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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042997 ID=TCONS_00042997|Name=TCONS_00042997|organism=Clytia hemisphaerica|type=transcript|length=1198bp
cttgagttctactaaaaagtcgtatttcgtcgggcgagcctagaatttct
tttgatttattacataaaagaaatcaaaaggcTTTCACGACCAATTACAg
tcaaattcatctcctgtctttctttatacctctatgttTCACTGAAACTT
TAACTTGAGTATAAAAGACTGATTGACAATGCAACGCAGACTATTTCATG
AAGGAAGTAATGCATCATAAACTCTCGACGCctagatatttttcaattta
ttgtacTCTTATTAGATCAATATAATTCTATCATTATTTTTAAAAAATAC
ATGGAAAAGATATACCTTAATTAGTCTATCTTGTCACCTTGGTTTGGGAG
GTGACGAATATATCTGAGCCAAAACCGAAAATAGACCCTTAGAGaggtaa
aatttactttttttgggAACCCTTGGAAAGACTTTTCCCTAAATTTGGTC
GATTTTCACCAAGTTTTGTTCGAATTTTGACCCTTTCTGAGGGAAATTCt
cgatttttgtgattttggaaCCTTTTcttcagagactaacttataAATCT
ACACCCCAttcgagagacttttgaggTGTGAAAAAAGATATCCTTATGGC
TCGTACATACCCGTCTCCTGTTTTGACCAAGTGCACCCGTTGGGCTTCTT
TGCTATGCTATCAAAATGTTCGAATAGTGCCTTCAAAGTTCCCAATAGCC
AGAACATTCGGATTTGGAGAATTTAAATAGACTTCTAAAGTAGTGTTTTC
TCCGCAGAAGGGCCTTTTGCGAACTTTCTACTTGATATTCGACCTTTGAA
TCAGTATACGTCTGTGATAGATTCTCATGGCGTTATACTCTGCAACTATC
GTCACTTGAAGGACTGCCAAATGCCGGAGCCAAGAGTGCTATATGTTCAC
CTCTTTTCAGCTGGAAATACAGTGCCGTTCCCATTAAATACTGTAATCAT
TCTAGGCAATTTTGGGACagttatttttccatttttatttccagctggaa
atagagagccGTTCCCATAAAATATCTGTATTGCTCtgacatttttcctt
ttttatctccagctggaaatagagagccGTTCCCATAACATATCTATATT
GCTCTGACGTTTGCtacatttattttcctttttcatctccagctggaaat
aaagAGCCGTTCCTATAAATTTGTATATCTCCTCCTGGCAGATATGAA Run BLAST on NCBI transcript from alignment at sc0003840:1350..2547 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042997 ID=TCONS_00042997|Name=TCONS_00042997|organism=Clytia hemisphaerica|type=transcript|length=1198bp|location=Sequence derived from alignment at sc0003840:1350..2547 (Clytia hemisphaerica)
TTCATATCTGCCAGGAGGAGATATACAAATTTATAGGAACGGCTctttat
ttccagctggagatgaaaaaggaaaataaatgtaGCAAACGTCAGAGCAA
TATAGATATGTTATGGGAACggctctctatttccagctggagataaaaaa
ggaaaaatgtcaGAGCAATACAGATATTTTATGGGAACggctctctattt
ccagctggaaataaaaatggaaaaataactGTCCCAAAATTGCCTAGAAT
GATTACAGTATTTAATGGGAACGGCACTGTATTTCCAGCTGAAAAGAGGT
GAACATATAGCACTCTTGGCTCCGGCATTTGGCAGTCCTTCAAGTGACGA
TAGTTGCAGAGTATAACGCCATGAGAATCTATCACAGACGTATACTGATT
CAAAGGTCGAATATCAAGTAGAAAGTTCGCAAAAGGCCCTTCTGCGGAGA
AAACACTACTTTAGAAGTCTATTTAAATTCTCCAAATCCGAATGTTCTGG
CTATTGGGAACTTTGAAGGCACTATTCGAACATTTTGATAGCATAGCAAA
GAAGCCCAACGGGTGCACTTGGTCAAAACAGGAGACGGGTATGTACGAGC
CATAAGGATATCTTTTTTCACAcctcaaaagtctctcgaaTGGGGTGTAG
ATTtataagttagtctctgaagAAAAGGttccaaaatcacaaaaatcgaG
AATTTCCCTCAGAAAGGGTCAAAATTCGAACAAAACTTGGTGAAAATCGA
CCAAATTTAGGGAAAAGTCTTTCCAAGGGTTcccaaaaaaagtaaatttt
acctCTCTAAGGGTCTATTTTCGGTTTTGGCTCAGATATATTCGTCACCT
CCCAAACCAAGGTGACAAGATAGACTAATTAAGGTATATCTTTTCCATGT
ATTTTTTAAAAATAATGATAGAATTATATTGATCTAATAAGAgtacaata
aattgaaaaatatctagGCGTCGAGAGTTTATGATGCATTACTTCCTTCA
TGAAATAGTCTGCGTTGCATTGTCAATCAGTCTTTTATACTCAAGTTAAA
GTTTCAGTGAaacatagaggtataaagaaagacaggagatgaatttgacT
GTAATTGGTCGTGAAAgccttttgatttcttttatgtaataaatcaaaag
aaattctaggctcgcccgacgaaatacgactttttagtagaactcaag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042997-exon-sc0003840-1491911889:1350..2547 | TCONS_00042997-exon-sc0003840-1491911889:1350..2547 | Clytia hemisphaerica | exon |
| TCONS_00042997-exon-sc0003840-1510915933:1350..2547 | TCONS_00042997-exon-sc0003840-1510915933:1350..2547 | Clytia hemisphaerica | exon |
| TCONS_00042997-exon-sc0003840-1575043694:1350..2547 | TCONS_00042997-exon-sc0003840-1575043694:1350..2547 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003840 | supercontig | sc0003840:1350..2547 . |
Blast
The following BLAST results are available for this feature:
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