TCONS_00044211 (transcript) - C. hemisphaerica

Overview
NameTCONS_00044211
Unique NameTCONS_00044211
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length135

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00044211 ID=TCONS_00044211|Name=TCONS_00044211|organism=Clytia hemisphaerica|type=transcript|length=135bp
GTTTGTTTTGTCTCTCACACTTACCTGTATGGCCACACCTTCACAGTTTT
CATTCATGGCCTAACTGTTTGACGGTATTGAAATATcaattcaacaattt
caatcgtTTGAACGTGACCATATGCGGTAAACCcc
Run BLAST on NCBI

transcript from alignment at sc0005168:3313..3738+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00044211 ID=TCONS_00044211|Name=TCONS_00044211|organism=Clytia hemisphaerica|type=transcript|length=426bp|location=Sequence derived from alignment at sc0005168:3313..3738+ (Clytia hemisphaerica)
GTTTGTTTTGTCTCTCACACTTACCTGTATGGCCACACCTTCACAGTTTT
CATTCATGGCCTAACTGGTAAGTCAGCCATCTTGTttctgcttttttctt
tttacatttaGGTTAAGGTTAAGTTAGACATAGACATTATATATTTATAT
ACTCATAGCTCTTTTATTCAGATCTTCATATTGTATTCATGGTCTACTTG
ACCTCAGGCACTCTTACTTCTGGACTTAgccatttttcactcatttggac
tttgtcgttttttgctcattttcgaCTTAGCctcatttcattttcaatta
tcaattaCTCATGTACGAACTAGATATTTATTAGCATTCATTCATTATAT
TTATTTAGTTTGACGGTATTGAAATATcaattcaacaatttcaatcgtTT
GAACGTGACCATATGCGGTAAACCcc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_027855XLOC_027855Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00044211-exon-sc0005168-1491911889:3313..3379TCONS_00044211-exon-sc0005168-1491911889:3313..3379Clytia hemisphaericaexon
TCONS_00044211-exon-sc0005168-1510915933:3313..3379TCONS_00044211-exon-sc0005168-1510915933:3313..3379Clytia hemisphaericaexon
TCONS_00044211-exon-sc0005168-1575043694:3313..3379TCONS_00044211-exon-sc0005168-1575043694:3313..3379Clytia hemisphaericaexon
TCONS_00044211-exon-sc0005168-1491911889:3671..3738TCONS_00044211-exon-sc0005168-1491911889:3671..3738Clytia hemisphaericaexon
TCONS_00044211-exon-sc0005168-1510915933:3671..3738TCONS_00044211-exon-sc0005168-1510915933:3671..3738Clytia hemisphaericaexon
TCONS_00044211-exon-sc0005168-1575043694:3671..3738TCONS_00044211-exon-sc0005168-1575043694:3671..3738Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0005168supercontigsc0005168:3313..3738 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044211 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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