TCONS_00029214 (transcript) - C. hemisphaerica

Overview
NameTCONS_00029214
Unique NameTCONS_00029214
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3411

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00029214 ID=TCONS_00029214|Name=TCONS_00029214|organism=Clytia hemisphaerica|type=transcript|length=3411bp
TAAGGTGGAACAATGACAAAGATGTTTGTAAGGAGGAGGATATTTGGATG
TGAGTTGGTGGTGAAGTGAATCATTCTCTGTTTGGATGCACGTCTGAGAG
GAGGTGTCACTCGCAACAGAGAGAAGTGAGAAGATGAAGTTGGAATATAT
TTTGGGCGTGGCACTGTTGTTGGAGATTGTTGCTGCACAAAGTTCTCTCA
ACACCATCAAAGGAGGAAGCATCAGTTACCGATATGATCCTCAAAGTGAT
GAACATATCTTGGTGGACTTCTACTTGAGTGTTGCTAAAGATTCTGATTA
TGGTAAAGCTTGTCAACGTGAAACCAAAGAAGGTGAAGAGCACACTCAAA
ACACTGGAATCTCTCTTCGCTTTTGGAGAGGAAGCAGTTATCCAAGATCA
ACTGACAGCGGTGCTTTATTTGAATATATAAAGTATTATTGCGAATCACC
AGAACCTGTTACACGGAATTATCCAAGAACGCAACGCCAAATCATCTACG
GTACTCATCGAGTTCCAAttagcatgtattacttttttgtcgGTTTCAAC
AATATGGACACGGATAACGGAGTGTTAATTACACAATTTTCAAATGCTAC
CCGACCGGACACAAGGGAACGAAACTTGCCAGCACGTGCAGCAGTTTTTG
GAATGCATACCGTTTATCACGACGAAGATTCTTTGAAGTTCCTTGTAACG
GACACGAACCGAGACCACATCCGTTGTGAAGTGGAAGGAAGAATGCTTGA
AGGCTGTGCGTTGAGTCTGCATCATTTGCCAAAGACAAAGAAATTCACCA
AGACCTTCAACGTGGTAGTCACCAAATTCGCACATTCTTCAATGAGTTTT
TCTTCGCATGTTTCAAGAATGTCTTTCTTGGTTGAAGTTGAACGTTTGGT
TGCACCTCTCTCCGCCTCTTCTTCAGCCAGGGCGGAAATCATGGCGGGCG
TTCCTTCTTGTCTCTCAATCCANTCTCCGCCTCCTCTTCAGCCAGGGCGG
AAATCATGGCGGGCGTTCCTTCTTGTCTCTCAATCCACGGTAACGGTGCT
CACGTCGAAGAGCATGATGATATCATCGGTCGAAGCGTCAGAGAGATTGC
ATACGAGAGAGTTGGAGGACGTCGTATCATAACCAGAGCTGATCCACAAC
GAAGTGGAATCACTTACACTTACAATGGTACTATCGATAAACATCGTCCT
GAAGGGATATATCCAACCTGTTACCGTATCGTCACTGCAGATCCCGAAAA
CAACTACATATATTCCAAACAAGTTTGCACACAAGTCTCAACTCTTAAAG
ATGGTTTTGCTTTGAAGACAGAATACAACTACCCAAAACACGGGGGTAAA
GCAATGGTTGATGACGTCAAAACTTTGAATGTAGTCGTGCATGGAGCTAT
GAAGGAACCAACAACGTTCAGTGTCGCCATCTTGGAATATGAAACAGACA
GATCAGTTTATTCTTTCGATTACAACGAACGTAACATAAAAGAACATTAC
AAAACGGAAAACGATCCTATAAAATTGTTCATCACAAATATCACCATCAC
TCTCCCCTACATGACGTCATTGGTGGCTAATCGAAAGTATTACGTCATCT
TTAACAAGTATCCCTACGCACTACCAGGGTGTAAAGATCACCAACGAGAT
TCACCAATGAACAAAGATGAATGGACATTCACTACTGAAAcgGTGTCGAA
CAACCCACCCATGCCCATCGATGGCGGAGAGATAAAGCATGAAACAGAGT
TGATGTGTAAACACGATTCTTTTAGCTTCACTTTCAAACAACTTCACAAT
TCCACAATGCCAATCAAAAAAGTGACTTTGTTGAAGGATGATTGCGAGAT
GAGATACGATCGAATGAGCAACATATACGACGCCTTGAACATCATGTTCA
CGAAGTGCGGCACACAAATGAGTGAAGACGAACATCACATTGTCTTCAGC
AATATCGCACGTGTCTATTACACTAATAGAACGACCTCCAATTCACTCAT
CACCCGAACCAAAACCATGAATATCAAACTTGAGTGTCGTTTACCAAAGA
CACAAATCAACACGTTAAGAGGAAAACCAACCAGGAATGCAACGGACGGA
GGAGACGGTTCTGGACCTGAGGGAATCGTTGTTGGTCCACAGTTTATCGA
AATTCACGACACTGCACGATCAAACGCTTCATTCCGCATCGATTTCCAAG
TTTACAAATCACTCCAATACGGTCACTCATACGGCAGAGAAGAGTTTCCA
ATCTATTTGGCTGTCAGTAACAGAATCTACTTCGAAGTTAGCATcgataa
aaaagatttaagcaTCTTACCAAGAACCTGTTATGCTACCAAAACACAGA
GTTACCAAGATGAACAGAGATATCATTTGATCCAAGATAGTTGTCCTAAA
GACCAGACGTACGTCATGCACAATGACAACATCGCTAAAAACAAATTCCG
CTTCAGCGTCCAAGCATTCAACTTCAAAGATGGCGGAGATAGTATTTTCG
TACACTGTCATACGTATGTATGCAAAAATCAAACGGATGAACAATGTCAA
TTCGGCTGCCATAACAATGGAAAACGGTCTCGCAGAAGCATCGAGTTGAA
AGAAGAGGTTGAAGGCTACATGACCTCTACActagaaatcaaaatcaagg
GCGACAAGATTGCAGTTATCCACAACAGATCATCCAGTGATGATGAGACA
ACAGACGATCAAAGCAAGACTATGTTGTTGTACCTTCAAATCCCTGTGGC
CATCGCTGTCTTCGGTCTCCTTTTCTTCGCTTACAAATGTCTCCAAAAGA
GAAATGCTTCTTCAAATGGTGGTGTCTTCTTTGAAGAAGAAATGaagttg
aagaaaaatgaaatgctGTAAATGCTTTGTTGTTGTAAGTTAAGGAAGTC
AAAAATGCTGGAGAAACTTTCGCTGAATTTGTAGAACAAACATCCCTCTA
CCACTAATGCTGATAAAGAAAAGGCATGAGAGTAGCTTAATGTTCATTAT
AATCGAGCAAGCTCTGGTATNAGCTGATAAAGAAAATACATTATAGCAGC
TTAATGTTCATTATAATCGAGCAAGCTCTGGTATCAGCCTCAAAATTGTT
TTAGTAATTGCAGCGttgtgtttttttattaaacactttagatttttgtt
aaataaattttgtaaccATATGACCTAGAAGATGTATTTATTGGGTGTAT
TTAAGTCAAGGAATAGTTTTTCAATGAACATATAATCATAGattgtagat
tttttttcaaatttcgaaatatattttcaatataattttgttactCGCTA
ACTAAATATAATTCTTAGAAATTTTCTATCCAGGTAGGAAACGTCCCCTT
ATCTCCCTAGCGATTGAAGGTCAGAGGTTGTTGCACCAAATTAAAGAGTA
AGTGGTTGGTG
Run BLAST on NCBI

transcript from alignment at sc0000730:17586..29837+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00029214 ID=TCONS_00029214|Name=TCONS_00029214|organism=Clytia hemisphaerica|type=transcript|length=12252bp|location=Sequence derived from alignment at sc0000730:17586..29837+ (Clytia hemisphaerica)
TAAGGTGGAACAATGACAAAGATGTTTGTAAGGAGGAGGATATTTGGATG
TGAGTTGGTGGTGAAGTGAATCATTCTCTGTTTGGATGCACGTCTGAGAG
GAGGTGTCACTCGCAACAGGTTTGTCGGAATTTCTTACCACaccaagctg
gcacacaacgttgtttcaacgttcatctaacgttatatggacgttgtgaa
cgttagataaacgttgaaagaacgttgtgtgccaccTGGGCAATCTAACT
TACTTTCACATGTGGAGATTTCACATGGAGGAGTTGTATTGCTACACATT
CAAAAAGCGTAGGAGAAGAGTTTCGCACTGTCTTTTCTTCCTGTTCATCC
AAAAAGGAATTCAATTTAAGTAAAGTTTAGCAAGTCGTTAGGTATGATTG
CTATTAGTGAATAATTTAGAATCGGGACAATATGTTCCAGTAAGATTACA
CATAAAATGCTTTGATTTACCTCTATCAAGACAATtattgaagattttga
ttttgttttcaaacagAGAGAAGTGAGAAGATGAAGTTGGAATATATTTT
GGGCGTGGCACTGTTGTTGGAGATTGTTGCTGCACAAAGTTCTCTCAACA
CCATCAAAGGAGGAAGCATCAGTTACCGATATGATCCTCAAAGTGATGAA
CATGTAAGAAAGTTTCATTTCACatatttttctccattttactagataca
cgttttttatgagaacaaactatataaggacatcaccaatttcttagaaa
atcgcacgaaaatattaaaaaaatggtgaaaataagaatattttaagaag
atTCTTAGGCGACgacttcaaaaatttcttccgaAAAGTCTCTTCAAATC
ACTTTGCATTCTAAGACTAAAAGGTGTAGAAActtttgatatttccatat
tccAAAAGTGAAAGTAAGATTTCATACAGCTCATGAAAAAGGAAACCAGT
GTATTTTCTTGATGATTAAAAAAGCTTTCTTAGGAATCTGTTCCACTGCA
AgacttttagattttttatgTAATGATCGTAGATGTTTTGCAAAAGTAAG
TGTCTTAACGCATTAGATTTCGTAGTCTCCTACAATTTGCttcacagcat
ttttaaacagaATCCTCCCCCCTTAACGCCCCGTGAGCACAGctaatttt
gagaaattcctcCTTTTTATACCATCAAAGagaattcttgatattcatgg
cgtaatgttttctacggaaataccccagTTTTAGCCAGTGGTGACAAATT
TAAACTagagacaaaagttgtataaaactatgccactactggcaaaaaac
GGGGTCTttctgtagaaaacattacgtcatgaatatcaagaatttcatTA
TCACACTAGCGGTCCCAGACACTAGTTCATTACCTACATCGAAGAATGCA
TGTAAAActatatattttaaaaagatttaacTCAAAACGATGACCTTGCA
GTGCTAGTTTCCACCACAAACGATTTGCTTCCAAAAAGCTTCAAATTAGA
GAGGGATCCcttagccatcgtggctagccatTGTGTGAAGACATTTGATT
GTGACTTTgaaacactttgaaaatctttgaaaatcgtTGGAAATGTTTCt
cgtaaaaattgaaaaatgaaatagtaGAGGCGCTTCTGAAGCTCTTTAAA
ATACTACAAATGTAAAGAAATTACGAATTACTCAAAATTCAATGTGGAGG
AATGCTGAAGGTTTCCGCAGCCAATTGTTAAAATCTATAAAAGTCATTGA
CACTAATCAGGGAGGCAAAAATTACCAATATCGTTACCTGTGTTTTTGCT
AAAAGTGTTAATCTAAAACAAAACCCCCTGAAAAATATTACGGCATCGCT
AGCGAAAATCAAAAGGCTGTACAAGAAGGCTTCATACAGGTATTATAAAG
ATTTGATGACGATGTGTTCTGTTTTCCAACTTCTAACAGATCTTGGTGGA
CTTCTACTTGAGTGTTGCTAAAGATTCTGATTATGGTAAAGCTTGTCAAC
GTGAAACCAAAGAAGGTGAAGAGCACACTCAAAACACTGGAATCTCTCTT
CGCTTTTGGAGAGGAAGCAGTTATCCAAGATCAACTGACAGCGGTGCTTT
ATTTGAATATATAAAGTATTATTGCGAATCACCAGAACCTGTTACACGGA
ATTATCCAAGAACGCAACGCCAAATCATCTACGGTACTCATCGAGTTCCA
AttagcatgtattacttttttgtcgGGTaggtttactttttacttatCAA
TCTATCTATCCATTCGCCATTTGCCTTTCTCAGGACTCTTGGATATCTAT
CAATCTAGTACAAATGTGATTGGCAGAGATCACCGAAGACACTAGCTGTA
GTGACTTTGATNCATATATAAAGTATTATTGTGAATCGCCAGAACCTGTT
ACACGGAATTATCCAAGAACGCAACGCCAAATCATCTACGGTACTCATCG
AGTTCCAAttagcatgtattacttttttgtcgGGTaggtttactttttac
ttatCAATCTATCTATCCATTCGCCATTTGCCTTTCTCAGGACTCTTGGA
TATCTATCAATCTAGTACAAATGTGATTGGCAGAGATCACCGAAGACACT
AGCTGTAGTGACTTTGATAAGATATAAAGTcttttggagcttgattttta
aCTAATATTTTTAATAATGTTTAATTCCAGTTTCAACAATATGGACACGG
ATAACGGAGTGTTAATTACACAATTTTCAAATGCTACCCGACCGGACACA
AGGGAACGAAACTTGCCAGCACGTGCAGCAGTTTTTGGAATGCATACCGT
TTATCACGACGAAGATTCTTTGAAGTTCCTTGGTAAGGATTACCCTCATC
GAGTTTCCTTTTTAAGAGTTACCCTCATTGAGTTTCATCGTTAAGActac
agatttataaagcccgaagggctagatggcgtgctataagcttttccaag
ccttccaagcaaaaaaaataaatattggaaaaaatattgttgctatagTT
TTCGAATacctgcgaagcttctgatCGGTCAGACCGTCAGacattctatt
gtaatgtctcacggtacacttttcagcaaaagcacgactTTTAGCCCGTc
tggctttataaatctacaATTAAGaccttttatttttaaagattcgAGTG
CTAAATTAGAAGATTAAATCTTCGCTTTTGACCACGCTATTCAAGGGTGG
CGGGCGTTTGTTGGGCGTCTATGTAATCGAATACTTTATTTCTCTTTCAT
TTACAGTAACGGACACGAACCGAGACCACATCCGTTGTGAAGTGGAAGGA
AGAATGCTTGTAAGTTCCTCATACCATTaaaaaatgggtgaaaattcATT
CTTTGAGGATATCTAATCAAATGTTTGTTGTTTCTGTAAAAAAGCTACAT
TTTCTTACTGGCTAAATGACTTTCCTTTTTAATTAGTTTGGCCTTGCCTT
AGTAGCAAATATTTTATTCTTCAATGATATTTTCTGCTCATCTTTCACTT
GAGGAACttcaaatcaaaagattttgacTAGTTAGGTTTATAATATTCAC
CCTGATTCTCAGGAAGGCTGTGCGTTGAGTCTGCATCATTTGCCAAAGAC
AAAGAAATTCACCAAGACCTTCAACGTGGTAGTCACCAAATTCGCACATT
CTTCAATGAGTTTTTCTTCGCATGTTTCAAGAATGTCTTTCTTGGTTGAA
GTTGAACGTTTGGTTGCACCTCTCTCCGCCTCTTCTTCAGCCAGGGCGGA
AATCATGGCGGGCGTTCCTTCTTGTCTCTCAATCCANTCTCCGCCTCCTC
TTCAGCCAGGGCGGAAATCATGGCGGGCGTTCCTTCTTGTCTCTCAATCC
ACGGTAACGGTGCTCACGTCGAAGAGCATGATGATATCATCGGTCGAAGC
GTCAGgtattcagtttttttgttttaaatcaaCTACAaatatacagttga
cactctctaatttgaccttcccttattcgataagctcccttattcaatga
aactccaattccccttgaagatcgaattagagagcgttaaCTGTACTTTA
TTCCATCAAAGACTCAATGTCTGGAAAAGAAGAAACAAACCTTTTCTTTT
AGCCAGTTATGGTGGTATTTTAAGAGCGTAAATCATTTACAACCATGTCT
AACCCAAAAAACGTTAATTTGTTGATTCAGAGAGATTGCATACGAGAGAG
TTGGAGGACGTCGTATCATAACCAGAGCTGATCCACAACGAAGTGGAATC
ACTTACACTTACAATGGTACTATCGATAAACATCGTCCTGAAGGGATATA
TCCAACCTGTTACCGTATCGTCACTGCGTAAGGCTCTTTTTACTCTTGTG
ATACTTTTCTGTCTCGCTTAAAAGGAAGAAAGAAATCCCAGTTAGGGCAA
TAAGCTAACGAAGAAAATTCCAGGTTTTCTAATTCAACGTTTCCCCTCGT
TTATATGACGTATTTCCTCCGAAAAACGCCGCCAGGATCTTAGGTAAAAT
GTTCGTTAGAGGTCTGCGTTCATAAAGGATTGCTATATTTAAATGGTGGC
CGTTTGGGAGTTTTAAACGACACCACAAATATTGCAAACAAACATTCGAA
Taggcttttccaaaaaagattttacccccactgttgaggctattgatttt
tcgaagtgtttagccccctggatatcctctcttataaagatgcttacccc
tggatatcgtattttttacttgaaaagacaactttaccccctggatatcc
gcccccttgtagatatttaaccccctggatatccacttttgaacaaaaat
tgttaaCCCCCTTGGATATCTGATATCTTCaacacggactatttctggaa
aagcccaatatagATAAGACCTGATCAATTCGCAATGATTATGCTTGTAT
ACACAAACTGAGAAGAGTCCCTTTCTTCTTTATAGAGATCCCGAAAACAA
CTACATATATTCCAAACAAGTTTGCACACAAGTCTCAACTCTTAAAGGTA
GGTTTCCATTGACAGTTTGAAAGGTAAGGTTTAGTTTATAGTAGCAACGG
CATACTTTAAGACGACTTTTTTTCCACTGGGACGTCTACTTATGTTGCAC
ttatattacacgtttttttttgaaGTAATTTTCATATAAGCGTTCAAGGC
CTATTTTTCTCGTCCAAAGGTAACAAAAATTTCGAATTGTTGCCCATTGT
AGTGAATTAGTTTTGAAATGTTTCCTTATCATATTTTCGGCAGATGGTTT
TGCTTTGAAGACAGAATACAACTACCCAAAACACGGGGGTAAAGCAATGG
TTGATGACGTCAAAACTTTGAATGTAGTCGTGCATGGAGCTGTAAGTTGT
TGGTTCATTCAACGAATAACTAATTTAGAAAATTGCAACTCTTTATTAAA
CATGACAACCTGGTTAAATTGATCGAAATTAAAAAGAACTTAAACAAATT
TATTCAAGAAGAAAGGCAGATATTTTTCACGAGGAATCTCCTCACTAGAT
CCCATACTATCAGCTGCAGAAAACCTGTCGTTATTccgaatacacctttt
caaccgtagccgcCAGTTGCCGTGCGGGTATTTTTTGTTTcgccacccta
aactcgatccaatcctttttttgacacatttttctattgtctatagatgc
aaaaaaggactgggatggttttagggtggtaaaacggagcAAATAGTGTC
GAAaaggttgaaaaggtgtattatctTCCCATACTAATGAACTTCCACAT
TGGGAAATAAATTCATTGGCTAACAACACCACGGTTTTCAAATCATCGAG
CTCAAATCCGGAAGGGCTAAAAGTGAAATCTCTTTCGTGGAAAATAAAGC
CACATAAAATTCATTGTCATAGTCTGTGTCAGATTCGTAGCAACCGTAGT
GGTAGAAGGTTGTGGgttcataccaaagatttccaaatgGTACTtggtgc
ctctctgcttgatgctcatgCAGCAATTAAGACAAgagtcaagggtaagt
ggagcaatccagggagaaagagtggcgccctcccctaccttcaaGTAGAT
AACTATCAAAAGAGGAGCCTCCGGgccgcctccgactgcggtcgcagact
atGTCACATTTAAAATATATGTAaggtgaaaacaaacaaaaggcTAGATC
CAATCCGTCATTCTGAATACGGTGCAAATTTTAAGGTGGTAATATATCTT
GCGATTATTGTCTTTCTTTCAGATGAAGGAACCAACAACGTTCAGTGTCG
CCATCTTGGAATATGAAACAGACAGATCAGTTTATTCTTTCGATTACAAC
GAACGTAACATAAAAGAACATTACAAAACGGAAAACGATCCTATAAAATT
GTTCATCACAAATATCACCATCACTCTCCCCTACATGACGTCATTGGTGG
CTAATCGAAAGTATTACGTCATCTTTAACAAGTATCCCTACGCACTACCA
GGGTGTAAAGATCACCAACGAGATTCACCAATGAACAAAGATGAATGGAC
ATTCACTACTGAAAGTAAGaccttttcacttttctttctGATATCTTACt
aattcataatatgcaccattacaatgtcttccacagacacaacagctgat
tggttgaaagtgacgtattgactgattttacgtcacttacaaccaatcag
ctattgggtccatgatataatgtcagaagacattgcatccATATCATGAA
TAACTAGAAGCAGATTTGGTGCCAGATGTGGAGCTTTTTTTTTCCTACAT
ACACCACCAGATCCGAAGGTGAGGAAAGTGTTAATATTTTGAAGGTGTGA
ATAATGGAATTCAGCCAGGACACCATTAGAATTTTTGAGGATGCCTACCT
ATGAAgcaaaaaagaagtaaatttcaaattttcaaatgaacaTATAAAGA
ACATTGATAAACCAatcaattcttgatatgcgtaagtcaagatgacgtca
tattttcaaCGGAAACGCCCAAaaaaaagccggattttgacctccgtgtt
tctatttttagtaacagagtcACATTTTTTCCActtgaaaaatgacttac
gcatatcaagaattcaaAACACGTGAGATGTTTNGCAGAGAGGGGTCACA
TCCCGGatttttttgggtgtttccgcttgaaaaatgacttacgcatatca
agaattcaaAACACgtgagatgtttttttttctttcagcgGTGTCGAACA
ACCCACCCATGCCCATCGATGGCGGAGAGATAAAGCATGAAACAGAGTTG
ATGTGTAAACACGATTCTTTTAGCTTCACTTTCAAACAACTTCACAATTC
CACGTATGTTGTCTcgttcagttttttttttcaatttgatacaacacccc
tgtgtcacagacccgctgggaccccagcaccattggaaaatttggcaaaa
aattcgTCACCATTGGGAGAACACCCTGAAATTCCACCCCCACTGagaaa
tttactttgatttcatccctatccgaaattcaatgtttaaaaatgacACT
CCAAAACTATTCCCACTGGAATTTGTGaccttagaacaatagaatttcta
tccccattggaatttcaataggaatttttatcttcAGTGAGGTAAAATTT
CCACCGGGGCTaggagacaggggtgtgctATAATTTTGAACTGTAACTTT
TGATGTGTTTATACCGTTTTTTGACGTTTACACAAGGCTCACAAAGTTCA
TGTAACGCTCGATGAACGCTGAAACACAGCTTGTTTGTGGCAGCTGGATT
CTCTCTCTTATGAagaagacacccccttctcacagacgcTGTTGgatccc
ttcccactggaaaaatgcccaaaaaatcgtccccagtggaaaattatact
gcGAATATTGGCTctatttaaaatattcaaataaactaatcctcactgca
aaatattatatgCTATGTTTTGTATCCCCACTGAACTTggtgacttgaaa
acaatggaatctAAATATCCACATCGAGTTTCGGTCCGttattttacccc
cactggctgagaAAATCCTACCGTTTCTGTAAGAATGGGGTGTAAGAAGT
GCCACTAAGAGTGGTTTCGTTACCCCAGTGCAACTTGTGAGCGCTGttag
aatcataaaaaaaaacaaacgagGGGTCTGTGTATGAGTTTTGTTACTGG
TATTCTGGGTGGCAAGTTACTGGGAGTAGAGAGTTGTGTGACGCTCCATC
TCAGCATTTGATGTAAAATGTCTAGCGCAAAtggaaaaggggatagactc
cctcactctcTCACTCTatgctccgccgacagccaccagatgaatatagt
TATTTACTTTACTTTTTATCAATTTACAGAATGCCAATCAAAAAAGTGAC
TTTGTTGAAGGATGATTGCGAGATGAGATACGATCGAATGAGCAACATAT
ACGACGCCTTGAACATCATGTTCACGAAGTGCGGCACACAAATGAGTGAA
GACGAACATCACATTGTCTTCAGCAATATCGCACGTGTCTATTACACTAA
TAGAACGACCTCCAATTCACTCATCACCCGAACCAAAACCATGAATATCA
AGTAAGCTTTTTTATGACATCGCCTGTGCGCCTGAGATTAGATTGTtatt
gttttctgcacaccacgcggATCTCTAAAGAGATGTATGAAAACCACTGA
CCTTTGTATATCCCTTGACCAAGTCACTCAATGCTGGCCaaacaaaatat
tatgatcagagtttttttgaaattggtacccacGGTGAGAGCGCTAGATT
AGTTTCGTTTGTACACTAATGATGTAGCACCGTTTGTCTTtaaggcaaag
tttcaaaccctacaatagcttctttgcgggtaccaactTTTAAAagaact
tcgatcaaagatggcggatatagcttggtccagggatatataaaacTCAG
TAATGAAAATAAACCATTTCTCAGGAGTAGGAATGAACACGGAGTTGCGT
AACGACAATTGAAATAGAGCGATGTATATTGGAAACAAGATAAAGTTTTA
ACATCCCGCTTGAAACAAGATTTTTGTAATAGAAGTCACTATTATACTCA
GATAGTtcattttcaagcgcctttataggtttaccgtgcacgtaagaaag
tTGTTGCAATCTGTTATCAGAATACCATTTTCTAGATCCTATCGGACTTC
TTTTACTTCAGTCGGCAGGGATTTTAAGCTTAAATATATTCAATTGATTC
GGGAACAGGCttatatatttcaatttttttaaaaatttaaaaacacacTA
CTGCCAGTTTCACATTTAATGCGAACATCAGGTATAAAAATTCTCTGTAC
AATATGGTATAAATACTTATTCTACAGGGTGtccagaaaaaaagtaaatg
aagacttttacgaagaaaagtttttgaactttgaagagcttattctTTCT
TTCATTTATGTAGACTTGAGTGTCGTTTACCAAAGACACAAATCAACACG
TTAAGAGGAAAACCAACCAGGAATGCAACGGACGGAGGAGACGGTTCTGG
ACCTGAGGGAATCGTTGTTGGTCCACAGTTTATCGAAATTCACGACACTG
CACGTATGTCCATCTCCTTCTTTCTATGAagtgttttataagaaaattca
tcccagctggcacacaacgttgtatcatctaacgttatatggacgttgtg
aacgcatctaacgttatatggacgttatatggacgttagataaacgttga
aacaacgttgtgtgccagctgggtaaagCTTAGAACCTATTACTGCACCT
CCGTGTAGTCTCCTTCCTGTTGTTTTCTCCCTTTGAGTCTTTCCTCGTGT
GAGTCTCTCACATCAAAAGTCTTTGAAAAAGTTGTCCAATTTCTCACCGG
ACAGAATCAACTTCCAAACAGGATAACTTACGAACTTGAATTTGAAAGCc
ataaaaagagaaatatttcaTTCTGACTGGCAAAAACTTCCACCAGATCA
TTGAGACAGGGTGGTATTCTTAGGTGTCCAATGAATACCCCAACTGCTta
taaattttcgattttcggggATATTTATATCTGACAAGTAAATACTCCTC
GCTTATTAAGCACGTGAGAGTAAGTTTGTAAAacgataaaaatattttgt
acaattattaTTAGGATCAAACGCTTCATTCCGCATCGATTTCCAAGTTT
ACAAATCACTCCAATACGGTCACTCATACGGCAGAGAAGAGTTTCCAATC
TATTTGGCTGTCAGTAACAGAATCTACTTCGAAGTTAGCATcgataaaaa
agatttaagcaTCTTACCAAGAACCTGTTATGCTACCAAAACACAGAGTT
ACCAAGATGAACAGAGATATCATTTGATCCAAGATAGGTAGATACCCTGA
TTTGAACCTCTACATTATGATAACTGGCATCTCATGAAAGAGGATGCCTG
AGTCTGTATTGAGTGGTCTAAGAATTGTCTCCTTTTTAATCGTCTAAACT
GTAGTTTATAGTACCTACAAGCTTGTTTTTTTGATCAAGTGCGTTAATCC
GACGTGAACCACTAGGGAACAAGGCTAGCGCATTTCCACCACGATGTAGT
GTGAAATCAATGACTAGCACAGTAACTGATAATACTTGAGTTTCTGTCCA
CCCAATTCCTAATACACACAAGATGGATAGGCGAACTTGTTTGTTTCTCG
ATATTGGGAGTAGTCTAAAGCTTTGGCTGATAGGAAAACACTTCAGTTTG
AATTTAGTTCTTACAGTCCGAGTCAAAGCTGACTCTTTTAGTTTAGCTAA
CCGTtgcataaaaatattttctttcctcTCGACCACAGTTGTCCTAAAGA
CCAGACGTACGTCATGCACAATGACAACATCGCTAAAAACAAATTCCGCT
TCAGCGTCCAAGCATTCAACTTCAAAGATGGCGGAGATAGTATTTTCGTA
CACTGTCATACGTATGTATGCAAAAATCAAACGGATGAACAATGTCAATT
CGGCTGCCATAACAATGGAAAACGGTCTCGCAGAAGCATCGAGTTGAAAG
AAGAGGTTGAAGGCTACATGACCTCTACActagaaatcaaaatcaaggGT
AAGTTATACATAGTAACTACCCTTTTATAATTTCAACTAGGTTAAAGCAT
GGTATAAGAAAGCCGTatggttaaaggttttatttttaaataagtgtTTC
CGAATTCATATTAGAtacatattttatatcaggacagtgtctgtctattg
ttatattatgcagatataagcaaaaaatatttttcttttcctctttctga
ctaatcttgctccactccaaatgtgaaaaagctcgtaattaaaattgatg
agtaagcaaacgatatcactcttatttaaaaacaaaaaccttaaACTCGA
CTCTATTCAAATCTTGATTAAAATAAGCCAAGTCTTTCCTTGCCTTGCTT
CTTTAAGCAATTTTGAAGGGCAAAAGTATTTTCACAATCACTTTACCAAC
ACGATTCCtttattcaaaacatttttgttcTAATCACCTAGGCGACAAGA
TTGCAGTTATCCACAACAGATCATCCAGTGATGATGAGACAACAGACGAT
CAAAGCAAGACTATGTTGTTGTACCTTCAAATCCCTGTGGCCATCGCTGT
CTTCGGTCTCCTTTTCTTCGCTTACAAATGTCTCCAAAAGAGAAATGCTT
CTTCAAATGGTGGTGTCTTCTTTGAAGAAGAAATGaagttgaagaaaaat
gaaatgctGTAAATGCTTTGTTGTTGTAAGTTAAGGAAGTCAAAAATGCT
GGAGAAACTTTCGCTGAATTTGTAGAACAAACATCCCTCTACCACTAATG
CTGATAAAGAAAAGGCATGAGAGTAGCTTAATGTTCATTATAATCGAGCA
AGCTCTGGTATNAGCTGATAAAGAAAATACATTATAGCAGCTTAATGTTC
ATTATAATCGAGCAAGCTCTGGTATCAGCCTCAAAATTGTTTTAGTAATT
GCAGCGttgtgtttttttattaaacactttagatttttgttaaataaatt
ttgtaaccATATGACCTAGAAGATGTATTTATTGGGTGTATTTAAGTCAA
GGAATAGTTTTTCAATGAACATATAATCATAGattgtagattttttttca
aatttcgaaatatattttcaatataattttgttactCGCTAACTAAATAT
AATTCTTAGAAATTTTCTATCCAGGTAGGAAACGTCCCCTTATCTCCCTA
GCGATTGAAGGTCAGAGGTTGTTGCACCAAATTAAAGAGTAAGTGGTTGG
TG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016632XLOC_016632Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00029214-exon-sc0000730-1491911889:17586..17704TCONS_00029214-exon-sc0000730-1491911889:17586..17704Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1510915933:17586..17704TCONS_00029214-exon-sc0000730-1510915933:17586..17704Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1575043694:17586..17704TCONS_00029214-exon-sc0000730-1575043694:17586..17704Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1491911889:18102..18238TCONS_00029214-exon-sc0000730-1491911889:18102..18238Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1510915933:18102..18238TCONS_00029214-exon-sc0000730-1510915933:18102..18238Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1575043694:18102..18238TCONS_00029214-exon-sc0000730-1575043694:18102..18238Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1491911889:19525..19811TCONS_00029214-exon-sc0000730-1491911889:19525..19811Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1510915933:19525..19811TCONS_00029214-exon-sc0000730-1510915933:19525..19811Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1575043694:19525..19811TCONS_00029214-exon-sc0000730-1575043694:19525..19811Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1491911889:20266..20417TCONS_00029214-exon-sc0000730-1491911889:20266..20417Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1510915933:20266..20417TCONS_00029214-exon-sc0000730-1510915933:20266..20417Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1575043694:20266..20417TCONS_00029214-exon-sc0000730-1575043694:20266..20417Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1491911889:20842..20894TCONS_00029214-exon-sc0000730-1491911889:20842..20894Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1510915933:20842..20894TCONS_00029214-exon-sc0000730-1510915933:20842..20894Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1575043694:20842..20894TCONS_00029214-exon-sc0000730-1575043694:20842..20894Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1491911889:21148..21490TCONS_00029214-exon-sc0000730-1491911889:21148..21490Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1510915933:21148..21490TCONS_00029214-exon-sc0000730-1510915933:21148..21490Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1575043694:21148..21490TCONS_00029214-exon-sc0000730-1575043694:21148..21490Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1491911889:21766..21912TCONS_00029214-exon-sc0000730-1491911889:21766..21912Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1510915933:21766..21912TCONS_00029214-exon-sc0000730-1510915933:21766..21912Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1575043694:21766..21912TCONS_00029214-exon-sc0000730-1575043694:21766..21912Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1491911889:22521..22582TCONS_00029214-exon-sc0000730-1491911889:22521..22582Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1510915933:22521..22582TCONS_00029214-exon-sc0000730-1510915933:22521..22582Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1575043694:22521..22582TCONS_00029214-exon-sc0000730-1575043694:22521..22582Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1491911889:22829..22926TCONS_00029214-exon-sc0000730-1491911889:22829..22926Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1510915933:22829..22926TCONS_00029214-exon-sc0000730-1510915933:22829..22926Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1575043694:22829..22926TCONS_00029214-exon-sc0000730-1575043694:22829..22926Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1491911889:23808..24099TCONS_00029214-exon-sc0000730-1491911889:23808..24099Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1510915933:23808..24099TCONS_00029214-exon-sc0000730-1510915933:23808..24099Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1575043694:23808..24099TCONS_00029214-exon-sc0000730-1575043694:23808..24099Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1491911889:24774..24888TCONS_00029214-exon-sc0000730-1491911889:24774..24888Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1510915933:24774..24888TCONS_00029214-exon-sc0000730-1510915933:24774..24888Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1575043694:24774..24888TCONS_00029214-exon-sc0000730-1575043694:24774..24888Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1491911889:25915..26136TCONS_00029214-exon-sc0000730-1491911889:25915..26136Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1510915933:25915..26136TCONS_00029214-exon-sc0000730-1510915933:25915..26136Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1575043694:25915..26136TCONS_00029214-exon-sc0000730-1575043694:25915..26136Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1491911889:26999..27138TCONS_00029214-exon-sc0000730-1491911889:26999..27138Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1510915933:26999..27138TCONS_00029214-exon-sc0000730-1510915933:26999..27138Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1575043694:26999..27138TCONS_00029214-exon-sc0000730-1575043694:26999..27138Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1491911889:27700..27922TCONS_00029214-exon-sc0000730-1491911889:27700..27922Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1510915933:27700..27922TCONS_00029214-exon-sc0000730-1510915933:27700..27922Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1575043694:27700..27922TCONS_00029214-exon-sc0000730-1575043694:27700..27922Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1491911889:28374..28633TCONS_00029214-exon-sc0000730-1491911889:28374..28633Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1510915933:28374..28633TCONS_00029214-exon-sc0000730-1510915933:28374..28633Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1575043694:28374..28633TCONS_00029214-exon-sc0000730-1575043694:28374..28633Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1491911889:29077..29837TCONS_00029214-exon-sc0000730-1491911889:29077..29837Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1510915933:29077..29837TCONS_00029214-exon-sc0000730-1510915933:29077..29837Clytia hemisphaericaexon
TCONS_00029214-exon-sc0000730-1575043694:29077..29837TCONS_00029214-exon-sc0000730-1575043694:29077..29837Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000730supercontigsc0000730:17586..29837 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0.0410136	0.142637	0	0.312875	0	0.0344369	0	0	18.5618	0	0	0.12325	74.7987	103.005	30.9341	64.7545	213.469	67.7545	3.56392e-10	0.924201	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00029214 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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