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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00043966 ID=TCONS_00043966|Name=TCONS_00043966|organism=Clytia hemisphaerica|type=transcript|length=498bp
ACTCACAAGTCAAAGACAAATCTGCAATGTCCATTATTGTCCAGAAATGT
GTGATGAATTTTTCAAGATGTGTGATTGTATTGACGTGCCAGTAATTTAT
GATATGAGCATCCTCACAACAAACTCTTCATTTTATGGAATCAACGATAC
TGCGGTCAATTCTTCTCTTGATGCAATTTCCACCTGGGATGCAGAAGCTG
TCAAACTTGCATGTAAAAATGCTCAATGCAGTGAGACAAGTCTTCAAAGT
GCAATCACACAAATCGAAGCTGATGTCAACACTCTGCAGTCATTTATTGA
CGATGCTTCCAGCTCAATAAAACTCACACGAAAAGTCATCAGTTGTAAAG
CCAATGTTTGGGGCAGGAGGGGTGAATTATTTGAGCACTatcaaatactt
tttaaaaagaaagtcaTAGTTCGACAAGTGTACCAGGATTTGGAAATCAA
GAAAAGGATTTTGGAGAAGGAAAAGTTGAGATGTGCCGATAGAAGTAA Run BLAST on NCBI transcript from alignment at sc0004785:4010..5057+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00043966 ID=TCONS_00043966|Name=TCONS_00043966|organism=Clytia hemisphaerica|type=transcript|length=1048bp|location=Sequence derived from alignment at sc0004785:4010..5057+ (Clytia hemisphaerica)
ACTCACAAGTCAAAGACAAATCTGCAATGTCCATTATTGTCCAGGTATCA
TATCGTATACTAAATTTACAATGATTTAAATTTAAAACCTCTTCAAATTA
TCTAGCTTGGCTATGGTATTCTTATTTGCTTATGAAGGTatatttttaaa
cgtttttcaaGCTTTAAGACgtatcttaaaatgttctactTTTCGAGTAG
AAGTAGTAGTTTGGTGAGGTTTCCTAGGAAATCGCTCTATGTTTTAGAGT
CTGTAAAGACTTAAATGTGCATAGAATGTTCTTGAAACGTTGAATCATAA
GACTAATCATCTAATGACTATTTTAATTTCTAGAAATGTGTGATGAATTT
TTCAAGATGTGTGATTGTATTGACGTGCCAGTAATTTATGATATGAGCAT
CCTCACAACAAACTCTTCATTTTATGGAATCAACGATACTGCGGTCAATT
CTTCTCTTGATGCAATTTCCACCTGGGATGCAGAAGCTGTCAAACTTGCA
TGTAAAAGTAAGTGAATCGTCCTTTTCAACATTTATACTATGAGCATTTC
CTTTTGAATATCAGTGACTGTAAATACGATTTTACATGTAGTAGTTGAAT
TCAAAGATGGGGAGTAGATAAGTAGGTGTCGGCCCGGTTATATGAGTGCG
GTAGAATacggttttttatttttccaatccAAATGAGACAACACTAATTC
TTCAATTTATGatgcaatttcttaaaattcttatatttctttcctttttt
aaatttccttttCTATAGATGCTCAATGCAGTGAGACAAGTCTTCAAAGT
GCAATCACACAAATCGAAGCTGATGTCAACACTCTGCAGTCATTTATTGA
CGATGCTTCCAGCTCAATAAAACTCACACGAAAAGTCATCAGTTGTAAAG
CCAATGTTTGGGGCAGGAGGGGTGAATTATTTGAGCACTatcaaatactt
tttaaaaagaaagtcaTAGTTCGACAAGTGTACCAGGATTTGGAAATCAA
GAAAAGGATTTTGGAGAAGGAAAAGTTGAGATGTGCCGATAGAAGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00043966-exon-sc0004785-1491911889:4010..4053 | TCONS_00043966-exon-sc0004785-1491911889:4010..4053 | Clytia hemisphaerica | exon |
| TCONS_00043966-exon-sc0004785-1510915933:4010..4053 | TCONS_00043966-exon-sc0004785-1510915933:4010..4053 | Clytia hemisphaerica | exon |
| TCONS_00043966-exon-sc0004785-1575043694:4010..4053 | TCONS_00043966-exon-sc0004785-1575043694:4010..4053 | Clytia hemisphaerica | exon |
| TCONS_00043966-exon-sc0004785-1491911889:4343..4516 | TCONS_00043966-exon-sc0004785-1491911889:4343..4516 | Clytia hemisphaerica | exon |
| TCONS_00043966-exon-sc0004785-1510915933:4343..4516 | TCONS_00043966-exon-sc0004785-1510915933:4343..4516 | Clytia hemisphaerica | exon |
| TCONS_00043966-exon-sc0004785-1575043694:4343..4516 | TCONS_00043966-exon-sc0004785-1575043694:4343..4516 | Clytia hemisphaerica | exon |
| TCONS_00043966-exon-sc0004785-1491911889:4778..5057 | TCONS_00043966-exon-sc0004785-1491911889:4778..5057 | Clytia hemisphaerica | exon |
| TCONS_00043966-exon-sc0004785-1510915933:4778..5057 | TCONS_00043966-exon-sc0004785-1510915933:4778..5057 | Clytia hemisphaerica | exon |
| TCONS_00043966-exon-sc0004785-1575043694:4778..5057 | TCONS_00043966-exon-sc0004785-1575043694:4778..5057 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004785 | supercontig | sc0004785:4010..5057 + |
Blast
The following BLAST results are available for this feature:
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