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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029095 ID=TCONS_00029095|Name=TCONS_00029095|organism=Clytia hemisphaerica|type=transcript|length=1084bp
TGTCATCATAACACAGTGTCACCTTATATCAGTACTCCCACTGGAGAGAA
TATCACGCTCATGAGTGACATAGGATTTCGACAACCGTTCTCCAGTGTTG
ACGAAATTATCTGTATTGGGAGTTCGCTAAGTTCTTGATAGTTTCATGGC
GCTTCCGCGCCAATCATCTTCCCTTTACCTTCCTTTGTTTGAGACAAAAT
TATTTCTTCAAAGCTACATCTaccattttcagaaaattggcTTTTGATAT
TTTACCGAACAAAAAAGTCTGTAAAATGCTTCTTTTCAATCAGGCGCAAG
GTTTATAAATTTACTGACAAGCGAAAAACGGAAAGTTGAGTCTCGTAGAA
ATTAGCATTCGGTAGAATACAGCGAGaataacaaattcaaaataaacaac
tTTGAGGAGCCTTTTCGAAATTTAGTTGGGCAGAGCCATGGCACCAACAG
AAATTTCAGTTGGCCTTAACAAGGGGCACAAAGTCACCAAGAATGCCCCA
AAGACCAAAGTTAGCAGAACTAAAGGGGTTCTTAGCAAACGTGTAAAGTT
TGTCCGTGATGTTGTCCAAGAAGTCTGTGGTCTTGCACCATATGAAAAAC
GTGCCATTGAATTGTTGAAGGTCAACAAGGATAAGCGTGCCTTGAAATTC
GTCAAGAAGAGGcTCGGAACACACACTCGTGGCAAAAGGAAGAGAGACGA
GCTCACccgaatttataaaaatatgcgAGCAAAGAAATAAACTTTCCTTT
TCTGCAAACAAAGTCTTATTTTCCTTTATTTTAAAGTTGTCTCAAAAGtc
attttaaaggttttctacggGAATAAAAGGAGCTCAAGGTCGGGGTAAAT
TATACTAACATTCCATCCAACATGCCATTTttatggggggggggtacatt
gagtttaaagcccgaagggctatagTAGAATCtccaacctttctcaggca
agaaaaaatgaagtcttaaaaaatgcgccgtatttttgacgacagattga
acccagcaattcctttgtttacaattgtagtccggcggcgaaaagggctt
ttttgcatcaacccttacaagtagtaaatatgag Run BLAST on NCBI protein sequence of TCONS_00029095-protein >TCONS_00029095-protein ID=TCONS_00029095-protein|Name=TCONS_00029095-protein|organism=Clytia hemisphaerica|type=polypeptide|length=100bp
MAPTEISVGLNKGHKVTKNAPKTKVSRTKGVLSKRVKFVRDVVQEVCGLA
PYEKRAIELLKVNKDKRALKFVKKRLGTHTRGKRKRDELTRIYKNMRAKK Run BLAST on NCBI transcript from alignment at sc0000724:22402..30498- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029095 ID=TCONS_00029095|Name=TCONS_00029095|organism=Clytia hemisphaerica|type=transcript|length=8097bp|location=Sequence derived from alignment at sc0000724:22402..30498- (Clytia hemisphaerica)
TGTCATCATAACACAGTGTCACCTTATATCAGTACTCCCACTGGAGAGAA
TATCACGCTCATGAGTGACATAGGATTTCGACAACCGTTCTCCAGTGTTG
ACGAAATTATCTGTATTGGGAGTTCGCTAAGTTCTTGATAGTTTCATGGC
GCTTCCGCGCCAATCATCTTCCCTTTACCTTCCTTTGTTTGAGACAAAAT
TATTTCTTCAAAGCTACATCTACCATTTTCAGAAAATTGGCTTTTGATAT
TTTACCGAACAAAAAAGTCTGTAAAATGCTTCTTTTCAATCAGGCGCAAG
GTTTATAAATTTACTGACAAGCGAAAAACGGAAAGTTGAGTCTCGTAGAA
ATTAGCATTCGGTAGAATACAGCGAGAATAACAAATTCAAAATAAACAAC
TTTGAGGAGCCTTTTCGAAATTTAGTTGGGCAGAGGTAATACAACTATAA
ATTATATCAGACTTTATCTGGCCAAGTGAAAGTTATGCATTTGTTTGACT
GTTGCAGAATGTCTCTGCAGTCCATTGTAAATACTTTATAGCAAATATTT
TGGAGTGAAAAGATGAATAGTTGAGTTATTTTTAACTTTCCAAAAGGGTT
TATCTCCAGTAGAAATCATGACTAGCAGAAACTAGATTTGCTATTCCCAG
CTCTCTGAGAACATCTTGAATGAGAAAAGCAACTGAGATAGATTCCACCA
TTGCTTCTGCTTTTGGAAATTAATCTAGAATGAGAAGCTATCAAACAGTA
GAGAGTACAAATAATGTTAGGCAATGTTAACTGAACCTTCTTAAACTAAT
TTTGGTAATTGAACCTGAAAGATCTTGATTTATTTGATTACAGTAGGTTT
CTTACCATCTGATGCATTCAATAGATTCTATGATTATTTAATAGTTGTGA
TAGGAATCACTTTCAAAATTCACAATCGGAACCAAGGATAGTTCAGTGAC
TTAGGGTGGTTGAATGGTTTCTGTTATAGATAGATGACCCATTAGACATT
AGATTACTCTATTACTGAAGTCAGAAACCCAGACGTCCTCGCTCGATAGG
ATCGATCATCGGAACGGCTCGATGACGGATCAATATGTGATTGATTGATG
GATTACTTAACGATCTGGATAGGAGATCGATTAAAGATCAATACTCAAGA
TTTTTTAAGCTCATGATTAGTTATCGACTATTTATCAATCTATCATCGAT
CTTTTATTGATCTTATCGACCCTATCGACTCATAATTGATTTACGATCGA
TAACAAATCGATTAACGATCGATGACGAATCGGTTAACGATCGATGACAA
ATCGATATACTGGATTGAAATACTAGAATAATCGATACTCAAGACTTTTT
AATGGCTGAATCTTCAATCGATCTCCTATCCGGATCGTTAAGTAATCCAT
TGATCACATATCGATCCGTCATCGAGCCGTTCCGATGATCGATCCTATCG
AGCGCGGACGTCTGGAGAAACAAACACATCAAACCTCAATGGAACACTCT
AAAAAATTTTTGACTTCAATCCATCAAAACAAAAACTAAAAATTTTAAAA
TGAGTACCAAATGTACAACAAGAAATGACTGTAAAATTGAAAATTGACGT
TAAAAAGCTAGAAAAAAAGTAGAAAAGGTAGCGCTTAACTTATGCGGGTC
TAGGAGGACCAATCTGTGTAAAAGTCATATACCGAAACCACAGCGTGGGA
AATTATTATATATATTATTATTATCATTATATTATATTGGGCTATTCCAG
GGGTATTATGTATGGATAACAAACTAACCCCTCGAAATTAGGAGTCGACA
CCTCTGGAAAGTGAAATTTTGTGGAAAAGGGCCTGGAAAGTGACTATTGA
TGCCACTGTAGGAGAAGAGAAACCCCTGGAAACCTTGGAAAATCTGAAAA
TGACGAAAAATCCCTTGGAAAATCAAGGTTTAGAACCCCCTGGAAAAGTT
CGTCAATACCCCTGTGCGGTTTAAAAATGGAATAGCCCATTATTATTATT
AGTTTATTTAGTTGCAGGTTAAAAAAAGGCAGTACAAGACTGATGTGGAC
CTACTAAAAAAGAATAAGTAGACTATAGATATATGAAGAAATCTGCAAAT
ACAAGTATATAAGAAGTATATTGGACTTACGAAAGAGCATTGGTTTTGAG
CTTACAAGGATTATATAAAAAAAAAAAAAAATAATAAAGTTAAAATCAAT
ATGTGAGTGGCCCCTAGTGATGTAACTTCTGCAAGTCTGCAGGGTCATAT
CCTTTTTCATGACATGAATTGAGTTTGCATATGAAAACTTTTGTGTTACA
TAGATTCTGCAGTCATAATGTCGTAATCTTCAAAATAACTGAACCCCATT
TGCAACTGTTGAACATCTAATTTGATTTTTATTTTCCTTGTAGCCATGGC
ACCAACAGAAATTTCAGTTGGCCTTAACAAGGGGCACAAAGTCACCAAGA
ATGCCCCAAAGACCAAAGTTAGCAGAACTAAAGGGGTAAGACATTTCAGT
TAATTTTTTATTTTGTTCAACAGGGGAATGAATGAACCCTGAAAAGGGGT
GGGTAGCATTTCTAATTCTTGATATTCATGATGTAATCTTTTGGTTGATT
GACACTCTGAATAAAAACATTTTTCTTCCATTATTGGTGGCAAAACAAAT
GCGTTCCCCAATGTTTTCCAAGCAAGGACCCCCGGAAAAAATAAGAAAAG
ATTAATACGGAAGTCCAAATCAAAGAAAAAACTTTCATTGAAATTCTTTA
AATATCTACAATAAATTTCCACAAGATATTAAGCTTTCTTTTTCGTAAAC
CCCCGGTTTCAAATAGGTTAGCTTACGTCAAACCTTTTGTTTAGGCGCAA
AGATTACATCATGAATATCATGAATAGTTTAAGATGGATGTTATGTGGCA
GATCACAATCTGTTGTCCCTGAATCAATGAAATATGCTGTTATTTGAGGC
TTCAACTATTTCGTATAATCAGAATGATGATTCAAAACTTTCGTTCTTCT
GAAATGGTTAGGAAGACAACAAATTGAGTCTGACTGATTTAATTCAACAT
TCTACTTCTAATTTTGACTACATGTTTTTTTATAAGGAAATCATTAAATA
AGGAATTTGAGACTGAAAATGGTCTGAAAAAATAAAGAATTTTTAAGGAG
CTACTCAGGCTAAGATTTATTTATTTATTTTGCAAGTTTTTAGACAAAAT
TTATGAGATTTAGAAACCAAGTTAAGGTTCCTTATTTATGAAAAACGTGC
AAAGTCTGTGTCGATATAATCTGTAGCAGGGAGAAGAAAAACTGTAATTT
TGAAATTTGAATTAAATAGCAGTTTTGTGAAAGTATTTAAGGCGCTGTGG
TACAGTGGTCATTACCTTGGCTGCTGCACAGGCGACTGAGGTTCGATTCC
CACTTGCAGCAGTTCACTTGGTAAGTGAACGAACCTTCGCCTGGGTCAGC
CCATGTCATGTGAGGGGAATAAGGTAGTCGTCCAAGATGCTCATTGAAAG
CATATCGTCGCATCAAAATAAGAAAGCCTTAAGTCCATTTTTTCAAAAAT
TGAGTTATGACCATACCGATGCTTTACACCCCATTTTTTATCGAATTTTT
GGCTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTAGCCCAACATGGTCAAAAATGGCAGCCATTTC
AAACCTTTAAACTTGATTTTCTCAAAACTACAAAAATGGACTTAAGGCTT
TCTTATTTTGATGCGACGATATATAGTTGCGAAAATAGGCCTCAAAGCCT
CCTGCAACTCAACCAAATAGAAATATTCAAAAAGTGAAAGATGGGGAAGA
AGCTCCAGGCTCTTAACCCTTCCTTTTGGTCTATAGACATTACCACCAGT
GACCCCTACTGGGAATTTGCCTATAAGATTCAAACATAATTAAAAAAAAT
TTAACAAAAGATGTTGATCAGTACAGAATCCAAATAAAAGAATGTTGAAA
ACACAGTTGATTAGCTTAGGTTTTGAAACTATTGTTTTATTTTTAAACCT
CAGTGTGCAAATGAAGAAATTGCCCTTTTTCTTTTTCCTAGGCATTAACA
AAGAGTCTATTTATAATGGAATAGCCCAATATTGTAGTTGCTTTAAGAGA
ATCTGTTGATGATGACTAGCAGAAGCTAGATTTGCTAATCCCAGCTCTCT
GAGAATATCTTGAATGAGTAAAGCAACTGAAATGGATTTCTCTATTTTTC
AACTGTTGAATTGTATGATATTCATAACTTGAGGTTTTAAAGAAGTCAGT
CTAGAATTTGACTTTAATCAGATTAAGAACGTCCTTTAAAGTGGAATAGC
CCAATATGGGGGGGGGTTGCAGGGGTTCGAAATACCGTTTTCCCGTCAAA
ATTTTTGCTGAATCCCGAAAATTGGAAAAATATTAACACCGTCACACCGG
CTTGTACAGGGCAAAAATGTACCTAAATACCGCCACCGTCTGATTTTAGA
GTGCCATTTTCCCGTCTCTTTTTTTGTCAAATCCCGTAATACCGTACTAA
AAAAGAAAAGGGCCAATCCCGTCACACCGTAAAAGTACAAACCCCCCCCC
CCCACAATATTGTATTTGCTTTTAGAGAATCTGTTGATGATGACTAGCAG
AAGCTAGATTTGCTAATCCCAGCTCTCTGAGAATATCTTGAATGAGTAAA
GCAACTGAGATGGATTTCTCTATTTTTCAACTGTTGAATTGTAATGATAT
TCATAACTTAAGATTTTAAAGAAGTCAGTCTAGAATTTGACTTCAATCAG
ATTAAGAACGTCCTTTAAAATGGAATAGTCCAATATTGTATTTGCTTTTA
GAGAATCTGTTAATGATGACTAGCAGAAGCTAGATTTGCTAATCCCAGCT
CTCTGAGAATATCTTGAATGAGAAAAGCAACTGAGATGGATTTCTCTATT
TATCAACTGTTGAATTGTATGATTTTCATAAATTGAGGTTTAAGGAGTTA
CTTTAATGGGATAAACTTTCGCGGGGATTAAATTTCGCGGTTGGGCCTAT
CCGCAAAATTCAAAAATTTCGCGGGGACTTAATTTCGCGGGTGGCACTAT
TGGGTGTCAATATTTTCACGATTTTGTGACTTTCNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACGAT
TTTGTGACTTTCACTGTCAAATCATACATGTTGGTTGTTGAAATACACAT
TATTTGCGCCTCTTTGATGCAAGTAACCATTCGAAAAGTATTTATTTGAT
ATACTTTGAGTTTTGTTTAGAAATATTTCGCGGATGAGGCCCTTCCAAAT
TTCCACTGGGACTTAATTTCGTGGATGACACCCAAATCCGCGAAATCAGC
GAAATTTAATCCCCGCGAAAGTTTATCCCATTAAAGTAATCTAGAATTTG
ACCTGAATCGGGTTAAATGTTCTGGATTTAATTTTGCAAAGAAGCTTTTG
CCTGAAAGCAGCTAAAATTAGCCATATTTTACAACAAATGGAGACTTTAG
ACTGGTTTCTCAGCAGAGAATGAGATTTGAAAAATTTTGTGGTAAATTTA
ATTTTGCAAGATAGGCATCTCACGTGGTTATTCAAGTTGAAAATTTTGCA
GAAAAAGGCAAGAACTTGCGAAATCATGAAATTTAATCTCACGAAAGTTA
ATCAGATTTTAAAGTAATAGTTATTGCACGGTAGACTCATTCACTGTTTT
TAAAATGGTAGTTACAGCACTGTTCTTCGTCGCAAAATTAGGTATTTCTG
CTTCATTTCTAAAGCTTTCTATATTCTGTCTCTTTGATATAGATATTCTA
CTCGTGAATATCTTTTCAACAAGCAGAAGCTGATCTATCTTTCTCTTTTG
AATTGTTCTCAAGAGCTCAAAACTGCTATTTGATTCGAGTTCTATCAAAA
GCTACCTCCCCTGCAGGTTACATGATTGAGTCATTGGAAATGATGAATCA
AAATACTTTCGTTCTTCTGAAAATGTAAGGAAGAAATTTTACGATTCTGA
TTCAAAGCATATGTTAAAAATGAAATTTGATATGGTTTTCTTTTCTCGAA
CTCAGAGAAATCTATGAGGATTGAATTTGAGGCATTCCCAGGTCTTAAAG
TACCAATATGGCTGGTTCATTAAAACAGTTTTTGGGACCATTATACTGTA
ACCATTCAAGACAAGGTACCTGGACTAGAAAATAAAAATCTAGGAAATCA
TTGCTTGCTAAGGTCTACAAGGACTATGAATTTGTCTATCGTAAGCAAAA
AGAGTCCATAAAGTTTTCTGCGCCAACTAGAAACTGTTGATGAACTTTTC
CAAACATTTTTGTTTCAGATAGGTACGCAAAACTTATCCCAAAATATTTA
TTTTTATTTTCGAAAGGTTCTTAGCAAACGTGTAAAGTTTGTCCGTGATG
TTGTCCAAGAAGTCTGTGGTCTTGCACCATATGAAAAACGTGCCATTGAA
TTGTTGAAGGTCAACAAGGATAAGCGTGCCTTGAAATTCGTCAAGAAGAG
GGTAAGTCAAAATTTCTACACATTTAGTTTAATCCTAGCTGATACTGGAT
ATTTGATAAACTTTTTTTGACTGATCTCAGGGCACATTCGCTGCAAAATA
CGATTATACTCGTAGTAGAGGGAGAACTTTTTAAGTTTGCATTGATTCAT
GATATTCATGACGTAATGTTATCTACGGAAAGACCCCGGTTTTTGCCAGT
AGTGGCACATTTTACATAATTCTGTCTAGTTTATATTTGCCACTACTGGC
TAAAACCGGGTTCTTTCCGTTGAAAACATCACGTCATTCATGAATATCAT
GAATAGACCTTTACAAATATTACGTCACGAACATCACTTGCCTCGTATTT
AAAAAATTACTATTGTGATTATGTCATTTGAGACATTAAAAATGACCTTT
TTTATAAATAGAAAATAATTTTAATAAAATCTGCTGGGTGTTAATCACCA
TGACAATAACTTCAAAACGTAGCTAGTGGTAATTTATGAAAAGGTCTATT
TTGACGGAATTCAGCTTTTTTTCAGTTCTATAAGATATATGTGGTTCAGA
GTCCAAAAACCTTTGCATCAAACGTTTGAAAAAGTCGTAAAATGAAATGG
ACGCTACTTTGTAGAAAGCAGGGCGTCTAAGAACTAACTGATCAATAAAG
AGAAATGTCGGTGTATTAATCAATGGGGAGTAACTTTGCGTGGTTGTGGC
TGATTTATTTATTTTATTTTTGTAGCTCGGAACACACACTCGTGGCAAAA
GGAAGAGAGACGAGCTCACCCGAATTTATAAAAATATGCGAGCAAAGAAA
TAAACTTTCCTTTTCTGCAAACAAAGTCTTATTTTCCTTTATTTTAAAGT
TGTCTCAAAAGTCATTTTAAAGGTTTTCTACGGGAATAAAAGGAGCTCAA
GGTCGGGGTAAATTATACTAACATTCCATCCAACATGCCATTTTTATGGG
GGGGGGGTACATTGAGTTTAAAGCCCGAAGGGCTATAGTAGAATCTCCAA
CCTTTCTCAGGCAAGAAAAAATGAAGTCTTAAAAAATGCGCCGTATTTTT
GACGACAGATTGAACCCAGCAATTCCTTTGTTTACAATTGTAGTCCGGCG
GCGAAAAGGGCTTTTTTGCATCAACCCTTACAAGTAGTAAATATGAG Coding sequence (CDS) from alignment at sc0000724:22402..30498- >TCONS_00029095 ID=TCONS_00029095|Name=TCONS_00029095|organism=Clytia hemisphaerica|type=CDS|length=909bp|location=Sequence derived from alignment at sc0000724:22402..30498- (Clytia hemisphaerica)
CTCGGAACACACACTCGTGGCAAAAGGAAGAGAGACGAGCTCACCCGAAT
TTATAAAAATATGCGAGCAAAGAAATAAGTTCTTAGCAAACGTGTAAAGT
TTGTCCGTGATGTTGTCCAAGAAGTCTGTGGTCTTGCACCATATGAAAAA
CGTGCCATTGAATTGTTGAAGGTCAACAAGGATAAGCGTGCCTTGAAATT
CGTCAAGAAGAGGATGGCACCAACAGAAATTTCAGTTGGCCTTAACAAGG
GGCACAAAGTCACCAAGAATGCCCCAAAGACCAAAGTTAGCAGAACTAAA
GGGCTCGGAACACACACTCGTGGCAAAAGGAAGAGAGACGAGCTCACCCG
AATTTATAAAAATATGCGAGCAAAGAAATAAGTTCTTAGCAAACGTGTAA
AGTTTGTCCGTGATGTTGTCCAAGAAGTCTGTGGTCTTGCACCATATGAA
AAACGTGCCATTGAATTGTTGAAGGTCAACAAGGATAAGCGTGCCTTGAA
ATTCGTCAAGAAGAGGATGGCACCAACAGAAATTTCAGTTGGCCTTAACA
AGGGGCACAAAGTCACCAAGAATGCCCCAAAGACCAAAGTTAGCAGAACT
AAAGGGCTCGGAACACACACTCGTGGCAAAAGGAAGAGAGACGAGCTCAC
CCGAATTTATAAAAATATGCGAGCAAAGAAATAAGTTCTTAGCAAACGTG
TAAAGTTTGTCCGTGATGTTGTCCAAGAAGTCTGTGGTCTTGCACCATAT
GAAAAACGTGCCATTGAATTGTTGAAGGTCAACAAGGATAAGCGTGCCTT
GAAATTCGTCAAGAAGAGGATGGCACCAACAGAAATTTCAGTTGGCCTTA
ACAAGGGGCACAAAGTCACCAAGAATGCCCCAAAGACCAAAGTTAGCAGA
ACTAAAGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00029095-exon-sc0000724-1575043694:30064..30498 | TCONS_00029095-exon-sc0000724-1575043694:30064..30498 | Clytia hemisphaerica | exon |
| TCONS_00029095-exon-sc0000724-1575043694:28014..28105 | TCONS_00029095-exon-sc0000724-1575043694:28014..28105 | Clytia hemisphaerica | exon |
| TCONS_00029095-exon-sc0000724-1575043694:23548..23682 | TCONS_00029095-exon-sc0000724-1575043694:23548..23682 | Clytia hemisphaerica | exon |
| TCONS_00029095-exon-sc0000724-1575043694:22402..22823 | TCONS_00029095-exon-sc0000724-1575043694:22402..22823 | Clytia hemisphaerica | exon |
| TCONS_00029095-exon-sc0000724-1510915933:30064..30498 | TCONS_00029095-exon-sc0000724-1510915933:30064..30498 | Clytia hemisphaerica | exon |
| TCONS_00029095-exon-sc0000724-1510915933:28014..28105 | TCONS_00029095-exon-sc0000724-1510915933:28014..28105 | Clytia hemisphaerica | exon |
| TCONS_00029095-exon-sc0000724-1510915933:23548..23682 | TCONS_00029095-exon-sc0000724-1510915933:23548..23682 | Clytia hemisphaerica | exon |
| TCONS_00029095-exon-sc0000724-1510915933:22402..22823 | TCONS_00029095-exon-sc0000724-1510915933:22402..22823 | Clytia hemisphaerica | exon |
| TCONS_00029095-exon-sc0000724-1491911889:30064..30498 | TCONS_00029095-exon-sc0000724-1491911889:30064..30498 | Clytia hemisphaerica | exon |
| TCONS_00029095-exon-sc0000724-1491911889:28014..28105 | TCONS_00029095-exon-sc0000724-1491911889:28014..28105 | Clytia hemisphaerica | exon |
| TCONS_00029095-exon-sc0000724-1491911889:23548..23682 | TCONS_00029095-exon-sc0000724-1491911889:23548..23682 | Clytia hemisphaerica | exon |
| TCONS_00029095-exon-sc0000724-1491911889:22402..22823 | TCONS_00029095-exon-sc0000724-1491911889:22402..22823 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000724 | supercontig | sc0000724:22402..30498 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR000509 | Ribosomal_L36e |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005622 | intracellular |
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006412 |
translation |
| cellular_component |
GO:0005622 |
intracellular |
| cellular_component |
GO:0005840 |
ribosome |
| molecular_function |
GO:0003735 |
structural constituent of ribosome |
Blast
BLAST of TCONS_00029095 vs. Swiss-Prot (Human)
Match: RL36 (60S ribosomal protein L36 OS=Homo sapiens GN=RPL36 PE=1 SV=3) HSP 1 Score: 125.176 bits (313), Expect = 1.272e-34 Identity = 59/87 (67.82%), Postives = 75/87 (86.21%), Query Frame = 3
Query: 453 ISVGLNKGHKVTKNAPKTKVSRTKGVLSKRVKFVRDVVQEVCGLAPYEKRAIELLKVNKDKRALKFVKKRLGTHTRGKRKRDELTRI 713
++VGLNKGHKVTKN K + SR +G L+K KFVRD+++EVCG APYE+RA+ELLKV+KDKRALKF+KKR+GTH R KRKR+EL+ +
Sbjct: 7 MAVGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNV 93
The following BLAST results are available for this feature:
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