TCONS_00029196 (transcript) - C. hemisphaerica

Overview
NameTCONS_00029196
Unique NameTCONS_00029196
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length120

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00029196 ID=TCONS_00029196|Name=TCONS_00029196|organism=Clytia hemisphaerica|type=transcript|length=120bp
GAGGAAGGAGTTTAAGTTCAAACGCTGGAAGAAAAAGATGAGCCAGAACC
AGAACCAGAGGTCAAAACTGAAGAAGCCAACAAAGATGAAACTGACGATA
AACcaatcaaaaagaagaaa
Run BLAST on NCBI

transcript from alignment at sc0000728:117842..118335-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00029196 ID=TCONS_00029196|Name=TCONS_00029196|organism=Clytia hemisphaerica|type=transcript|length=494bp|location=Sequence derived from alignment at sc0000728:117842..118335- (Clytia hemisphaerica)
GAGGAAGGAGTTTAAGTTCAAACGCTGGAAGAAAAAGATGAGCCAGGTAC
CTGTTGTGTTTTAATGTCAGTTGGACACTGCTTGAATAACCAATAGAATC
GATTTTAGCTATCGCGTTCAATTTCTTTGCTTTCATGAGCTATCCTACCC
TTTTCGTGACAAGTTTCCGTTGTCGATTTATTTGTACTTTGGAATAGAAA
TGATCAATCGTACTAAAAACCACGACTCTGGAACCTTGAACTCAAATCGG
TGATGCTTGGCGAGAGAAATGATTAGGGATAAGCCTGCTGGAATTTGTAA
CAATACTAGAAAAATAAGTTCCCTCTGATCGTGATCAATCGTGCTCTTCA
GATAAAGTTTCCTCCCATCAGATATATCATTTGACATTAAACTTGTTGAT
TTCTTTTTTTTCTATCTTAGAACCAGAACCAGAGGTCAAAACTGAAGAAG
CCAACAAAGATGAAACTGACGATAAACCAATCAAAAAGAAGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016615XLOC_016615Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00029196-exon-sc0000728-1575043694:118290..118335TCONS_00029196-exon-sc0000728-1575043694:118290..118335Clytia hemisphaericaexon
TCONS_00029196-exon-sc0000728-1575043694:117842..117915TCONS_00029196-exon-sc0000728-1575043694:117842..117915Clytia hemisphaericaexon
TCONS_00029196-exon-sc0000728-1510915933:118290..118335TCONS_00029196-exon-sc0000728-1510915933:118290..118335Clytia hemisphaericaexon
TCONS_00029196-exon-sc0000728-1510915933:117842..117915TCONS_00029196-exon-sc0000728-1510915933:117842..117915Clytia hemisphaericaexon
TCONS_00029196-exon-sc0000728-1491911889:118290..118335TCONS_00029196-exon-sc0000728-1491911889:118290..118335Clytia hemisphaericaexon
TCONS_00029196-exon-sc0000728-1491911889:117842..117915TCONS_00029196-exon-sc0000728-1491911889:117842..117915Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000728supercontigsc0000728:117842..118335 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00029196 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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