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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042278 ID=TCONS_00042278|Name=TCONS_00042278|organism=Clytia hemisphaerica|type=transcript|length=1153bp
accaaagaagtgatattttcaaaaacatacaAATTTTGGAGCCAGCCAGT
GTTTTTGACAATGAAAACTGCTTTAATTGGGAAATGTTGGATTGACTGAT
GACATTTTACTCTTTAATGTCATTCTTCTCTACTAAGAAAGCTTGAGTTA
GGTGAAACCAAAGACTTGATTCTCAAACTCAACGTTTCCGATATGAACTT
ATTAGTTTGACGACAACACCTACCGAAAAAACTTTGAAGGACAAAGAGAT
GAAAGGcatattcaatgatgtatctatttaaatGTCCAAGTGTTTAGGGA
ATTGAAAGCCTGGAGGCTGGTTTAACAATTGTGTGTGATGAATTATTAAA
GGTCTGCGACACTCCCTTCGCGCCCTCTGGCTGGATTTATTTACATTCAC
GAGATATCGTGCACGACTAGATGTCCAAGTGGATTCTTGTATCACAACAG
ATCAACTTTAAATTAACTTATGACTGACAGAATCAGTGAGGAAAATATAC
TAGGATGAtctattacattgaaaatatgGTATTTGTTGTGAAAACACACT
TAAAATGACTTAAATCAATGTTGACGTGGAGTTTGGCGCACCATTTTAAG
GATTGACATCACGTGAAAGTGATAAGTTGGAATTTCTGgactattttgat
atttgaaagcCTTTTCTAAAGTATGTAAAGTAGAACTTTATTCCATTTTT
GCCAAACAgagaaagaattttgtaaaacggtcgaTTTATTACAGAGAAAT
AGAGAGATATATCTACTTCTGACTTTACGGAccgttttctcaaaataggt
ttcagtgggttttcgcacaccttggcaacgttttctcaggattggaaaGA
GCTatgatcatgaaattttcaggagttgCTCCATTTATGGTTTGCTATGG
AACGAATGGattagatttttggaaaaatctagaaaaatcaattttcgact
ttaaaactcaaattttccattttttaggttccagaccccctggaatgaaa
ttttgaaaaaattatccaTTCATTCCACAGCTTATCCAAATACTAGCAAc
ctccaaaaaaaacttttggaatAGCTTTATAGATTTTTCTGAAACGCTGC
CAAAGTATTTTGATAGTGTattaccccctggctgatattacccccgtctt
ggc Run BLAST on NCBI transcript from alignment at sc0003324:3754..4906 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042278 ID=TCONS_00042278|Name=TCONS_00042278|organism=Clytia hemisphaerica|type=transcript|length=1153bp|location=Sequence derived from alignment at sc0003324:3754..4906 (Clytia hemisphaerica)
gccaagacgggggtaatatcagccagggggtaatACACTATCAAAATACT
TTGGCAGCGTTTCAGAAAAATCTATAAAGCTattccaaaagttttttttg
gaggTTGCTAGTATTTGGATAAGCTGTGGAATGAAtggataattttttca
aaatttcattccagggggtctggaacctaaaaaatggaaaatttgagttt
taaagtcgaaaattgatttttctagatttttccaaaaatctaatCCATTC
GTTCCATAGCAAACCATAAATGGAGcaactcctgaaaatttcatgatcat
AGCTCtttccaatcctgagaaaacgttgccaaggtgtgcgaaaacccact
gaaacctattttgagaaaacggTCCGTAAAGTCAGAAGTAGATATATCTC
TCTATTTCTCTGTAATAAAtcgaccgttttacaaaattctttctcTGTTT
GGCAAAAATGGAATAAAGTTCTACTTTACATACTTTAGAAAAGgctttca
aatatcaaaatagtcCAGAAATTCCAACTTATCACTTTCACGTGATGTCA
ATCCTTAAAATGGTGCGCCAAACTCCACGTCAACATTGATTTAAGTCATT
TTAAGTGTGTTTTCACAACAAATACcatattttcaatgtaatagaTCATC
CTAGTATATTTTCCTCACTGATTCTGTCAGTCATAAGTTAATTTAAAGTT
GATCTGTTGTGATACAAGAATCCACTTGGACATCTAGTCGTGCACGATAT
CTCGTGAATGTAAATAAATCCAGCCAGAGGGCGCGAAGGGAGTGTCGCAG
ACCTTTAATAATTCATCACACACAATTGTTAAACCAGCCTCCAGGCTTTC
AATTCCCTAAACACTTGGACatttaaatagatacatcattgaatatgCCT
TTCATCTCTTTGTCCTTCAAAGTTTTTTCGGTAGGTGTTGTCGTCAAACT
AATAAGTTCATATCGGAAACGTTGAGTTTGAGAATCAAGTCTTTGGTTTC
ACCTAACTCAAGCTTTCTTAGTAGAGAAGAATGACATTAAAGAGTAAAAT
GTCATCAGTCAATCCAACATTTCCCAATTAAAGCAGTTTTCATTGTCAAA
AACACTGGCTGGCTCCAAAATTtgtatgtttttgaaaatatcacttcttt
ggt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042278-exon-sc0003324-1491911889:3754..4906 | TCONS_00042278-exon-sc0003324-1491911889:3754..4906 | Clytia hemisphaerica | exon |
| TCONS_00042278-exon-sc0003324-1510915933:3754..4906 | TCONS_00042278-exon-sc0003324-1510915933:3754..4906 | Clytia hemisphaerica | exon |
| TCONS_00042278-exon-sc0003324-1575043694:3754..4906 | TCONS_00042278-exon-sc0003324-1575043694:3754..4906 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003324 | supercontig | sc0003324:3754..4906 . |
Blast
The following BLAST results are available for this feature:
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