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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044173 ID=TCONS_00044173|Name=TCONS_00044173|organism=Clytia hemisphaerica|type=transcript|length=1040bp
AGAGTACTTCCTTAGTTTTTCAATTTCTGTTGAATATATTGAGAGATTTT
GTTAGTGGAGAATTTTTTGGTTTTCTGGGTATGTCTTAAAGGAATCTTTC
AAAACGGGTTTTTTCTGTAATCTGACCAAATTTAGTTGAAATGAGTACTA
GGGAACCATGCACTTGACTTTATGTTACAGCAAGGAACGAGGttccttgt
tttttttacaaaaaacgcCCCAGTCATAAGTCCGAGGTGCATTAAGATAT
CAATGGTACATAACTCATTTCGAGATAAGTGTtgaggttttttttaattt
ttttaggttttgaaaGTGTTTAAATTGTAAAATTCTCACCGGTGATGAAG
GCGTTGTTCAAGTTGTTGTTAGCCATCTCCTGAATGTCTTGTCTCTTGGA
AATCCTCGTGGTGAAAGAGGGTTTCCCTGTCGAGGGCGTTGGATCTGGCA
TATTTTCGCTTATTGTTTTTCTGTGGTTTTCATGTATTGTTTTTTTGTGG
ATTCTCTATTGTTCTATATGATTTCCGTGGTTTTTATTGGCTGATTCTAT
GATTTTATTTTGGTCCGTTTCTCCATGGGTCGCTTTGAGTGGTTTTGATT
GGTCTGTTAATCGTCTCAGATGTTTATTACCCGAAGCAGCGTGAGCGCTA
TATTATTGTTTGATACGGCTTTATGTTGTTGTTTCTCTGTTGTGATCTCT
CAATTTTTTGCTGTGATTTCTCAATTCCTAATGTCATCTTTTAgcgtttc
ttgttgtttttgtatttctattgtctgattggttgatatgtccttttgtt
ttttcattattCTTACGTGTTTTGGTGTGTGTTATTTTTGTTCATGGGTT
GTTTTCGTGTGTGTTTTTGTTCAAGAGTTGGGATTACTCAAGAATGGGCT
GCAAACTTTccttttgacgttttttttgtgtgtttgttttattttttagt
tttgttagtgtgtttgttgtttgttttacttctttttgtttgcattttgt
GATTTTGTCTGTGTAGAGGCGAGAGAGACGGAGGGGGATC Run BLAST on NCBI transcript from alignment at sc0005111:3653..4692 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044173 ID=TCONS_00044173|Name=TCONS_00044173|organism=Clytia hemisphaerica|type=transcript|length=1040bp|location=Sequence derived from alignment at sc0005111:3653..4692 (Clytia hemisphaerica)
GATCCCCCTCCGTCTCTCTCGCCTCTACACAGACAAAATCacaaaatgca
aacaaaaagaagtaaaacaaacaacaaacacactaacaaaactaaaaaat
aaaacaaacacacaaaaaaaacgtcaaaaggAAAGTTTGCAGCCCATTCT
TGAGTAATCCCAACTCTTGAACAAAAACACACACGAAAACAACCCATGAA
CAAAAATAACACACACCAAAACACGTAAGaataatgaaaaaacaaaagga
catatcaaccaatcagacaatagaaatacaaaaacaacaagaaacgcTAA
AAGATGACATTAGGAATTGAGAAATCACAGCAAAAAATTGAGAGATCACA
ACAGAGAAACAACAACATAAAGCCGTATCAAACAATAATATAGCGCTCAC
GCTGCTTCGGGTAATAAACATCTGAGACGATTAACAGACCAATCAAAACC
ACTCAAAGCGACCCATGGAGAAACGGACCAAAATAAAATCATAGAATCAG
CCAATAAAAACCACGGAAATCATATAGAACAATAGAGAATCCACAAAAAA
ACAATACATGAAAACCACAGAAAAACAATAAGCGAAAATATGCCAGATCC
AACGCCCTCGACAGGGAAACCCTCTTTCACCACGAGGATTTCCAAGAGAC
AAGACATTCAGGAGATGGCTAACAACAACTTGAACAACGCCTTCATCACC
GGTGAGAATTTTACAATTTAAACACtttcaaaacctaaaaaaattaaaaa
aaacctcaACACTTATCTCGAAATGAGTTATGTACCATTGATATCTTAAT
GCACCTCGGACTTATGACTGGGgcgttttttgtaaaaaaaacaaggaaCC
TCGTTCCTTGCTGTAACATAAAGTCAAGTGCATGGTTCCCTAGTACTCAT
TTCAACTAAATTTGGTCAGATTACAGAAAAAACCCGTTTTGAAAGATTCC
TTTAAGACATACCCAGAAAACCAAAAAATTCTCCACTAACAAAATCTCTC
AATATATTCAACAGAAATTGAAAAACTAAGGAAGTACTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044173-exon-sc0005111-1491911889:3653..4692 | TCONS_00044173-exon-sc0005111-1491911889:3653..4692 | Clytia hemisphaerica | exon |
| TCONS_00044173-exon-sc0005111-1510915933:3653..4692 | TCONS_00044173-exon-sc0005111-1510915933:3653..4692 | Clytia hemisphaerica | exon |
| TCONS_00044173-exon-sc0005111-1575043694:3653..4692 | TCONS_00044173-exon-sc0005111-1575043694:3653..4692 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005111 | supercontig | sc0005111:3653..4692 . |
Blast
The following BLAST results are available for this feature:
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