGTATTGCCGACCCTGCATCGAAGGTGTGATCAGGGCGGAC
AAACCAAAATGTCCATTGTGTCGTAACGACATTTCTAAAGAGAAACTAGT
TAAACCGGCAGCCGAAAAAGATGACATCATAAACGGTGAAGGAGGGGGAG
CTAAGCAAGCAACGTGGAGCTCCAGCTCCAAAGTCGATGGATTAATCACA
ATGCTAAAACAGGAGTCTGAAGAAAACCCGCGCCGTAAACACCTTGTCGT
TTCTCAATTTGCACAATTTCTCAACCTCCTTGAAAAGCCGATACAAGAAT
CCGGATACAAGTTTGTCCGGTTGGATGGTTCCATGACCATGAAACAACGA
ACAGATGCTATAACCCGATTTTCTGATAAATCCGATAATTCCCCGACTAT
CATGTTGTTGTCGTTGAAGGCAGGGGGTGTCGGATTAAATCTGACGGCTG
CTACTCGCGTTTTCCTTATGGACCCTGCATGGAACCCTGCATCGGAAGAT
CAGTGTTTCGATCGATGTCATCGCCTTGGTCAAACAGAAGAAGTCAAAGT
ATACAAGttcGTCGTCAAAAACACAGTGGAAGAGAAGATGTTGGAATTAC
AAGACAAAAAACGAGACATGATGAAACGAACGTTCGGACCAAAACAATCG
AGCAAAGACCGACAGAAAATGCGCATAGAAGATGTCCAAACACTATTTTC
ATAAGACTCTTGTTACATGCTGCAATATTCGGTGCACCCACGGATCCTAA
AGTTGGATATACATTTACGGTAAATGCTTGCCTTCCATTATGCCTTCCAT
TATGACATATGTAACGTGAACCGGACGTCGAAACAACGTGTTTCCACTGG
GTCCTAGAGAAGTTAACCATACATTTTTACATGCATTTCTTTGTTGATCA
TAATTTGGTCAGGGGCGGTCATTCTGTTCAGAATACATCCAATAATTTTC
TCTCCAGAGCCGATGAGTTATAGATTTTAATCATGGCAAGAAATTTGTCT
TAAAATGGTATTTTACGGtacaataaaacttttgtttaagaatatttgtg
ttttgGGTGGTTTGCCATCCATACAAAGTCTATCTTtgctttttaaagtt
tttctgatttatttGAGTTGTATACTTTACCATGTATTTTTAGTTAgaga
tattttttaagttttacttttcttttattACATGTATTTACTTAGAcagt
gaaaaaatgaagatttattgTATAACTGATGTTTAGGGCGCCCATtattg
taggggttcgaaataccgttttcccgtcaaaatttttgttgaatcccgaa
aattgaaaaaaatagtaacaccgtcacaccggtttgtagaggttaaaata
ccggcataatgacaaaaaataaggctaaataccgtcaccgtctgatttta
aaataccgttttcccgtctcttttttcgtcaaatcccatAATACCCCTCC
CTCCCTATTATATGATATTTCGACCGATTTTGACCTATCATTTTATTTCT
TCGTGACCCTCACTCCCCTCACCAGACCCTTTCGATTATTCTCTTGAGTA
CATTTATAAACTTATTTTTTGTGTTAATATTTAGATATTTTGAAAGTTAG
AATAGTTTTTAtgttgatacacgtttttttacttaCGTTGTAAATACTTG
ACATCATATTTTTTTGAAGACATGAAACCCGTTAGTTTGTGAGTTTCGA Run BLAST on NCBI transcript from alignment at sc0000705:40675..55494- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028810 ID=TCONS_00028810|Name=TCONS_00028810|organism=Clytia hemisphaerica|type=transcript|length=14820bp|location=Sequence derived from alignment at sc0000705:40675..55494- (Clytia hemisphaerica)
GATGAGCAGAAGCCTAGAGTTTAGAGTGATTCGTGCAAATTGGTAGCTTA
ATCTAGAGGGAATCGACTACATTTCTGATGTCTTATTCTAACAGTCACAG
ATTCTGCCTCTATGTACAACAGAGGTGAATCTTCTTTTGGCATCCAATTT
CTTGATTGTGAAAATCAAACTCGGTCATCATCGTAATTTAGGAGCTAAAA
ACATGGTTAATATCCTTGAGAGAGGTAATTCTACCTCTAGCTTGGTTTGA
AAATAAATCAAAGGAAAATAGTGGAATTAAACATGATGCTCAGTGCTGGG
ACTGAAGACTTTTTAGTAATCTTCATTTGGCCCTTTTCTATCCGTGAAAC
AAATAATGATACCCTCAATTTTAGCTTCACATTCAACTTAGAGAGAAAAT
GACCGATTCTGGCAGAACTGTGAAGGTTAAAATAAATTCAAAACGAGTTA
TTAGAATATGTCTTTGAGCATCAAGGCAAATCTTAAACGCTTTGCAAAAA
TAAAAGGTTGCGGTCAATCCCGATGGGCTTCGAGTCGGGTGATGTCTAAC
TTAGGGTGAATAGACAACCCCCTGGACGTACGCTATGTCCAGGCGCGCCT
TACTAGAAGGATCCTGATAACCAACTCACAACGGACCACGTTTTGTGAGA
AAGGAAAAAGTTATAGTAATGCAAACAGTTTTGCTTGAACTTTTACTTGT
GGTAAACAAGAACTGGGATTTCATGCTTATTTCCTGAGAATATTTTGTCT
TGCTGTAGTTCTGGAAATTCCCTTTGCACTTTTATAAAAAAGATCAGTAC
GTAAGCATTATATCATAATCGATTTGATTTTTTTTGATCCTCCAATATCT
CAAGTGATGTTATTATATCCCCTTCTGACAGACATTTTTTAATAGTATTT
CGGAAGGCTTTAAGTTTAACGAATCATGTTCAAGACTCTGACATAAAAAG
TGACCATTGCTAATGGCTTAATTCCCCTAAAATCAAGATAGGCACTGATT
GCTCCTTTCTTTTTCTCACTTTCAATTTAGGAGCCTCTCAAACACCAGAA
AAGTTGATGATGAAACTCCAACAAATCCTGACCGTTTTACTTTCGTCCGG
TGATGAAGAGTGTCCGATTTGTTTGGACGCTTTCAACAATCCCGTTATCA
CGCATTGTGCTCACTTGTATTGCCGACCCTGCATCGAAGGTAAACTTTTT
GTAGATTGATACCTAGCTATTTTATTTTCACGTTTTTTTTCATAAGAACA
TCCAAAGTTTCTGAAGCATTCGGATGTTCTTAACATTTTGAGTAAAAAAT
AATGCTCTTAACCTGTTCTTATTTTCACCATTTGAGAGTATTTTTGTGCA
ATTTCCTAAGACATTGGGGTATAGGCAAAGCCTTAAAAACTTGTTCTTAA
TATTTTGACCATCGAAGCCTTATGTTCTTATATAGTAACCTCTTACTTCT
AAGTCGTGACCGCTCGAAATAAAGAAGGGGTTCGTTCTAGCGCTGATTAT
ATGGCTGATTACATTTAGCTTGAAGAGGAGTGGGGTGATTAATCCGTAAT
AGCCCTGCTGTAATTACCCCGCGAAAAGAGAAATCTTTGAAGAAAAGCCT
TACGACTTTTTTCAAAAACTAATCGATTTCATAGTTGTGCAATTCGAATA
TTTTGATGGGTTAGTTGTCATTCGAACTTCTATTAAGTGACAAAAATAAA
AAGGAAGATTAAAAAAAATATATGAACAAAATAAGAAAAAATGAGGAGTG
ACTGAATTTTAATTCATCCATATTAATTAACGAGAAATAACATAGTCATT
CGGATGATTTTGGGAATAATAGCCCCTTGTTTCATTGAAAACATTTCAAA
TTGCCCTCACTACGTTTGGACCATTTTGAAATGTTTTCGATGAACCTCGG
GACTATTATTCCCAAATAACCCTCCAAACCATGTTATTACTAGTACTAAT
CGTTTCCCGCAATTTTTACTGTAGGTGTGATCAGGGCGGACAAACCAAAA
TGTCCATTGTGTCGTAACGACATTTCTAAAGAGAAACTAGTTAAACCGGC
AGCCGAAAAAGATGACATCATAAACGGTGAAGGAGGGGGAGCTAAGCAAG
CAACGTGGAGCTCCAGCTCCAAAGTAAGTATCTGGAAATTATTGGAGTCT
CGGAAGAGACAATTATTAAAGTCAATTTTCATTTAGATTTCAATTTCCTT
TATTGTTATTAGTGCTGAATATTTTGACACTTATCAAGTGTCTTCTTCGA
ACAACATCATCTCTACAAATGTTATAAAAACAAATTTTACACGTCTCCTA
GAAATTTGAAAAAAGCTAGATGATTGGATAGCTATAAAAATAAATAAAAA
CAAAGAAAAATGTGCCGTAGAAGAATAGAGAAATATGGAGGACGCACCAA
AGACAAAGAGTGCCATGCAAAAGCAAAGCGAAATAGGCTGATAATATAGT
ACAAAATACAAAAATACAAAATTTATACACAAAAAACTGATAATCATTGT
TAGTAAATATTCATTAAAATAATCCAAAAAAGGTGCTGCGAATATAAATT
GACTTACAATACGACCCGAATACGATTTTAAATAAAACCTTGCAAAATTT
TTTCTTTGAGGTCGCCGCACATTTTTAAACTGTAAACTTCTTCTCGGCGA
AGCTTCGAAGACCAAAAGCTAACTCAAGGTGCCCCTAGTAACCAAATTTG
AATGGCTATATGTATGAGTAAAAATACGCCGTGCAAAAATCTGATTTCAA
AGTTACCCCGCAGTGCAATGACTTCAAAATAGAAGAACAAATGAAAATTT
GTACGGTTTATTTTTGAATTATGCAATCTATCGCAATGGAAAAACGACAA
TACCAGGGTATTATCTGGCGCTATCAGCGAGCATAAAAAAACCGATAATA
CACAGAGAACGAGGTTGATTTATCACAAATCCATTGAACCAGTCACTATC
ATTGTGACACCATTGATTATCAAAAGACAAGCTAATATCATCTTAAACAA
AGCTTGATTGATCCGTTTCGAAAGCCAGAATCCTATTGGTGTGGCAAGTA
ACCCTGACAACGCTACACTGATATAGAGGTACTTGTCGGCATCTGTAAAC
CATGTTTTCGAGGGATATTTTTCTGGTGGTGATTTCACTGCATACGTTAT
TATACGGATTATAACGTTGATGGATGCTACTATGGCTCCGTTAGCTTTAA
TTTGCGACTTGGGATATTCGAAAAAAAAGAATAAAATGATAAGAGGTGGC
CCCCTGACGCCGATCAGGCCACCCAAAAAGCCGCTCACAAAGCCAGCTAA
TACAATCCAAAACATGATTGGGCGTAAAGGCCAAAGTTGTTGTTTGGCGT
CCGCCCAAAAAGAAGGTGGTTTTGACGAAGGTGTATTTTGATGTGACTCA
ACATCAATATCATATGAGGAGGAGGATATCTTCTGGAGTACTTCTTCTTG
GGTGATTCTTCTTTGATGATCGTCTGGATCCTCCTCTGCCAATCGTATCT
TCTTTCGTGCTTTCCCTTCTTCGTTCAATCTTTCAAACTCCTTGATCTCT
TTTTCAGAGAATTCTGGAAGTTCTCCTTCATACTCCAACATATATCCTGA
AAAGAATTTCAAATAGAACTCTTATTCTCTGCCGGCATCAGATTTGTGAG
GAGCATGTCCAAATTTACTCTGTACCAGAGTGTATCTCAGGTTTATTGCT
TCGTACTACACTCTGTGCGCATTGTCTGTTTGATTAAAAATTTCCCGTAC
GGAGACCTCTGCAATGAAGTATGATTTATAAATAGCAACACTTCTCACCG
TCTCCCCTCTCTCTCAAACACTCCATCGCAGTGGTCGGTTTGAAAAATCT
CAAATGAGAAAAGACAATGACAACAGACCCTCTACGGCAATGAATTTTGA
AATCAGCCGTAGATACTGGGTCTGTGTACAGACAAGTTCAAATTTATCCC
TGATAATTTTTTGGAAGCTCTAGCTCATAGGAGTCTACTCCTATGTTGCC
AGGATTTCTGAACCGCCAAATAAAAACCAAATCAATGATTGAAAATAAAA
GATTGATTTTAGTTTAACGAGTTTAAGGGTTTCGGAATTTTGCCCAAAAA
CGTTCAGCTGACGTGGTTTTTATGGTTGAGGAGGTCCATTTCATTGCTAT
GTGGCTATGCTGTAACCCCCTGGAATTCTAGGCAATTTCAGGTTTTCAGG
CAGTTTGAGTAGGATTTAAAAAGCCACTCCCATGGAATTGCAGTTATTTT
TAACAGATTTTTGTCTCCCTATGGAATTCCGCCACATATCAAACCTTACC
CCCTTGGAACGGAAATTGACCTCCTCAACAGGGGATATACGTTTTTTGGA
CCTACCCCGGTGGAGGTCCTATAAATTAACCTTTGTCCGTCTGTCCGTCC
GTCTGTCCGTCCGTCCGTTAGTTACCAGCTTTTCTCGAGATTGGCTCATT
AGTTTTTTCTGATTTTTTGCACAATGATGCATACATGGCAATGCCCAAAA
TGTGACGGAGCCCGATTTTCGAAAAAAAATTTTTGGGGGCAAATTTGGGC
CAAAAAACGGCTAAAAAACGGGTTTTTTGGACTTTGTGAAAAATTGGATC
CTTAATTTTTTCTGATTTTTTGCACAATGATGCATACATGGCAATGCCCA
AAATGTGACGGAGCCCGATTTTCGAAAAAAAATTTTTGGGGGCAAATTTG
GGCCAAAAAACGGCTAAAAAACGGGTTTTTTGGACTTTGTGAAAAATTGG
ATCCTTAATTTTTTCTGATTTTTTGCACAATGATGCATACATGGCAATGC
CCAAAATGTGACGGAGCCCGATTTTCGAAAAAAAATTTTTGGGGGCAAAT
TTGGGCCAAAAAACGGCTAAAAAACGGGTTTTTTGGACTTTGTGAAAAAT
TGGATCCTTAATTTTTTCTGATTTTTTGCACAATGATGCATACATGGCAA
TGCCCAAAATGTGACGGAGCCCGATTTTCGAAAAAAAATTTTTGGGGGCA
AATTTGGGCCAAAAAACGGCTAAAAAACGGGTTTTTTGGACTTTGTGAAA
AATTGGATCCTTAATTTTTTCTGATTTTTTGCACAATGATGCATACATGG
CAATGCCCAAAATGTGACGGAGCCCGATTTTCGAAAAAAAATTTTTGGGG
GCAAATTTGGGCCAAAAAACGGCTAAAAAACGGGTTTTTTGGACTTTGTG
AAAAATTGGATCCTTAATTTTTTCTGATTTTTTGCACAATGATGCATACA
TGGCAATGCCCAAAATGTGACGGAGCCCGATTTTCGAAAAAAAATTTTTG
GGGGCAAATTTGGGCCAAAAAACGGCTAAAAAACGGGTTTTTTGGACTTT
GTGAAAAATTGGATCCTTAATTTTTTCTGATTTTTTGCACAATGATGCAT
ACATGGCAATGCCCAAAATGTGACGGAGCCCGATTTTCGAAAAAAAATTT
TTGGGGGCAAATTTGGGCCAAAAAACGGCTAAAAAACGGGTTTTTTGGAC
TTTGTGAAAAATTGGATCATTATTTTTTTCAAATTTTTTGCCTTAAAGTA
GGGTACCATCATAGGTAAAAGATGGCTTAAGCAGATTTTTGCAAAAAAAT
TTTGTTGGCTCAAAAAACGCATGTTTATCTATAAGAATCACTATTAATAA
ACATATATCAATGTTCTTAGCCAAATTACTCACTTTTTTGGAGATGTTTT
TTTGCTCACGAAGTCTTGAATATGAAAGAACATTTCAAGAGCATGAAATT
TTGGTTTCTAAACGTTTTTTTATAAGAAACAAACGACTAATTTTAATAGA
TCATCACTATTTGTGTTCTGAATGATTGTTTAATGGTCACGTCACGTAGA
TATCAATTATAAACGTGTTAAATGCATAATCCAGGTAGGTCCATCAAAGT
ATCACTTGTTTTCTTCTGAAAAAGCCCAATGTATAACCTTGATATGCCAA
GCAAAGGTAGTTAACTGACTTAAAAAGTGTTCCTTTACCTAACTTCTGCA
TGACATCTTTGCAAATAGATTCGATGATTTTAACGTCATTTGTTGAAAGA
CCTCCCTCTCTTGCCCATTTCTTCATTTGTTCAGTCCTGAGGCTTTCCNG
AAAGACCTCCCTCTCTTGCCCATTTCTTCATTTGTTCTTTCCTGAAGCTT
TCTCCGCGTGTCAAGTTTTTCCACAAAGATGACTTCTTCGCTCTCAAAGC
CGCTTCTTTACCAGCGTGTGTCGAAGATTCTGTAGTATTTTCGGTGTTCA
TAAAGTCGAATAATTCATCTAAAGTCGTCTTTTTGTCTGCTAATAGTGAT
TCGTATGACAGTTGATGAACCTGCTGGCTTGTTAGAGTTTCTGTCAGGTT
GATGGCAACTAGTTGCAGTTTTTTCCATGTTTGAGCGATGGTGTAGTAAT
GAGAGTTTGCGATCTGGGATGCTTTGTAAGAAGATAAGCAGACATCTCTT
GGATCACGATACAGGTATATGTAACGTAAACGATCACCAAAATGCTGACT
AAGCTCTTTATGAAATTTGCCGTATGACACTGATTTACAAACCCAAGTTT
TGCGACCGTTCTTTACAGTAAATTCATTCATTAGACTCCCGAATATGGCT
ACCAGTGGGACGTCAGTGCTTTCACATTGCTGGTAAACGACTTCTCGATC
AAATTTGATTTTCTCCCCATGTTCATCGAGCCATGGTACTGGATTTTTCT
CGACAAATTCGCAGATCAGATTTATCAATCTTTGAAGATTTAAAGGTATA
GACAGGTCACCGAACTTGTGAAGAATGGGCATGAAGTGCTTCAGAATGTG
TGGAGGGTGAGGTGTAGCGATCGTTTCACTATCCGTGATCATGGTGTGAA
GCCAGTTACTCCCTGATCGCTGACAACCAATCAAAAAGAAAACATTTGAG
GCACTAGTACTTTGGTTGTTTTTATCCCAGTTAGCCTTCTTGATAATGTT
ATCTTTGCCAACGTTAACTCCGAATTCCTCAAATGCTTCATTATCGTGAG
CAATGTCTCCCGCCTTCGCATCTTGTACTTTTTTTGTTAAATCGGCTTTC
TCTTTTCGTTTGTTCGATATATAAAGATAAATCTGCCACAACGATACCAA
AATGCTTAAAACACCCACCACGATCTTCAACGCCCCAACAGGTGTTGAAT
CTTGCAGGTACTGGCCCAGCGGCGTCGCTACTAAAGTTACCGGTACAAAC
CCTAACAAAAGGTCGAACCGGATATTTTTCTTCAAATTAGCGCGCCATAG
AACAACGGGTAGAATGACAACAAAAGCAACCGTCTGAATGAAGACAGCGT
ATCTAATACTGCAACACTCCAGCCAATCCAGTGATCCCAATTGATAGAGA
AACAAGAAAATGATTGCCATGGCGAAACCAGTCGCACTGAAAGCTATGGT
ACCGAGAAAAACGGAGACAGAAAAGAACACAACCACACTCGCTTCCGCCA
TCTTTGGTCCACCTAGTGTAAAAAGACAGATTTTAGAATTCGATTCGTTC
ACAGCGAAAACGGCTGTTAAACGACTGTAGTGATGTAATCGGTATAAAAT
CACTGTCCCTGATTATTAACAAATGCACCCCTCTGTTGCTATTGCGTGAC
CCAGCTATTAATACTGTTTCTAATCTTTTATATATTCAACCAATATTAAA
TTACAAAATTCCATACTATTTTAGGTTAATACAAGAAACTTATACAAGTA
AAAACCTATATAACTATAAGAGGTATTTAATAAACCCATTAAAAAGATAA
AACCCTGCGATATTATCAATATATGTATGTATGTATTTGACTTTTATTTA
CCCGATGAATTTCCCGGTCAATTTTCGGTCATTCATCTTAACATGGGGTT
ATTCTGAATAGTTTGAAAAGGATCTCATTGGGGTGATTTGATGGTTCTTT
GCCTCACTCTACGTTTGGAACTCGAACACGAAGGGGGTTAAATCTCGAGG
TAAAAGAACTGAACTGAGAAAAACAAAAGACCCGGACTGCACAACGCATA
ATAGATTTATGTCTTGTTTAAATGGGCTTTTCCAGAAAAAAACCGTGCAC
CCCCTGTTGAGGAGGTCCAACCTTTTGTGACCTACCCCCTTTGAATTCCA
GGCAATTTTAGGATCATACCCCTCTGGAATTCCGAATTTTTTACAAATTT
TCAATCATTACCCCCTTGGAATTCCGCTTATTTTTGACGGATTTTCGTCT
ACCCTTATGGAATTCCACTGCATTTCAAACCTTACCCCCTTGGAACGGAA
ATGGACCTCCTCAACAGGGGGTGCACGATTTTTTTCTGGAAAAGCCCAAT
AAAAAAAGCCCAATAAATTCTCAACTTTAGTTGAGCTAGAATCTGAGAAT
GTCTGTCTGTGTGTCTGTCACCAAAACTTTGGGGCAGGCTGGAGACTTCA
AAAATGGTTCGATTTGGCTGAAATTTTGCACAGTTGATCCTTGGGCAAAT
CCCTGGGGGTGTTTTTTTCATTTTTTCAAAATTTTAATTTTTGGGGCCTG
GGGACGAGCTTTTCGCCAAAACGAGGCTAAAACTTTGGGGCAGGCTGGAG
CCTTCAAAAATGGTCCGATTGGGCTGAAGTATTGCACACTTGATCCTTGG
GCAAATCCCTGGGGGTATTTTTTTCATTTTTTTTAAATTTTGATTTTTGG
GGCCTGGGGATGAGTTTTTCACCAAAACGAGGCCAAAACCCAAAATGCTA
TAATTTTTCTTAAGCCATTAAGTTTACAATTGAGCCTACGAATGATTTCA
AAGATACTGAAGTTGAGCCAGTGCGGTTAGCACGTTCGACAGTAAAGTAT
CAGCTGGACAAACAAAACCTTTTTGAAATTTTTTGTCATTTACGTTGGCT
CAAAATTATATCAAGTTATCATTAAAAATTGTTTTTCTTTTTGCATCACA
GGTGAGCATATTTTGTTCTGTTCAAGAAAATGAAACCGTGGGTGTTCAGA
ATTGATCCAAATGAGGTCACAGTGGATCTTAAGGGTTTTTTTCTCACTGT
CCGTTCGACTCTAACAAAATATTAATATATCATGCTGTCTTAAAATTCTT
GTGTTATGCTTGATTCAGCATTAAATTATTTGATTTAGTACAACACAAAA
AGTTACAGAGTTACAAAAGTTATAAAGTACACGTTTACACCAGTGACCGT
AATACAAGAGGTAGAGCATTCACCTACAGTATGCGAGGTCGTGAGTTCAA
ACTTGAGGAGAATATTCCAAGATTTTAAAAATGTTGCTCAATGTTTACGA
ATTAAGAGGGTTTGTTACACAAAAAAATTCCAGCTTAGGCGAATAAAATA
TGATATCGGGAGACTGAAAAAGAATCGTGTACTTTTTGGATAAAGAACAA
AAAGTATGGAATCATGCTTCTAAAAAATTAATTGTAACGTGGATGCCTGT
TTTTAGGTAGTCTAGTATGCTAGACGACTTAACTCAGTAAAAAATAGGAA
GTAGAAAACTTGAGCATCAATATAGTTTAATTTAACCATATCCCGACATA
AAAATTTCCCGCTTTCAACAAAAACGTTATAAACGACTGGATTCCCAGTC
TAGTTTTTAGGGTGCAAACCATACGGTGCTAATCGATAACCAATCGATAT
CAATCAATGTATTAGTTTTCGATTAGAATTGATAATCGACGTTATGCAAG
ATTATGATTATATATCACGACCGTCTTGTCCAAAATATTAAGGTAGGGGC
CCATTTACTTTAGAAGAAAAATTATCTTTGTACTAGATTAATAATTTATT
TTCACATATATCAACTCTGAAATAAAATGACTACTTTGTTACCCTAGCAA
CCACCCAGCAACCATTACTTTAAGGGCAGAAACTTTCGCGATTTCGCGTT
TTTCGCGATTTTGATCCTTTTCCGCGAAAGTTTCTGCCAGGTAAAAAATT
AAACCTGTCAGTTTTGCACTGTTTGCTAAATTTCTGCGTGTTCTTTGAGT
TTTTGTTACCAAAGAAGTTAAATTTTATATGTATTTGCAAAAGTTCTATC
TGTGAAATTTCGGCTAAAACCATAATTCGCGAAACTTAAATAGCTAAATT
TCGCGACTTTTTGACTTCGTGAAACTTTCTGCCCTTAAAGTATATCAAAA
ATATGCAAGTTCTTGTTTATCAAACTTCTCATCTATTCCTTATGAAATTT
CAATGGTATTTAGACAAAAGATAACCCTGGAGCCTGCCGCCATCATATAA
ATTATCTAAAATTGGACTTTGTTGTTAGAAAAATGATTTTTCGGTTGTCA
TAGAAATTGAATATTCAATAATATTTAAAAAATGTTGTAATTTCCTATTG
AAATATGGAAAATTGAAACATTTAAGCCATTTTCAAGGGTGGTGTATATG
TAAATTTGATCTAGAATTCAGTTAGTACTAGCTGTACTGAGTTTTAGTAG
GCATAGTGTTTTTTACTAACTACTTAACCCCCCCCCCTAATGCGATCACA
ACCTTGCAGTGGTTGTTGCAGTTAGGTACAATGTTCAACTTGTTATAGAT
TTCTATGGCAGCTTTAGTGCCTATATCAAAATGACAGATTGCGTCATGGA
CACCAAACACATTTCTACCAACAAAACACGTCATTGGCTGTGGTCATTAT
AAATTGGCTTAAAACATGTTTAATTATCTCAAGGGACAAAGCCAGGACCA
GGTTTATAAAGCTTAGTTCCATTTGCTTTGTCTCTTTGAGCGCCACACCA
GCTATCTGAACCCTTTGGGCAGTAAGCGCTATAATAGGGCGATTTCTCTG
AGGACGCAACATGAAAAAGACTTGCTAAATCCGACTTCTTCATTCCCTCC
AAGTTTCCAACATTCATCATCATTATCTTTCGATGTAGGTCCAAATGGAC
CTAGGTCGGAAATAAACAATAACCCTCCCTCCACATCTCTCGATTAGCCA
TTGCAGTACCCAGTTCCTCAATCTCTAGCCCTGTTTCCCGTTTCAAAATA
TCAAGAAATGTGCGCTTTCTCGAGCACCTAGGGCCCGCAGGACACCAAAG
TAAGAATTCTGACACGATTTCGTTTTTCGCACGGAAACAGTGACCTGAAA
AGGAGAGCATCCTGCTGGTCAAAACAGAAGATTCTTGGGAGTCCATGATA
GATCTCTTGAAGGGTTGGGTGGTTGCGCCAATCAAGATTCTGGACTCTTT
TCAAAAGGCTTCTATAACAGCCATCAAGGCTCTTCAGCATGGTTTTTGTC
ATGGTCGAAGTCTCCAAGCCATATAGAAGAATGGGCTCGACAAGACTTTC
AAAAGTTTGAAATCGTTTTCAGAGCTGTTAATATGAGAGCCAAGATATTT
GAAATCCTTCACAAGTTTGATATTGACACCATTCTTAGAAGTTAAAGGGA
GAACATTTCCTGAGGAGCTGATAAATTCAGTTTTTCCAGCATTACAATAA
AGACCAACTTGACGGGAACACCTTCAAAATTTTGAATAGTCTCAGAAACT
AAGGCAAGATCGTCAGCGAAGTCAAGATCGGTCAGAAAAAGGCCGCGGTT
ACGCTTGCGCAGGGGAGCTTTGATTTTGATTCTCTTGTCATTAGATAAGT
CAACAGAAATTCTTAAAACATAATCTAAAACAATGATAAAAAGAAAGGGA
GCTAAGGTGTCACCTTATAAAACTCAAGCATGAATGTCAAAAATAATAGT
GTCTCCGTCAGCTGTAATGACCTTTGCTTTGGTGGAGACGTAGAGTGCCC
TGATGGCTAAAATAATTTTTTCTGGAATACCGTACAATTTAAGAATTTCA
AACATTCAAGATGCGAAAAATTGATTTCAGAATCATCGAATTTTTCAGTT
TTTCAAAAAAGGGGATATTGACGTTTTCTCTGAAAAATCGTGTCGTTTCC
CTCATCGCGAAAACGCTAGTAAGTAAGTACCCACATTGAGTTGTATTATT
ACTAGTTTGCTAAAAAGCTTCATTCAAGAATGACAGGGTTTTGAATCAGT
TTATTGGTTGTAGGTCTTCAAACAAGATAGTGGATTAGCCGGCACTAAAA
TTGGTAGCAATTTCGGTCCAGTCAAGTAGTAGTACATCAGTGGTTGTAAA
TTAGGACATGGGGGGGGGGTGAATTACTAGAAATAATAATGCACAAATTT
CTCCCAATAGGTCGATGGATTAATCACAATGCTAAAACAGGAGTCTGAAG
AAAACCCGCGCCGTAAACACCTTGTCGTTTCTCAATTTGCACAATTTCTC
AACCTCCTTGAAAAGCCGATACAAGAATCCGGATACAAGTTTGTCCGGTT
GGATGGTTCCATGACCATGAAACAACGAACAGATGCTATAACCCGATTTT
CTGATAAATCCGATAATTCCCCGACTATCATGTTGTTGTCGTTGAAGGCA
GGGGGTGTCGGATTAAATCTGACGGCTGCTACTCGCGTTTTCCTTATGGA
CCCTGTAAGTTTTCTCTGGATTTCTTGTTTTGGTTTTGACTTCAATTTGC
TCATACAGGAATAAAGGCTGAATGAAGGTCCTCAGCTGAAAATGCATCAT
TTGACGATCGTCCTATTATATGACATGGTGTTTCCGGATCATGATTTAAA
AAGCCCGAAGGGCTAGATGTCGTGCTTCGGCTGAAAAGTGTGCCGTGGTT
AGGTAGGAAATCCTACCTAGGTCACGTGACATTACAATAGAATTCCATCG
CTTGACCAATCAGAAGCTTCGCAGGCTTTCGAAAACAATAGCAACAATAT
TTTTCCGATATTCAATTTTTTTTTTGCCCGTGATGGCTAAAAAGCACGAC
ATCCAGCCCTTCGGGTTTTATAAATTTGTGTTCCCGATAAGGAAACATTT
TGACATCCAGACATTTATTGGTGATGTATGAGGATAGATTTTGACTTAAA
CACGGTATTTACCAGGCGCTAGTATGATTCCTCGACGAGTATTATGTCAA
CTCCTGGACAGCTTTATACTTCCGACAGGGTTTAGACACACTCTGGAAAC
TTTGTCAATGTCTGAGGGTATGTTTTGACTTTTACGTAGTTTTTAGTTTT
ATACTCTTTAATCCCAACCCCCTAGAATATACTCTTGACAGGGTTTAGAC
AGGCCTTGGGAAACCTGACAATTGAAGTATATTATGAAACATAATGGCAG
ATTATATTCCCCGATCGCGGTATAAAGCTTCACTAACAAATTTACATACC
TAAGTTAGGATTGAAATAGAATCTACTATACACTGTATTGCCTGAAGATT
GTGTCAGAATGAAACACAGTGTAGCGATTGTAAGTTAGTTCTTTATTTCT
CGATATACCTTAGTCGCAGCACAATTAAAGGTTACCCTCGACTGATATAC
CTGGAGATTTTCCCCATACATAGTAGTAATGAAAGTCGCTCATCTTTATT
TCTCAGGCATGGAACCCTGCATCGGAAGATCAGTGTTTCGATCGATGTCA
TCGCCTTGGTCAAACAGAAGAAGTCAAAGTATACAAGGTATCTTTCATAA
TTTGCGCAACAATGCCAGCTTCACGCCTCACTTTCTTCTTTTCTTCTTAA
GCTTTTTTATCATTCTCTCCCGTCAAATTATGATGCTAAAAGTATCTAAC
TACGCGTCTTGTATTAAAAACTAGTTTTCATGAATCTGCTATTGCCACTA
GGAAATTGTATATTTTGACTTTACATTTTTTTCGGACACATTCGTACGTT
ATTTCTATTATCTCTTTTTCTGGAAAAGTTCGTCGTCAAAAACACAGTGG
AAGAGAAGATGTTGGAATTACAAGACAAAAAACGAGACATGATGAAACGA
ACGTTCGGACCAAAACAATCGAGCAAAGACCGACAGAAAATGCGCATAGA
AGATGTCCAAACACTATTTTCATAAGACTCTTGTTACATGCTGCAATATT
CGGTGCACCCACGGATCCTAAAGTTGGATATACATTTACGGTAAATGCTT
GCCTTCCATTATGCCTTCCATTATGACATATGTAACGTGAACCGGACGTC
GAAACAACGTGTTTCCACTGGGTCCTAGAGAAGTTAACCATACATTTTTA
CATGCATTTCTTTGTTGATCATAATTTGGTCAGGGGCGGTCATTCTGTTC
AGAATACATCCAATAATTTTCTCTCCAGAGCCGATGAGTTATAGATTTTA
ATCATGGCAAGAAATTTGTCTTAAAATGGTATTTTACGGTACAATAAAAC
TTTTGTTTAAGAATATTTGTGTTTTGGGTGGTTTGCCATCCATACAAAGT
CTATCTTTGCTTTTTAAAGTTTTTCTGATTTATTTGAGTTGTATACTTTA
CCATGTATTTTTAGTTAGAGATATTTTTTAAGTTTTACTTTTCTTTTATT
ACATGTATTTACTTAGACAGTGAAAAAATGAAGATTTATTGTATAACTGA
TGTTTAGGGCGCCCATTATTGTAGGGGTTCGAAATACCGTTTTCCCGTCA
AAATTTTTGTTGAATCCCGAAAATTGAAAAAAATAGTAACACCGTCACAC
CGGTTTGTAGAGGTTAAAATACCGGCATAATGACAAAAAATAAGGCTAAA
TACCGTCACCGTCTGATTTTAAAATACCGTTTTCCCGTCTCTTTTTTCGT
CAAATCCCATAATACCCCTCCCTCCCTATTATATGATATTTCGACCGATT
TTGACCTATCATTTTATTTCTTCGTGACCCTCACTCCCCTCACCAGACCC
TTTCGATTATTCTCTTGAGTACATTTATAAACTTATTTTTTGTGTTAATA
TTTAGATATTTTGAAAGTTAGAATAGTTTTTATGTTGATACACGTTTTTT
TACTTACGTTGTAAATACTTGACATCATATTTTTTTGAAGACATGAAACC
CGTTAGTTTGTGAGTTTCGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028810-exon-sc0000705-1575043694:55371..55494 | TCONS_00028810-exon-sc0000705-1575043694:55371..55494 | Clytia hemisphaerica | exon |
| TCONS_00028810-exon-sc0000705-1575043694:54306..54464 | TCONS_00028810-exon-sc0000705-1575043694:54306..54464 | Clytia hemisphaerica | exon |
| TCONS_00028810-exon-sc0000705-1575043694:53372..53520 | TCONS_00028810-exon-sc0000705-1575043694:53372..53520 | Clytia hemisphaerica | exon |
| TCONS_00028810-exon-sc0000705-1575043694:43091..43384 | TCONS_00028810-exon-sc0000705-1575043694:43091..43384 | Clytia hemisphaerica | exon |
| TCONS_00028810-exon-sc0000705-1575043694:42058..42138 | TCONS_00028810-exon-sc0000705-1575043694:42058..42138 | Clytia hemisphaerica | exon |
| TCONS_00028810-exon-sc0000705-1575043694:40675..41816 | TCONS_00028810-exon-sc0000705-1575043694:40675..41816 | Clytia hemisphaerica | exon |
| TCONS_00028810-exon-sc0000705-1510915933:55371..55494 | TCONS_00028810-exon-sc0000705-1510915933:55371..55494 | Clytia hemisphaerica | exon |
| TCONS_00028810-exon-sc0000705-1510915933:54306..54464 | TCONS_00028810-exon-sc0000705-1510915933:54306..54464 | Clytia hemisphaerica | exon |
| TCONS_00028810-exon-sc0000705-1510915933:53372..53520 | TCONS_00028810-exon-sc0000705-1510915933:53372..53520 | Clytia hemisphaerica | exon |
| TCONS_00028810-exon-sc0000705-1510915933:43091..43384 | TCONS_00028810-exon-sc0000705-1510915933:43091..43384 | Clytia hemisphaerica | exon |
| TCONS_00028810-exon-sc0000705-1510915933:42058..42138 | TCONS_00028810-exon-sc0000705-1510915933:42058..42138 | Clytia hemisphaerica | exon |
| TCONS_00028810-exon-sc0000705-1510915933:40675..41816 | TCONS_00028810-exon-sc0000705-1510915933:40675..41816 | Clytia hemisphaerica | exon |
| TCONS_00028810-exon-sc0000705-1491911889:55371..55494 | TCONS_00028810-exon-sc0000705-1491911889:55371..55494 | Clytia hemisphaerica | exon |
| TCONS_00028810-exon-sc0000705-1491911889:54306..54464 | TCONS_00028810-exon-sc0000705-1491911889:54306..54464 | Clytia hemisphaerica | exon |
| TCONS_00028810-exon-sc0000705-1491911889:53372..53520 | TCONS_00028810-exon-sc0000705-1491911889:53372..53520 | Clytia hemisphaerica | exon |
| TCONS_00028810-exon-sc0000705-1491911889:43091..43384 | TCONS_00028810-exon-sc0000705-1491911889:43091..43384 | Clytia hemisphaerica | exon |
| TCONS_00028810-exon-sc0000705-1491911889:42058..42138 | TCONS_00028810-exon-sc0000705-1491911889:42058..42138 | Clytia hemisphaerica | exon |
| TCONS_00028810-exon-sc0000705-1491911889:40675..41816 | TCONS_00028810-exon-sc0000705-1491911889:40675..41816 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000705 | supercontig | sc0000705:40675..55494 - |
Blast
BLAST of TCONS_00028810 vs. Swiss-Prot (Human)
Match: HLTF (Helicase-like transcription factor OS=Homo sapiens GN=HLTF PE=1 SV=2) HSP 1 Score: 298.13 bits (762), Expect = 5.579e-88 Identity = 149/294 (50.68%), Postives = 206/294 (70.07%), Query Frame = 1
Query: 79 CLILTVTDSASMYNRGASQTPEKLMMKLQQILTVLLSSG-DEECPICLDAFNNPVITHCAHLYCRPCIEGVIRADKP--KCPLCRNDISKEKLVKPAAEKDDIINGEGGGAKQATWSSSSKVDGLITMLKQESEENPRRKHLVVSQFAQFLNLLEKPIQESGYKFVRLDGSMTMKQRTDAITRFSDKSDNSPTIMLLSLKAGGVGLNLTAATRVFLMDPAWNPASEDQCFDRCHRLGQTEEVKVYKFVVKNTVEEKMLELQDKKRDMMKRTFGPKQSSKDRQKM-RIEDVQTLF 948
C +T++ S + TPE+L KL + + ++LSSG DEEC ICLD+ PVITHCAH++C+PCI VI+ ++P KCPLCRNDI ++ L++ E+ + + W+SSSK++ L+ L ++NP K LVVSQF FL+L+E P++ SG+ F RLDGSM K+R ++I F + SPTIMLLSLKAGGVGLNL+AA+RVFLMDPAWNPA+EDQCFDRCHRLGQ +EV + KF+VK++VEE ML++Q+KKR++ FG K+ + D K +I +++TL
Sbjct: 717 CHTYLLTNAVSSNGPSGNDTPEELRKKLIRKMKLILSSGSDEECAICLDSLTVPVITHCAHVFCKPCICQVIQNEQPHAKCPLCRNDIHEDNLLECPPEE---LARDSEKKSDMEWTSSSKINALMHALTDLRKKNPNIKSLVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSLKAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENMLKIQNKKRELAAGAFGTKKPNADEMKQAKINEIRTLI 1007
The following BLAST results are available for this feature:
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