TCONS_00029042 (transcript) - C. hemisphaerica

Overview
NameTCONS_00029042
Unique NameTCONS_00029042
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2046

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00029042 ID=TCONS_00029042|Name=TCONS_00029042|organism=Clytia hemisphaerica|type=transcript|length=2046bp
GTTGCTGTATGCAAAGAAAGAAAGACTGCGTGTGTTTGTTCGTTTTGTGG
ATAAATATTTCAAGCTGAGCGTCTAAAATAAGCTTTAGTTTTCAAGAGTG
TTTTGACAGCAAGCTGCTAGCAAAGATGCTAACCAGATTATTATTTTTCG
TTGCTTTGATTAACATTTCTTTATCCAGTGTTTTATATAGAGATGAGTAT
GGGAACTTAGTGCGATACGAAGGACGAAACGATCAACTAAACGTGTACCA
ACGACCAAACCAACAACAACCTTCAGATACATATTATCGTCAAAACAGAG
CTCCTTCATTCAATGATTACTACCGACGTAAGCAACTCGATGATTTCTTC
AAACAATTAGAGAGGAATGCTGATAACAGATTGCCACATCGTCAACAAGG
CTGGGGAGATACTAGAAAGAATCCAGAAGAGACAGTAGAGCTTGGAAAAC
CTTTGACCAACAAAGATGTGTCAAAGAGCAAAGatAACGCTGAAAAGGCG
AAAGTTGTAATTCCAGAAGATTCTCTCAAAGCAAAGAAGGCCGAAACTGC
ATCAAAGGATTCAAACAAACCTTCGCCAAACCTTAGCAAGAAAGTAAAAG
TAGAAGATCATGCTGTTGAAAAGAAGACAAACAAAGCTGTtcctgaaaag
aagaaagatgcTGTGCAAAAGAAAGTTGGAAAGGAAAAGTATGTTGATAG
TCTGTTCGATGATGAGGATTTGGTTGAGGAGAAGAAGGAGACAACTAAGA
AGGATGAGGAGAAGAAGACGATTGTATCCAAAGATGAAGTGAAGAAGACT
GTATCCAAAGATGAAGTGAAGAAGACGGTATCCAAAGATGAAGTGAAGAA
GACAGTATCCAAAGATGAAGTGAAGAAGACGGTATCCAAAGATGAAGTGA
AGAAGACTGTATCCAAAGATGAAGTGAAAAGCTCAACGAACGATGAAACG
AAGAAGTCTTCCAAAGATGCACCAAAAGCACCAGAAGACAAAAAGGAGGT
GGAGTCTGATGTTCCCAAGAAGGTTCAACTAAAGGTTGCTGACCCAAAGA
AATCCTCTAAcctcaaaatcatcaaattgaATGATAGTGACAAGTTCAAG
AAAATTGATCATTTATTCAAAGACCTTTTTAAGAAGGATGAACTTCCATC
TACCAAGGACTCTGCCAGACCAACAAGATACGACAATCTAATCCCAAAAA
AATCTGATGGCAAACTTTCCGATCACCAACAAAAACTGTACGATGAATAC
CGCAGGATGATGGATGAAAGATTTAACAGATTGGACCAACGTGACCAAGC
AATGCGTGCCCAACGTTACGATAACCGTAGACCAGTGTATTCAGATCCCC
GACGCCAACAACAGTACAAACAAATCCGTCAAAGGCTTAGTCAGCAATAT
GACACGCCACACAACCGTTTGCTTTTCAATAACCGTTTCAACGACTACCA
AAGACGTCAAGATGACGTACGTCGTTACGATTTAGATCAACGTCGTCGAA
GTTTAATCGAGGACTATCGTAAAAGACTCACCAACGATTTTCAACAGCAA
ATGAATCACCATGACTACCCTCGTCAACAAGCAAGAAGATGGGGTGATGC
TCCAGCACGTCACAACCCTTTATACATACCACAACAAGGTCAAGAACGTA
ACTACCGTTTCGATACTGTTCAGCGACGTCCAAAATACATTTAAACAGTC
ATAACTGACAATGAATGATAGTATAAAGAACAGGAAGACCATTTTCTGAA
GTTTCAGTTTTGGTGAGGGCTTAGTGTTTAAGATACTGTAAATCTTGATA
TTTTGTTGtatgtttttttgaatttttttttgtatattttcgtatttttt
tagCTCACTTGTATGTTAACAACGTTGTCccgttttaaaaattttgtcac
aaaacaaatttctttgaGGTTTAAGAtcttttatcatgtttttttaaCAA
ATCTTTTTAACATAACTATACAGACTCAGTTAGGTCTGTTCCGAACATGG
ATGCTGGGTATGTACGGACGGTACAGTAAGGCTCTCTAtaggtcgg
Run BLAST on NCBI

protein sequence of TCONS_00029042-protein

>TCONS_00029042-protein ID=TCONS_00029042-protein|Name=TCONS_00029042-protein|organism=Clytia hemisphaerica|type=polypeptide|length=522bp
MLTRLLFFVALINISLSSVLYRDEYGNLVRYEGRNDQLNVYQRPNQQQPS
DTYYRQNRAPSFNDYYRRKQLDDFFKQLERNADNRLPHRQQGWGDTRKNP
EETVELGKPLTNKDVSKSKDNAEKAKVVIPEDSLKAKKAETASKDSNKPS
PNLSKKVKVEDHAVEKKTNKAVPEKKKDAVQKKVGKEKYVDSLFDDEDLV
EEKKETTKKDEEKKTIVSKDEVKKTVSKDEVKKTVSKDEVKKTVSKDEVK
KTVSKDEVKKTVSKDEVKSSTNDETKKSSKDAPKAPEDKKEVESDVPKKV
QLKVADPKKSSNLKIIKLNDSDKFKKIDHLFKDLFKKDELPSTKDSARPT
RYDNLIPKKSDGKLSDHQQKLYDEYRRMMDERFNRLDQRDQAMRAQRYDN
RRPVYSDPRRQQQYKQIRQRLSQQYDTPHNRLLFNNRFNDYQRRQDDVRR
YDLDQRRRSLIEDYRKRLTNDFQQQMNHHDYPRQQARRWGDAPARHNPLY
IPQQGQERNYRFDTVQRRPKYI
Run BLAST on NCBI

transcript from alignment at sc0000723:16625..19911+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00029042 ID=TCONS_00029042|Name=TCONS_00029042|organism=Clytia hemisphaerica|type=transcript|length=3287bp|location=Sequence derived from alignment at sc0000723:16625..19911+ (Clytia hemisphaerica)
GTTGCTGTATGCAAAGAAAGAAAGACTGCGTGTGTTTGTTCGTTTTGTGG
ATAAATATTTCAAGCTGAGCGTCTAAAATAAGCTTTAGTTTTCAAGAGTG
TTTTGACAGCAAGCTGCTAGCAAAGATGCTAACCAGATTATTATTTTTCG
TTGCTTTGATTAACATTTCTTTATCCAGTGTTTTATATAGAGgtatgtat
tttttgttttgattttatttttaatgataAGAAGGTATACTTAATATTTT
CTAAGGGAGCGCTGTTGTTATTATCCAGGGTGTAATCTTTTTTGTTAGAA
GCGGCGTCGAGGTTCATTTTGATAACCAATATGGTGCTAATTTTAGCGTG
ATAGCCTCTTATAAAGTAAAAGAACTCGAAAATGCTTGAGAACAAGAACA
AGAATACCTTTCCCTAAAGTCAATACTTCAAATTCCCTAAAGTCAATACT
TCAAATTCCCTAAAGTCAATACTTCAAATTCCCTAAAGTCAATActtcaa
aagtttttcccaggcgagaaatttttcaattttaaatcatTTCAATGAGT
GCATTAGGATTTCTATATAAAGTACGCAGCAATCGAGCCTTACACTTTGA
ACGTAAATAAAAAACCAAAATGAATCCAATAGCATTTTTGTCCGAAATCT
CCTGATAAACCATGGAAATCAAATTGATTAACATCCTTATAGAcatcaaa
ataaattctttaTTTCAAAACCCTTTTTACATTTCCCTATGTTGTAACTT
GTATAATCTAACTTCTTTTTTTGCATCGTTACAGATGAGTATGGGAACTT
AGTGCGATACGAAGGACGAAACGATCAACTAAACGTGTACCAACGACCAA
ACCAACAACAACCTTCAGATACATATTATCGTCAAAACAGAGCTCCTTCA
TTCAATGATTACTACCGACGTAAGCAACTCGATGATTTCTTCAAACAATT
AGAGAGGAATGCTGATAACAGATTGCCACATCGTCAACAAGGCTGGGGAG
ATACTAGAAAGAATCCAGAAGAGACAGTAGAGCTTGGAAAACCTTTGACC
AACAAAGATGTGTCAAAGAGCAAAGGTATTCATCTAGATAAAAACAGTTT
GGTCGTGTGtaacccctgtctcagtgatccATGGATGGTATACAGTAGAT
ACTGTTAAAGGCCTGAATACCAATGATTTTGTGTGTAGTAATATCAAGTT
ACTCTGATCGACAATATTTCACAGCTCCTCAAGGGGAAGAGATGCATTTA
GGAAGTATTTCCCATTGGTTTCAAAGCCCCGAAGGAGTTAGATACGAAAC
TCCTGAATAGGAAATGAAGTCACGTATTTCCCAAACTAAACATAGTCTTT
AAAACATAGTcacataaaattttgaatgccGGGCAAATCCTAAGGCTTCG
CTTTTTCTTGCTCGAGAAAGGTTGAGATTCGGCTCTAGCGCACTCAATGG
TATATGTTCCTTTTTTGCctcgattcttataaaaaatcatagTCCTATTT
TTAACCTCGTGGGATTTCCAATCGACGTACATTACGCTTTAGAatcaata
ttttgttttctttagatAACGCTGAAAAGGCGAAAGTTGTAATTCCAGAA
GATTCTCTCAAAGCAAAGAAGGCCGAAACTGCATCAAAGGATTCAAACAA
ACCTTCGCCAAACCTTAGCAAGAAAGTAAAAGTAGAAGATCATGCTGTTG
AAAAGAAGACAAACAAAGCTGTtcctgaaaagaagaaagatgcTGTGCAA
AAGAAAGTTGGAAAGGAAAAGTATGTTGATAGTCTGTTCGATGATGAGGA
TTTGGTTGAGGAGAAGAAGGAGACAACTAAGAAGGATGAGGAGAAGAAGA
CGATATCCAAAGATGAAGTGAAGAAGACAGTATCCAAAGATGAAGTGAAG
AAGACTGTATCCAAAGATGAAGTGAAGAAGACTGTATCCAAAGATGAAGT
GAAGAAGACAGTATCCAAAGATGAAGTGAAGAAGACGGTATCCAAAGATG
AAGTGAAGAAGACTGTATCCAAAGATGAAGTGAAGAAGACTGTATCCAAA
GATGAAGTGAAGAAGACGGTATCCAAAGATGAAGTGAAGAAGACAGTATC
CAAAGATGAAGTGAAGAAGACGGTATCCAAAGATGAAGTGAAGAAGACTG
TATCCAAAGATGAAGTGAAAAGCTCAACGAACGATGAAACGAAGAAGTCT
TCCAAAGATGCACCAAAAGCACCAGAAGACAAAAAGGAGGTGGAGTCTGA
TGTTCCCAAGAAGGTTCAACTAAAGGTTGCTGACCCAAAGAAATCCTCTA
AcctcaaaatcatcaaattgaATGATAGTGACAAGTTCAAGAAAATTGAT
CATTTATTCAAAGACCTTTTTAAGAAGGATGAACTTCCATCTACCAAGGA
CTCTGCCAGACCAACAAGATACGACAATCTAATCCCAAAAAAATCTGATG
GCAAACTTTCCGATCACCAACAAAAACTGTACGATGAATACCGCAGGATG
ATGGATGAAAGATTTAACAGATTGGACCAACGTGACCAAGCAATGCGTGC
CCAACGTTACGATAACCGTAGACCAGTGTATTCAGATCCCCGACGCCAAC
AACAGTACAAACAAATCCGTCAAAGGCTTAGTCAGCAATATGACACGCCA
CACAACCGTTTGCTTTTCAATAACCGTTTCAACGACTACCAAAGACGTCA
AGATGACGTACGTCGTTACGATTTAGATCAACGTCGTCGAAGTTTAATCG
AGGACTATCGTAAAAGACTCACCAACGATTTTCAACAGCAAATGAATCAC
CATGACTACCCTCGTCAACAAGCAAGAAGATGGGGTGATGCTCCAGCACG
TCACAACCCTTTATACATACCACAACAAGGTCAAGAACGTAACTACCGTT
TCGATACTGTTCAGCGACGTCCAAAATACATTTAAACAGTCATAACTGAC
AATGAATGATAGTATAAAGAACAGGAAGACCATTTTCTGAAGTTTCAGTT
TTGGTGAGGGCTTAGTGTTTAAGATACTGTAAATCTTGATATTTTGTTGt
atgtttttttgaatttttttttgtatattttcgtatttttttagCTCACT
TGTATGTTAACAACGTTGTCccgttttaaaaattttgtcacaaaacaaat
ttctttgaGGTTTAAGAtcttttatcatgtttttttaaCAAATCTTTTTA
ACATAACTATACAGACTCAGTTAGGTCTGTTCCGAACATGGATGCTGGGT
ATGTACGGACGGTACAGTAAGGCTCTCTAtaggtcgg

Coding sequence (CDS) from alignment at sc0000723:16625..19911+

>TCONS_00029042 ID=TCONS_00029042|Name=TCONS_00029042|organism=Clytia hemisphaerica|type=CDS|length=6276bp|location=Sequence derived from alignment at sc0000723:16625..19911+ (Clytia hemisphaerica)
ATGCTAACCAGATTATTATTTTTCGTTGCTTTGATTAACATTTCTTTATC
CAGTGTTTTATATAGAGATGAGTATGGGAACTTAGTGCGATACGAAGGAC
GAAACGATCAACTAAACGTGTACCAACGACCAAACCAACAACAACCTTCA
GATACATATTATCGTCAAAACAGAGCTCCTTCATTCAATGATTACTACCG
ACGTAAGCAACTCGATGATTTCTTCAAACAATTAGAGAGGAATGCTGATA
ACAGATTGCCACATCGTCAACAAGGCTGGGGAGATACTAGAAAGAATCCA
GAAGAGACAGTAGAGCTTGGAAAACCTTTGACCAACAAAGATGTGTCAAA
GAGCAAAGatAACGCTGAAAAGGCGAAAGTTGTAATTCCAGAAGATTCTC
TCAAAGCAAAGAAGGCCGAAACTGCATCAAAGGATTCAAACAAACCTTCG
CCAAACCTTAGCAAGAAAGTAAAAGTAGAAGATCATGCTGTTGAAAAGAA
GACAAACAAAGCTGTtcctgaaaagaagaaagatgcTGTGCAAAAGAAAG
TTGGAAAGGAAAAGTATGTTGATAGTCTGTTCGATGATGAGGATTTGGTT
GAGGAGAAGAAGGAGACAACTAAGAAGGATGAGGAGAAGAAGACGATTGT
ATCCAAAGATGAAGTGAAGAAGACTGTATCCAAAGATGAAGTGAAGAAGA
CGGTATCCAAAGATGAAGTGAAGAAGACAGTATCCAAAGATGAAGTGAAG
AAGACGGTATCCAAAGATGAAGTGAAGAAGACTGTATCCAAAGATGAAGT
GAAAAGCTCAACGAACGATGAAACGAAGAAGTCTTCCAAAGATGCACCAA
AAGCACCAGAAGACAAAAAGGAGGTGGAGTCTGATGTTCCCAAGAAGGTT
CAACTAAAGGTTGCTGACCCAAAGAAATCCTCTAAcctcaaaatcatcaa
attgaATGATAGTGACAAGTTCAAGAAAATTGATCATTTATTCAAAGACC
TTTTTAAGAAGGATGAACTTCCATCTACCAAGGACTCTGCCAGACCAACA
AGATACGACAATCTAATCCCAAAAAAATCTGATGGCAAACTTTCCGATCA
CCAACAAAAACTGTACGATGAATACCGCAGGATGATGGATGAAAGATTTA
ACAGATTGGACCAACGTGACCAAGCAATGCGTGCCCAACGTTACGATAAC
CGTAGACCAGTGTATTCAGATCCCCGACGCCAACAACAGTACAAACAAAT
CCGTCAAAGGCTTAGTCAGCAATATGACACGCCACACAACCGTTTGCTTT
TCAATAACCGTTTCAACGACTACCAAAGACGTCAAGATGACGTACGTCGT
TACGATTTAGATCAACGTCGTCGAAGTTTAATCGAGGACTATCGTAAAAG
ACTCACCAACGATTTTCAACAGCAAATGAATCACCATGACTACCCTCGTC
AACAAGCAAGAAGATGGGGTGATGCTCCAGCACGTCACAACCCTTTATAC
ATACCACAACAAGGTCAAGAACGTAACTACCGTTTCGATACTGTTCAGCG
ACGTCCAAAATACATTTAAATGCTAACCAGATTATTATTTTTCGTTGCTT
TGATTAACATTTCTTTATCCAGTGTTTTATATAGAGATGAGTATGGGAAC
TTAGTGCGATACGAAGGACGAAACGATCAACTAAACGTGTACCAACGACC
AAACCAACAACAACCTTCAGATACATATTATCGTCAAAACAGAGCTCCTT
CATTCAATGATTACTACCGACGTAAGCAACTCGATGATTTCTTCAAACAA
TTAGAGAGGAATGCTGATAACAGATTGCCACATCGTCAACAAGGCTGGGG
AGATACTAGAAAGAATCCAGAAGAGACAGTAGAGCTTGGAAAACCTTTGA
CCAACAAAGATGTGTCAAAGAGCAAAGatAACGCTGAAAAGGCGAAAGTT
GTAATTCCAGAAGATTCTCTCAAAGCAAAGAAGGCCGAAACTGCATCAAA
GGATTCAAACAAACCTTCGCCAAACCTTAGCAAGAAAGTAAAAGTAGAAG
ATCATGCTGTTGAAAAGAAGACAAACAAAGCTGTtcctgaaaagaagaaa
gatgcTGTGCAAAAGAAAGTTGGAAAGGAAAAGTATGTTGATAGTCTGTT
CGATGATGAGGATTTGGTTGAGGAGAAGAAGGAGACAACTAAGAAGGATG
AGGAGAAGAAGACGATTGTATCCAAAGATGAAGTGAAGAAGACTGTATCC
AAAGATGAAGTGAAGAAGACGGTATCCAAAGATGAAGTGAAGAAGACAGT
ATCCAAAGATGAAGTGAAGAAGACGGTATCCAAAGATGAAGTGAAGAAGA
CTGTATCCAAAGATGAAGTGAAAAGCTCAACGAACGATGAAACGAAGAAG
TCTTCCAAAGATGCACCAAAAGCACCAGAAGACAAAAAGGAGGTGGAGTC
TGATGTTCCCAAGAAGGTTCAACTAAAGGTTGCTGACCCAAAGAAATCCT
CTAAcctcaaaatcatcaaattgaATGATAGTGACAAGTTCAAGAAAATT
GATCATTTATTCAAAGACCTTTTTAAGAAGGATGAACTTCCATCTACCAA
GGACTCTGCCAGACCAACAAGATACGACAATCTAATCCCAAAAAAATCTG
ATGGCAAACTTTCCGATCACCAACAAAAACTGTACGATGAATACCGCAGG
ATGATGGATGAAAGATTTAACAGATTGGACCAACGTGACCAAGCAATGCG
TGCCCAACGTTACGATAACCGTAGACCAGTGTATTCAGATCCCCGACGCC
AACAACAGTACAAACAAATCCGTCAAAGGCTTAGTCAGCAATATGACACG
CCACACAACCGTTTGCTTTTCAATAACCGTTTCAACGACTACCAAAGACG
TCAAGATGACGTACGTCGTTACGATTTAGATCAACGTCGTCGAAGTTTAA
TCGAGGACTATCGTAAAAGACTCACCAACGATTTTCAACAGCAAATGAAT
CACCATGACTACCCTCGTCAACAAGCAAGAAGATGGGGTGATGCTCCAGC
ACGTCACAACCCTTTATACATACCACAACAAGGTCAAGAACGTAACTACC
GTTTCGATACTGTTCAGCGACGTCCAAAATACATTTAAATGCTAACCAGA
TTATTATTTTTCGTTGCTTTGATTAACATTTCTTTATCCAGTGTTTTATA
TAGAGATGAGTATGGGAACTTAGTGCGATACGAAGGACGAAACGATCAAC
TAAACGTGTACCAACGACCAAACCAACAACAACCTTCAGATACATATTAT
CGTCAAAACAGAGCTCCTTCATTCAATGATTACTACCGACGTAAGCAACT
CGATGATTTCTTCAAACAATTAGAGAGGAATGCTGATAACAGATTGCCAC
ATCGTCAACAAGGCTGGGGAGATACTAGAAAGAATCCAGAAGAGACAGTA
GAGCTTGGAAAACCTTTGACCAACAAAGATGTGTCAAAGAGCAAAGatAA
CGCTGAAAAGGCGAAAGTTGTAATTCCAGAAGATTCTCTCAAAGCAAAGA
AGGCCGAAACTGCATCAAAGGATTCAAACAAACCTTCGCCAAACCTTAGC
AAGAAAGTAAAAGTAGAAGATCATGCTGTTGAAAAGAAGACAAACAAAGC
TGTtcctgaaaagaagaaagatgcTGTGCAAAAGAAAGTTGGAAAGGAAA
AGTATGTTGATAGTCTGTTCGATGATGAGGATTTGGTTGAGGAGAAGAAG
GAGACAACTAAGAAGGATGAGGAGAAGAAGACGATTGTATCCAAAGATGA
AGTGAAGAAGACTGTATCCAAAGATGAAGTGAAGAAGACGGTATCCAAAG
ATGAAGTGAAGAAGACAGTATCCAAAGATGAAGTGAAGAAGACGGTATCC
AAAGATGAAGTGAAGAAGACTGTATCCAAAGATGAAGTGAAAAGCTCAAC
GAACGATGAAACGAAGAAGTCTTCCAAAGATGCACCAAAAGCACCAGAAG
ACAAAAAGGAGGTGGAGTCTGATGTTCCCAAGAAGGTTCAACTAAAGGTT
GCTGACCCAAAGAAATCCTCTAAcctcaaaatcatcaaattgaATGATAG
TGACAAGTTCAAGAAAATTGATCATTTATTCAAAGACCTTTTTAAGAAGG
ATGAACTTCCATCTACCAAGGACTCTGCCAGACCAACAAGATACGACAAT
CTAATCCCAAAAAAATCTGATGGCAAACTTTCCGATCACCAACAAAAACT
GTACGATGAATACCGCAGGATGATGGATGAAAGATTTAACAGATTGGACC
AACGTGACCAAGCAATGCGTGCCCAACGTTACGATAACCGTAGACCAGTG
TATTCAGATCCCCGACGCCAACAACAGTACAAACAAATCCGTCAAAGGCT
TAGTCAGCAATATGACACGCCACACAACCGTTTGCTTTTCAATAACCGTT
TCAACGACTACCAAAGACGTCAAGATGACGTACGTCGTTACGATTTAGAT
CAACGTCGTCGAAGTTTAATCGAGGACTATCGTAAAAGACTCACCAACGA
TTTTCAACAGCAAATGAATCACCATGACTACCCTCGTCAACAAGCAAGAA
GATGGGGTGATGCTCCAGCACGTCACAACCCTTTATACATACCACAACAA
GGTCAAGAACGTAACTACCGTTTCGATACTGTTCAGCGACGTCCAAAATA
CATTTAAATGCTAACCAGATTATTATTTTTCGTTGCTTTGATTAACATTT
CTTTATCCAGTGTTTTATATAGAGATGAGTATGGGAACTTAGTGCGATAC
GAAGGACGAAACGATCAACTAAACGTGTACCAACGACCAAACCAACAACA
ACCTTCAGATACATATTATCGTCAAAACAGAGCTCCTTCATTCAATGATT
ACTACCGACGTAAGCAACTCGATGATTTCTTCAAACAATTAGAGAGGAAT
GCTGATAACAGATTGCCACATCGTCAACAAGGCTGGGGAGATACTAGAAA
GAATCCAGAAGAGACAGTAGAGCTTGGAAAACCTTTGACCAACAAAGATG
TGTCAAAGAGCAAAGatAACGCTGAAAAGGCGAAAGTTGTAATTCCAGAA
GATTCTCTCAAAGCAAAGAAGGCCGAAACTGCATCAAAGGATTCAAACAA
ACCTTCGCCAAACCTTAGCAAGAAAGTAAAAGTAGAAGATCATGCTGTTG
AAAAGAAGACAAACAAAGCTGTtcctgaaaagaagaaagatgcTGTGCAA
AAGAAAGTTGGAAAGGAAAAGTATGTTGATAGTCTGTTCGATGATGAGGA
TTTGGTTGAGGAGAAGAAGGAGACAACTAAGAAGGATGAGGAGAAGAAGA
CGATTGTATCCAAAGATGAAGTGAAGAAGACTGTATCCAAAGATGAAGTG
AAGAAGACGGTATCCAAAGATGAAGTGAAGAAGACAGTATCCAAAGATGA
AGTGAAGAAGACGGTATCCAAAGATGAAGTGAAGAAGACTGTATCCAAAG
ATGAAGTGAAAAGCTCAACGAACGATGAAACGAAGAAGTCTTCCAAAGAT
GCACCAAAAGCACCAGAAGACAAAAAGGAGGTGGAGTCTGATGTTCCCAA
GAAGGTTCAACTAAAGGTTGCTGACCCAAAGAAATCCTCTAAcctcaaaa
tcatcaaattgaATGATAGTGACAAGTTCAAGAAAATTGATCATTTATTC
AAAGACCTTTTTAAGAAGGATGAACTTCCATCTACCAAGGACTCTGCCAG
ACCAACAAGATACGACAATCTAATCCCAAAAAAATCTGATGGCAAACTTT
CCGATCACCAACAAAAACTGTACGATGAATACCGCAGGATGATGGATGAA
AGATTTAACAGATTGGACCAACGTGACCAAGCAATGCGTGCCCAACGTTA
CGATAACCGTAGACCAGTGTATTCAGATCCCCGACGCCAACAACAGTACA
AACAAATCCGTCAAAGGCTTAGTCAGCAATATGACACGCCACACAACCGT
TTGCTTTTCAATAACCGTTTCAACGACTACCAAAGACGTCAAGATGACGT
ACGTCGTTACGATTTAGATCAACGTCGTCGAAGTTTAATCGAGGACTATC
GTAAAAGACTCACCAACGATTTTCAACAGCAAATGAATCACCATGACTAC
CCTCGTCAACAAGCAAGAAGATGGGGTGATGCTCCAGCACGTCACAACCC
TTTATACATACCACAACAAGGTCAAGAACGTAACTACCGTTTCGATACTG
TTCAGCGACGTCCAAAATACATTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016514XLOC_016514Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00029042-exon-sc0000723-1491911889:16625..16816TCONS_00029042-exon-sc0000723-1491911889:16625..16816Clytia hemisphaericaexon
TCONS_00029042-exon-sc0000723-1510915933:16625..16816TCONS_00029042-exon-sc0000723-1510915933:16625..16816Clytia hemisphaericaexon
TCONS_00029042-exon-sc0000723-1575043694:16625..16816TCONS_00029042-exon-sc0000723-1575043694:16625..16816Clytia hemisphaericaexon
TCONS_00029042-exon-sc0000723-1491911889:17409..17699TCONS_00029042-exon-sc0000723-1491911889:17409..17699Clytia hemisphaericaexon
TCONS_00029042-exon-sc0000723-1510915933:17409..17699TCONS_00029042-exon-sc0000723-1510915933:17409..17699Clytia hemisphaericaexon
TCONS_00029042-exon-sc0000723-1575043694:17409..17699TCONS_00029042-exon-sc0000723-1575043694:17409..17699Clytia hemisphaericaexon
TCONS_00029042-exon-sc0000723-1491911889:18190..18478TCONS_00029042-exon-sc0000723-1491911889:18190..18478Clytia hemisphaericaexon
TCONS_00029042-exon-sc0000723-1510915933:18190..18478TCONS_00029042-exon-sc0000723-1510915933:18190..18478Clytia hemisphaericaexon
TCONS_00029042-exon-sc0000723-1575043694:18190..18478TCONS_00029042-exon-sc0000723-1575043694:18190..18478Clytia hemisphaericaexon
TCONS_00029042-exon-sc0000723-1491911889:18638..19911TCONS_00029042-exon-sc0000723-1491911889:18638..19911Clytia hemisphaericaexon
TCONS_00029042-exon-sc0000723-1510915933:18638..19911TCONS_00029042-exon-sc0000723-1510915933:18638..19911Clytia hemisphaericaexon
TCONS_00029042-exon-sc0000723-1575043694:18638..19911TCONS_00029042-exon-sc0000723-1575043694:18638..19911Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00029042-proteinTCONS_00029042-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000723supercontigsc0000723:16625..19911 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.97845	3.72895	4.2422	3.12345	389.704	311.962	591.643	606.331	293.838	340.319	136.496	186.156	196.699	233.673	136.006	123.419	35.1144	48.0427	63.0682	76.5875	0.205401	0.21859	1.86008	2.35543	6.17914	4.16381	2.43632	0.367407	0.342972	0.65519
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00029042 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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