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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044030 ID=TCONS_00044030|Name=TCONS_00044030|organism=Clytia hemisphaerica|type=transcript|length=1638bp
CTCAAAATATGtataataaatactttttgaatggttaattgcatcaaaga
agcgcaaataatgtgtatttcaacaaccaacatgcatgatttgacagtgg
aaatcaaaaatattgcgaaaatattgccacccaatagtgccaaacgccaa
attaagtccccgcgaaatttttgaatttcgtggttaggctcaaccgcgaa
atttaatccccgcgaaagtttaccccattaaagtaaataaaaaaaattga
aattacattAGAGTAATTAGGGCAAAAAAGAGGGCCTTTCAAATGTGATA
ACTtctaaatatttctaaaatgaaACGGTGGGATCCTAATCGagaaagaa
aacgaaatatCTCTCTTTTATGTTTGTAAGAAAgcattcatgatatgcac
cattgcaatgtcttcgacATCACATCACGGAACCAAtcgctgattggttg
taagtgacgtaaaatcattcaatacgtccacttgcaaccaatcagctgct
aGGTTCGtggaagacattacaatggtgcaTACCTTGAAGACACTCACTaa
tttatgttttcttttattcCGAAGATcccaggtgcctaataaacaggggg
tagaaaaatcttcaatttttaattGGCAGGGGGGGCGACCTATTGCAGCA
GAGGGGTTGGAAATTATACCCTTGAAGAGCCGaagaataaggtaaatata
ggctaaaactAGAGAATTAAAAAAGGACTCTTCTTTtggcagctgaaaat
atttcaaaaatgaggggaggggattggaaaaaaaatcggtGGGTTGGCGT
AGGGCGGAggcgtttattaggcacccaagAGTAAGTGAACATTCCAAACT
AATTCTCAATCCATATCAGTTAGAATTACCTTTGTCCATAGTGTTCACTT
CTCAGTATTCAACAGAGAAAAATACTAATTTATCACGAAGTAAGTCAAAC
AAAGCCACTATTTAACAAAAaacgaattcttttcaaatgtCCAGTCGACT
AGAGTGAACAATACACCATTGTTCCTTCTAAGAGTATCTTTGTTAGAAAG
GTCAAAAGAGTTTAAAAGTAAACCACATATTCCGGTAGTGAGTAGATGAC
AAGGTGACCTGAAACAGATCTAATACGAAACCTGTATCACCAGGTTCCTG
TCTGTAACCAGGGTTGCTATTTCAAATAACTTTGTTTCGAAAACGATTTC
ACCTTTCCTGCAAGATCAAGATCTCCATACACCAACAACAACTTTCGCTA
AATGACCAATCGAGAAATGCAAATACAAACTTTTGTGTAGATTACAATCA
ATGAAAGGAAAccaaaaaaatctcaatccacTTCCATTTTGTTTTCTGCC
GGTATCGACACATCGTTCGGTATTTTATCAACATTCTGGTTCTGTAAATT
ACCATCTTCAGTTTTTAAAGTATCTAACATAATACAATCCCCATTAACAA
CAGTTTCCGTAGTATCCGCGCCATTTTCTTTCGCTCCGTTGCTTAGCAAC
ATTGTTTCTTTGAGTACTGGATAAGTCAACCCACAACCGAGCTCTAAATC
TGCTATACCGTATTTCTGAAGAATATCAACATTAACTGTATAACAAATCT
TCCCCAACTTTTCATTGGGACCTTTCGTAGCAATTTCT Run BLAST on NCBI transcript from alignment at sc0004866:15..1712+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044030 ID=TCONS_00044030|Name=TCONS_00044030|organism=Clytia hemisphaerica|type=transcript|length=1698bp|location=Sequence derived from alignment at sc0004866:15..1712+ (Clytia hemisphaerica)
CTCAAAATATGtataataaatactttttgaatggttaattgcatcaaaga
agcgcaaataatgtgtatttcaacaaccaacatgcatgatttgacagtgg
aaatcaaaaatattgcgaaaatattgccacccaatagtgccaaacgccaa
attaagtccccgcgaaatttttgaatttcgtggttaggctcaaccgcgaa
atttaatccccgcgaaagtttaccccattaaagtaaataaaaaaaattga
aattacattAGAGTAATTAGGGCAAAAAAGAGGGCCTTTCAAATGTGATA
ACTtctaaatatttctaaaatgaaACGGTGGGATCCTAATCGagaaagaa
aacgaaatatCTCTCTTTTATGTTTGTAAGAAAgcattcatgatatgcac
cattgcaatgtcttcgacATCACATCACGGAACCAAtcgctgattggttg
taagtgacgtaaaatcattcaatacgtccacttgcaaccaatcagctgct
aGGTTCGtggaagacattacaatggtgcaTACCTTGAAGACACTCACTaa
tttatgttttcttttattcCGAAGATcccaggtgcctaataaacaggggg
tagaaaaatcttcaatttttaattGGCAGGGGGGGCGACCTATTGCAGCA
GAGGGGTTGGAAATTATACCCTTGAAGAGCCGaagaataaggtaaatata
ggctaaaactAGAGAATTAAAAAAGGACTCTTCTTTtggcagctgaaaat
atttcaaaaatgaggggaggggattggaaaaaaaatcggtGGGTTGGCGT
AGGGCGGAggcgtttattaggcacccaagAGTAAGTGAACATTCCNCGGT
GGGTTGGCGTAGGGCGGAggcgtttattaggcacccaagAGTAAGTGAAC
ATTCCAAACTAATTCTCAATCCATATCAGTTAGAATTACCTTTGTCCATA
GTGTTCACTTCTCAGTATTCAACAGAGAAAAATACTAATTTATCACGAAG
TAAGTCAAACAAAGCCACTATTTAACAAAAaacgaattcttttcaaatgt
CCAGTCGACTAGAGTGAACAATACACCATTGTTCCTTCTAAGAGTATCTT
TGTTAGAAAGGTCAAAAGAGTTTAAAAGTAAACCACATATTCCGGTAGTG
AGTAGATGACAAGGTGACCTGAAACAGATCTAATACGAAACCTGTATCAC
CAGGTTCCTGTCTGTAACCAGGGTTGCTATTTCAAATAACTTTGTTTCGA
AAACGATTTCACCTTTCCTGCAAGATCAAGATCTCCATACACCAACAACA
ACTTTCGCTAAATGACCAATCGAGAAATGCAAATACAAACTTTTGTGTAG
ATTACAATCAATGAAAGGAAAccaaaaaaatctcaatccacTTCCATTTT
GTTTTCTGCCGGTATCGACACATCGTTCGGTATTTTATCAACATTCTGGT
TCTGTAAATTACCATCTTCAGTTTTTAAAGTATCTAACATAATACAATCC
CCATTAACAACAGTTTCCGTAGTATCCGCGCCATTTTCTTTCGCTCCGTT
GCTTAGCAACATTGTTTCTTTGAGTACTGGATAAGTCAACCCACAACCGA
GCTCTAAATCTGCTATACCGTATTTCTGAAGAATATCAACATTAACTGTA
TAACAAATCTTCCCCAACTTTTCATTGGGACCTTTCGTAGCAATTTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044030-exon-sc0004866-1491911889:15..823 | TCONS_00044030-exon-sc0004866-1491911889:15..823 | Clytia hemisphaerica | exon |
| TCONS_00044030-exon-sc0004866-1510915933:15..823 | TCONS_00044030-exon-sc0004866-1510915933:15..823 | Clytia hemisphaerica | exon |
| TCONS_00044030-exon-sc0004866-1575043694:15..823 | TCONS_00044030-exon-sc0004866-1575043694:15..823 | Clytia hemisphaerica | exon |
| TCONS_00044030-exon-sc0004866-1491911889:884..1712 | TCONS_00044030-exon-sc0004866-1491911889:884..1712 | Clytia hemisphaerica | exon |
| TCONS_00044030-exon-sc0004866-1510915933:884..1712 | TCONS_00044030-exon-sc0004866-1510915933:884..1712 | Clytia hemisphaerica | exon |
| TCONS_00044030-exon-sc0004866-1575043694:884..1712 | TCONS_00044030-exon-sc0004866-1575043694:884..1712 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004866 | supercontig | sc0004866:15..1712 + |
Blast
The following BLAST results are available for this feature:
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