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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042393 ID=TCONS_00042393|Name=TCONS_00042393|organism=Clytia hemisphaerica|type=transcript|length=996bp
TTCACCGAAATCTATAGTACCAGCATCCTCCGAAGTTTTTGATGGAATTA
TTGGAACTGTTGAGCATATTTATGGACGGACTGAAAACCAATTATAAAGG
ATTAATATAGACAGATCCTGATCTGAAACCCTTACAATCTTGCACCCAGA
CCAACCTGCCTCGCTTTTGAATGCTACTAATGGGCATGAGAAATTCGTTT
AATAAATTCCTATCCTGAGAGTTATTTAGATCATGAAAATTCAAACTCag
agactgggttcgagtttgaaaGCTTTATAGAGACATGGACATGGTGGTAG
TAAAATGTTCAATGAACTAATTGTCATAAGCCGAAACAACTTAGAACAAA
CATGGCAACAATAGAAACAACAATTGGAATGctttcatttttgttgttgt
tttgattttgtatcgcGCTACCTACAGTTTGCTTTCATTAACCTGGTGAC
AATTGGTCATAACTTTCTTACGCGCATGCTAAACCTCTAAAGGTGCTTAA
AAATAACGAATTATGCAAAATAGTCAATTCTTGTTTGCATCGAGCTGTCA
TGAAATGAATTTGTCATTAATAAGGCGCCCTATTTCAAGAATATCCCGCT
ATaatttgttgtcattcccagtccttttagtgACGCGCTGAGCTTGTGAA
TCCAATATAACTTATTAGTGTCAGCTTGCTTGTTTTCAACCATCCCTTTA
GAACTGTCTGTGTGTGTGATCTGTTTTCAGGTTAAATTTCACATTCTTTA
ACGtctcttaagggctctggatatacgcaatttttcgattttacaccaac
ttaaatggcaatttctgcatttcaaaaagattaatgtataacttttttta
tatgtcctgttaaacttacctttttagaatttaaaaatcgaaaaattgag
atgaaaaaattaaatggagAAGAAAACGAagggtttttcgaagaagagta
tttcacctttcaaagccctaatctcggtaaaaatcaaacattttgg Run BLAST on NCBI transcript from alignment at sc0003393:7681..8676 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042393 ID=TCONS_00042393|Name=TCONS_00042393|organism=Clytia hemisphaerica|type=transcript|length=996bp|location=Sequence derived from alignment at sc0003393:7681..8676 (Clytia hemisphaerica)
ccaaaatgtttgatttttaccgagattagggctttgaaaggtgaaatact
cttcttcgaaaaaccctTCGTTTTCTTctccatttaattttttcatctca
atttttcgatttttaaattctaaaaaggtaagtttaacaggacatataaa
aaaagttatacattaatctttttgaaatgcagaaattgccatttaagttg
gtgtaaaatcgaaaaattgcgtatatccagagcccttaagagaCGTTAAA
GAATGTGAAATTTAACCTGAAAACAGATCACACACACAGACAGTTCTAAA
GGGATGGTTGAAAACAAGCAAGCTGACACTAATAAGTTATATTGGATTCA
CAAGCTCAGCGCGTcactaaaaggactgggaatgacaacaaattATAGCG
GGATATTCTTGAAATAGGGCGCCTTATTAATGACAAATTCATTTCATGAC
AGCTCGATGCAAACAAGAATTGACTATTTTGCATAATTCGTTATTTTTAA
GCACCTTTAGAGGTTTAGCATGCGCGTAAGAAAGTTATGACCAATTGTCA
CCAGGTTAATGAAAGCAAACTGTAGGTAGCgcgatacaaaatcaaaacaa
caacaaaaatgaaagCATTCCAATTGTTGTTTCTATTGTTGCCATGTTTG
TTCTAAGTTGTTTCGGCTTATGACAATTAGTTCATTGAACATTTTACTAC
CACCATGTCCATGTCTCTATAAAGCtttcaaactcgaacccagtctctGA
GTTTGAATTTTCATGATCTAAATAACTCTCAGGATAGGAATTTATTAAAC
GAATTTCTCATGCCCATTAGTAGCATTCAAAAGCGAGGCAGGTTGGTCTG
GGTGCAAGATTGTAAGGGTTTCAGATCAGGATCTGTCTATATTAATCCTT
TATAATTGGTTTTCAGTCCGTCCATAAATATGCTCAACAGTTCCAATAAT
TCCATCAAAAACTTCGGAGGATGCTGGTACTATAGATTTCGGTGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042393-exon-sc0003393-1491911889:7681..8676 | TCONS_00042393-exon-sc0003393-1491911889:7681..8676 | Clytia hemisphaerica | exon |
| TCONS_00042393-exon-sc0003393-1510915933:7681..8676 | TCONS_00042393-exon-sc0003393-1510915933:7681..8676 | Clytia hemisphaerica | exon |
| TCONS_00042393-exon-sc0003393-1575043694:7681..8676 | TCONS_00042393-exon-sc0003393-1575043694:7681..8676 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003393 | supercontig | sc0003393:7681..8676 . |
Blast
The following BLAST results are available for this feature:
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