TCONS_00044266 (transcript) - C. hemisphaerica

Overview
NameTCONS_00044266
Unique NameTCONS_00044266
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length762

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00044266 ID=TCONS_00044266|Name=TCONS_00044266|organism=Clytia hemisphaerica|type=transcript|length=762bp
CAGTCAACGGCGATTGGGGCAAATGGGGAGGATTCAATTCTTGTAACAAA
CGATGTGGAGGAGGTCTACAAACGAGATACAGATCATGTAATAACCCAAC
ACCTGCACATGGTGGAAAATCATGTCCTGGTTCTCCCGCTCACTCACAAT
CATGCAACACTCATAAATGTCCAGTCAATGGCAATTGGGGATCATGGGGT
TCATATGGATCATGTAACAATAAATGTGGTGGAGGTGTTCAAGAACGATT
CCGTTATTGTAATAATCCCGCCCCCGCCCATGGTGGTAAAGGATGTCCTG
GATACGCCAAAATGGTCAGAGCTTGCAATACTCATAAATGCCCAGTAAAC
GGTAATTGGGGCAAATGGGGAGGCTTCAATTCTTGCAACAAACGATGTGG
AGGAGGTCTACAAACAAGATACAGATCATGCAATAACCCAACACCTGCTC
ATGGTGGAAAATCATGTCCTGGTTCTCACGCTCACTCGNGATACAGATCA
TGCAATAACCCAACACCTGCTCATGGTGGAAAATCATGTCCTGGTTCTCA
CGCTCACTCGCAATCATGCAACACTCAAAAATGCCCAGTTAATGGAAAGT
GGGGATCATGGGGCTCATATGGATCATGTAACAATAAATGTGGTGGAGGT
GTTCAAGAACGATTCCGTTATTGTAATAATCCCGCCCCCGCCCATGGTGG
TAGTGGTTGCCCTGGATACGCCAAAATGGTCAGAGCTTGCAATACACACA
AGTGCCCAGGTA
Run BLAST on NCBI

protein sequence of TCONS_00044266-protein

>TCONS_00044266-protein ID=TCONS_00044266-protein|Name=TCONS_00044266-protein|organism=Clytia hemisphaerica|type=polypeptide|length=253bp
VNGDWGKWGGFNSCNKRCGGGLQTRYRSCNNPTPAHGGKSCPGSPAHSQS
CNTHKCPVNGNWGSWGSYGSCNNKCGGGVQERFRYCNNPAPAHGGKGCPG
YAKMVRACNTHKCPVNGNWGKWGGFNSCNKRCGGGLQTRYRSCNNPTPAH
GGKSCPGSHAHSXYRSCNNPTPAHGGKSCPGSHAHSQSCNTQKCPVNGKW
GSWGSYGSCNNKCGGGVQERFRYCNNPAPAHGGSGCPGYAKMVRACNTHK
CPG
Run BLAST on NCBI

transcript from alignment at sc0005268:106..4343-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00044266 ID=TCONS_00044266|Name=TCONS_00044266|organism=Clytia hemisphaerica|type=transcript|length=4238bp|location=Sequence derived from alignment at sc0005268:106..4343- (Clytia hemisphaerica)
CAGTCAACGGCGATTGGGGCAAATGGGGAGGATTCAATTCTTGTAACAAA CGATGTGGAGGAGGTCTACAAACGAGATACAGATCATGTAATAACCCAAC ACCTGCACATGGTGGAAAATCATGTCCTGGTTCTCCCGCTCACTCACAAT CATGCAACACTCATAAATGTCCAGGTATTGTCTCTGAACATTATTTAAAA AATCAGAAATTTCTATAAAGGTTCTTTTGAAAAGCCATCTATGAATGTGT TTGAAAACTTTGATAGACACGCTTGTTTTTTTATAAGAACCAGTAAATTT TCGCTGAGCCTGAGATTGTTCTTAAATTTATATTGTTCCAAACAATAGAG CTATTGTTCTGAGGTCCTAAATCCGAGGTTTTTTCTCTTAAAAAATTGTT CTTATAAATAAAAAAGCGTGTGAACATAGTCTCATACTGCATAAACGTTG GTCTTATGGTAAAGTAGTGATAGGTATCTTCTTGCCATGTATTTTTCTTT AAGGCGATAAAAAAGTTCACTCTACCCTTTCTCTTACACAGTCAATGGCA ATTGGGGATCATGGGGTTCATATGGATCATGTAACAATAAATGTGGTGGA GGTGTTCAAGAACGATTCCGTTATTGTAATAATCCCGCCCCCGCCCATGG TGGTAAAGGATGTCCTGGATACGCCAAAATGGTCAGAGCTTGCAATACTC ATAAATGCCCAGGTGAATATTTTTATCTGTCATGTTATGCCAGTAACTGA TGAAAATTAGTGTGTTGGGTTTTGTAAATTCTAGTTCCAGGAACTATTGA AACTGATTTTTCCATCTTCAATCAATAGCACAAGCACTGACCTTTATAAA CCCTAGACCAAGCTATATTCATCATNATCGATCAAGTTTGATTGTATTGT GTAGCGCTATTTAAAGATTCATTCCTGAGTCACTTTTGAAGTAGAAAAGG TTTGATCAATCATATTCCATGAATTACTGTTTTTATGTTTTCAGTAAACG GTAATTGGGGCAAATGGGGAGGCTTCAATTCTTGCAACAAACGATGTGGA GGAGGTCTACAAACAAGATACAGATCATGCAATAACCCAACACCTGCTCA TGGTGGAAAATCATGTCCTGGTTCTCACGCTCACTCGNGATACAGATCAT GCAATAACCCAACACCTGCTCATGGTGGAAAATCATGTCCTGGTTCTCAC GCTCACTCGCAATCATGCAACACTCAAAAATGCCCAGGTATTTTTACGCT TGTTTTTCACTTGTTTTTAAAGGGTTAGTTTAATCGGATGTTTGAAATCT AGGACCAGTAGATTCCTCGTGCGGTCTAGAGGAAAAATTCCAAATATTCA ACTTACAGCTTTTTTACTTACTTTTAACGAGATAGACATTTCTTTCTTAT AAGAAAGTCGTAAATTTTTGAAGCCTTTGGATGTTCTTAGAATGTTCTTA ACATATTCTTATTTTCACTATTTTTTGAGTAATTTTTTCCATTTTCCTAG AGGGTTTTAGTGTCCGCAAAGCCTTAAAATATTCTTAACTTATGTTCTTA ATATTTTGGCCATCGAAGTTTTTTGTTCTTATATAGCTCTTGTGAAAAAA AATGTGTAAAAAGAGAATTTAAATTTGGTTTCAATTACCGTTTTGTGGAG ATTTGCAATTTTATATCTTGAAATTAGCTAGGTAAAAAGATATGAAAACT TTTATTCAGGCCATAGTAGATTATCTTAACCCTATTCAACCTAGGCTTTT AGGGGCGGTTCAGAACTAGGGGGGGGGGCTTTTCCTGTACCACCCCTTAA CTTTTGATCTAGTGGGTCTTTTTAGATGAAATTTGGCACACAAGATCCTT GTCACGTAAGGTAACTTTTGACAAAAAAATTTTTTGATGACGTCACTCAT CATGCCCAAAGTGAGCAAAAACCTGAAATTTCCTTTGTTCTTATAAATAA CTATTGTATTCTAACAAAAGCTTTAGAAAAAATTTGCCTGAGTTTAAAAT GCTTATTTTATCCTAAATATTCAATAAATTACGGTTTAAACGATATATTT GACATTAAAAATAAATTTGTATTGGAAAAGTGTCAATTTTTGTGACACCT TACTGTCAGAAATGTCATCATGCTCAAGGTGTGAAAATCTATAGGTGTCA AATTTTTTCTTATTTTGAAGCTAAATAAAAGTTAGGAATTTACAGAAAAT TTCAAGGCAAAAGCTCTATTATTTCAGGACCTATTACCAATAGATTGACC TCCGAACAGAAAGAGCCCCCCCCCCCTAGTACGAATAGGGTTATTACACG AAAAACAGTCAATTCATGGGCCACAATTGGGGAACATCTGTATGGGAATG AACCGTAAATTTGAAGCTTTTTTCTAATTTTTTGTAAAATTTGGAAATTA CTTAAGAATACTCAACCCTCAGCCAAAGTTTATTATTCTTATAAAAAAAG TGTGTCGGTAAATTCTGCGAATTTTGAAACTTCTAAAAGGGACTCATTTT ACCTAATTTGACCAATTTTCGATATTTCAAGAAGCAAAAAAGTCAAAATT TTCTCATTTGTACAACCCTTGTTGGGCTGAGATATTTAATTTNAAAGTGT GTCGGTAAATTCTGCGAATTTTGAAACTTCTAAAAGGGACTCATTTTACC TAATTTGACCAATTTTCGATCTTTCAAGAAGCAAAAAAGTCAATATTTTC TTATTTGTACAACCCTTGTTGGGCTGAAATATTTAATCTACTGATTTTTC AAGCCCTTACAGGGGTTACAAGGTAAAAAAGAATTCTTTTGGGCGGCACA TACCCAATTCTCTCAAAAGTTTTAAACTGGGATCAAAAGACTGTTGGGAC GAGACTAGCCGGTACCAAACCCCCGCAGCGGNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN TTATTTCTGTATTGGATGTGTTACTTTGTTCGAGTGTTACAAAGTTTGGA ATCTTGAAGTAAGCTGTGAGTAGAAGCGAAAAGTTGATGGGGTCAGGTTG AGTCTAATTATGTCCAACTTTAAGCTTCTTACTGATTGACTAATGATTCA CTAATGACTTTATCAGTATTGAAAGGCCCTTGAGAACTACTTTTTCCTAA ATACATGAAATCTAGTTACGACATTGCTTCAAGTTCTTTAGATGAATTAC TTTGAAATTTTGATAGTAATTTTTGATAATTGTTCTTTCCTTATCTACAA TTTATACTTTTTAGTTAATGGAAAGTGGGGATCATGGGGCTCATATGGAT CATGTAACAATAAATGTGGTGGAGGTGTTCAAGAACGATTCCGTTATTGT AATAATCCCGCCCCCGCCCATGGTGGTAGTGGTTGCCCTGGATACGCCAA AATGGTCAGAGCTTGCAATACACACAAGTGCCCAGGTA

Coding sequence (CDS) from alignment at sc0005268:106..4343-

>TCONS_00044266 ID=TCONS_00044266|Name=TCONS_00044266|organism=Clytia hemisphaerica|type=CDS|length=3036bp|location=Sequence derived from alignment at sc0005268:106..4343- (Clytia hemisphaerica)
TTAATGGAAAGTGGGGATCATGGGGCTCATATGGATCATGTAACAATAAA
TGTGGTGGAGGTGTTCAAGAACGATTCCGTTATTGTAATAATCCCGCCCC
CGCCCATGGTGGTAGTGGTTGCCCTGGATACGCCAAAATGGTCAGAGCTT
GCAATACACACAAGTGCCCAGGTTAAACGGTAATTGGGGCAAATGGGGAG
GCTTCAATTCTTGCAACAAACGATGTGGAGGAGGTCTACAAACAAGATAC
AGATCATGCAATAACCCAACACCTGCTCATGGTGGAAAATCATGTCCTGG
TTCTCACGCTCACTCGNGATACAGATCATGCAATAACCCAACACCTGCTC
ATGGTGGAAAATCATGTCCTGGTTCTCACGCTCACTCGCAATCATGCAAC
ACTCAAAAATGCCCAGTCAATGGCAATTGGGGATCATGGGGTTCATATGG
ATCATGTAACAATAAATGTGGTGGAGGTGTTCAAGAACGATTCCGTTATT
GTAATAATCCCGCCCCCGCCCATGGTGGTAAAGGATGTCCTGGATACGCC
AAAATGGTCAGAGCTTGCAATACTCATAAATGCCCAGGTCAACGGCGATT
GGGGCAAATGGGGAGGATTCAATTCTTGTAACAAACGATGTGGAGGAGGT
CTACAAACGAGATACAGATCATGTAATAACCCAACACCTGCACATGGTGG
AAAATCATGTCCTGGTTCTCCCGCTCACTCACAATCATGCAACACTCATA
AATGTCCAGTTAATGGAAAGTGGGGATCATGGGGCTCATATGGATCATGT
AACAATAAATGTGGTGGAGGTGTTCAAGAACGATTCCGTTATTGTAATAA
TCCCGCCCCCGCCCATGGTGGTAGTGGTTGCCCTGGATACGCCAAAATGG
TCAGAGCTTGCAATACACACAAGTGCCCAGGTTAAACGGTAATTGGGGCA
AATGGGGAGGCTTCAATTCTTGCAACAAACGATGTGGAGGAGGTCTACAA
ACAAGATACAGATCATGCAATAACCCAACACCTGCTCATGGTGGAAAATC
ATGTCCTGGTTCTCACGCTCACTCGNGATACAGATCATGCAATAACCCAA
CACCTGCTCATGGTGGAAAATCATGTCCTGGTTCTCACGCTCACTCGCAA
TCATGCAACACTCAAAAATGCCCAGTCAATGGCAATTGGGGATCATGGGG
TTCATATGGATCATGTAACAATAAATGTGGTGGAGGTGTTCAAGAACGAT
TCCGTTATTGTAATAATCCCGCCCCCGCCCATGGTGGTAAAGGATGTCCT
GGATACGCCAAAATGGTCAGAGCTTGCAATACTCATAAATGCCCAGGTCA
ACGGCGATTGGGGCAAATGGGGAGGATTCAATTCTTGTAACAAACGATGT
GGAGGAGGTCTACAAACGAGATACAGATCATGTAATAACCCAACACCTGC
ACATGGTGGAAAATCATGTCCTGGTTCTCCCGCTCACTCACAATCATGCA
ACACTCATAAATGTCCAGTTAATGGAAAGTGGGGATCATGGGGCTCATAT
GGATCATGTAACAATAAATGTGGTGGAGGTGTTCAAGAACGATTCCGTTA
TTGTAATAATCCCGCCCCCGCCCATGGTGGTAGTGGTTGCCCTGGATACG
CCAAAATGGTCAGAGCTTGCAATACACACAAGTGCCCAGGTTAAACGGTA
ATTGGGGCAAATGGGGAGGCTTCAATTCTTGCAACAAACGATGTGGAGGA
GGTCTACAAACAAGATACAGATCATGCAATAACCCAACACCTGCTCATGG
TGGAAAATCATGTCCTGGTTCTCACGCTCACTCGNGATACAGATCATGCA
ATAACCCAACACCTGCTCATGGTGGAAAATCATGTCCTGGTTCTCACGCT
CACTCGCAATCATGCAACACTCAAAAATGCCCAGTCAATGGCAATTGGGG
ATCATGGGGTTCATATGGATCATGTAACAATAAATGTGGTGGAGGTGTTC
AAGAACGATTCCGTTATTGTAATAATCCCGCCCCCGCCCATGGTGGTAAA
GGATGTCCTGGATACGCCAAAATGGTCAGAGCTTGCAATACTCATAAATG
CCCAGGTCAACGGCGATTGGGGCAAATGGGGAGGATTCAATTCTTGTAAC
AAACGATGTGGAGGAGGTCTACAAACGAGATACAGATCATGTAATAACCC
AACACCTGCACATGGTGGAAAATCATGTCCTGGTTCTCCCGCTCACTCAC
AATCATGCAACACTCATAAATGTCCAGTTAATGGAAAGTGGGGATCATGG
GGCTCATATGGATCATGTAACAATAAATGTGGTGGAGGTGTTCAAGAACG
ATTCCGTTATTGTAATAATCCCGCCCCCGCCCATGGTGGTAGTGGTTGCC
CTGGATACGCCAAAATGGTCAGAGCTTGCAATACACACAAGTGCCCAGGT
TAAACGGTAATTGGGGCAAATGGGGAGGCTTCAATTCTTGCAACAAACGA
TGTGGAGGAGGTCTACAAACAAGATACAGATCATGCAATAACCCAACACC
TGCTCATGGTGGAAAATCATGTCCTGGTTCTCACGCTCACTCGNGATACA
GATCATGCAATAACCCAACACCTGCTCATGGTGGAAAATCATGTCCTGGT
TCTCACGCTCACTCGCAATCATGCAACACTCAAAAATGCCCAGTCAATGG
CAATTGGGGATCATGGGGTTCATATGGATCATGTAACAATAAATGTGGTG
GAGGTGTTCAAGAACGATTCCGTTATTGTAATAATCCCGCCCCCGCCCAT
GGTGGTAAAGGATGTCCTGGATACGCCAAAATGGTCAGAGCTTGCAATAC
TCATAAATGCCCAGGTCAACGGCGATTGGGGCAAATGGGGAGGATTCAAT
TCTTGTAACAAACGATGTGGAGGAGGTCTACAAACGAGATACAGATCATG
TAATAACCCAACACCTGCACATGGTGGAAAATCATGTCCTGGTTCTCCCG
CTCACTCACAATCATGCAACACTCATAAATGTCCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_027903XLOC_027903Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00044266-exon-sc0005268-1575043694:4170..4343TCONS_00044266-exon-sc0005268-1575043694:4170..4343Clytia hemisphaericaexon
TCONS_00044266-exon-sc0005268-1575043694:3632..3802TCONS_00044266-exon-sc0005268-1575043694:3632..3802Clytia hemisphaericaexon
TCONS_00044266-exon-sc0005268-1575043694:3107..3349TCONS_00044266-exon-sc0005268-1575043694:3107..3349Clytia hemisphaericaexon
TCONS_00044266-exon-sc0005268-1575043694:106..279TCONS_00044266-exon-sc0005268-1575043694:106..279Clytia hemisphaericaexon
TCONS_00044266-exon-sc0005268-1510915933:4170..4343TCONS_00044266-exon-sc0005268-1510915933:4170..4343Clytia hemisphaericaexon
TCONS_00044266-exon-sc0005268-1510915933:3632..3802TCONS_00044266-exon-sc0005268-1510915933:3632..3802Clytia hemisphaericaexon
TCONS_00044266-exon-sc0005268-1510915933:3107..3349TCONS_00044266-exon-sc0005268-1510915933:3107..3349Clytia hemisphaericaexon
TCONS_00044266-exon-sc0005268-1510915933:106..279TCONS_00044266-exon-sc0005268-1510915933:106..279Clytia hemisphaericaexon
TCONS_00044266-exon-sc0005268-1491911889:4170..4343TCONS_00044266-exon-sc0005268-1491911889:4170..4343Clytia hemisphaericaexon
TCONS_00044266-exon-sc0005268-1491911889:3632..3802TCONS_00044266-exon-sc0005268-1491911889:3632..3802Clytia hemisphaericaexon
TCONS_00044266-exon-sc0005268-1491911889:3107..3349TCONS_00044266-exon-sc0005268-1491911889:3107..3349Clytia hemisphaericaexon
TCONS_00044266-exon-sc0005268-1491911889:106..279TCONS_00044266-exon-sc0005268-1491911889:106..279Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00044266-proteinTCONS_00044266-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0005268supercontigsc0005268:106..4343 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.38208 0.258282 0 0.283075 0.56951 0.166362 0.259818 0 0.126605 0.440026 0.557888 0.19053 12.5064 11.1961 0.168945 0.210253 1.98654 2.54653 60.3927 69.0384 18.9257 32.9278 11.1987 21.2876 15.2101 15.6039 0.651647 0.125102 0.0948857 0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000884TSP1_rpt
Blast
BLAST of TCONS_00044266 vs. Swiss-Prot (Human)
Match: HMCN1 (Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2)

HSP 1 Score: 207.223 bits (526), Expect = 1.394e-59
Identity = 114/286 (39.86%), Postives = 153/286 (53.50%), Query Frame = 3
Query:    3 VNGDWGKWGGFNSCNKRCGGGLQTRYRSCNNPTPAHGGKSCPGSPAHSQSCNTHKCPVXXXXXXXXXXXXXXXKCGGGVQERFRYCNNPAPAHGGKGCPGYAKMVRACNTHKCPVNGNWGKWGGFNSCNKRCGGGLQTRYRSCNNPTPAHGGKSCPGSHAHSX---------------------------------YRSCNNPTPAHGGKSCPGSHAHSQSCNTQKCPVNGKWGSWGSYGSCNNKCGGGVQERFRYCNNPAPAHGGSGCPGYAKMVRACNTHKCPG 761
            V+G W +W  +  C + CG G QTR R+CNNP+  HGG+ C G+      CN   CPV+G W +W  +G+C+  CG G Q R R CNNP PA GG  C G    ++ CN   CP++G W  W  +++C+  CGGG + R R C++P P +GG+ C GS   S                                  YR+C+NP P++GG++C G  +  Q CNT  CPV+G WGSW S+  C+  CGGG + R R C++P P  GG  CPG    V  CN   CPG
Sbjct: 4585 VDGSWSEWSLWEECTRSCGRGNQTRTRTCNNPSVQHGGRPCEGNAVEIIMCNIRPCPVHGAWSAWQPWGTCSESCGKGTQTRARLCNNPPPAFGGSYCDGAETQMQVCNERNCPIHGKWATWASWSACSVSCGGGARQRTRGCSDPVPQYGGRKCEGSDVQSDFCNSDPCPTHGNWSPWSGWGTCSRTCNGGQMRRYRTCDNPPPSNGGRACGGPDSQIQRCNTDMCPVDGSWGSWHSWSQCSASCGGGEKTRKRLCDHPVPVKGGRPCPGDTTQVTRCNVQACPG 4870          

HSP 2 Score: 186.422 bits (472), Expect = 2.106e-52
Identity = 109/285 (38.25%), Postives = 146/285 (51.23%), Query Frame = 3
Query:    3 VNGDWGKWGGFNSCNKRCGGGLQTRYRSCNNPTPAHGGKSCPGSPAHSQSCNTHKCPVXXXXXXXXXXXXXXXKCGGGVQERFRYCNNPAPAHGGKGCPGYAKMVRACNTHKCPVNGNWGKWGGFNSCNKRCGGGLQTRYRSCNNPTPAHGGKSCPGSH---------------------------------AHSXYRSCNNPTPAHGGKSCPGSHAHSQSCNTQKCPVNGKWGSWGSYGSCNNKCGGGVQERFRYCNNPAPAHGGSGCPGYAKMVRACNTHKCP 758
            V+G + +W  + +C+  CG G+Q R R CN P PA+GGK C GS    ++C    CPV+G+W  W  +  C   CG G Q R R CNNP+  HGG+ C G A  +  CN   CPV+G W  W  + +C++ CG G QTR R CNNP PA GG  C G+                                  A    R C++P P +GG+ C GS   S  CN+  CP +G W  W  +G+C+  C GG   R+R C+NP P++GG  C G    ++ CNT  CP
Sbjct: 4528 VHGGFSQWSAWRACSVTCGKGIQKRSRLCNQPLPANGGKPCQGSDLEMRNCQNKPCPVDGSWSEWSLWEECTRSCGRGNQTRTRTCNNPSVQHGGRPCEGNAVEIIMCNIRPCPVHGAWSAWQPWGTCSESCGKGTQTRARLCNNPPPAFGGSYCDGAETQMQVCNERNCPIHGKWATWASWSACSVSCGGGARQRTRGCSDPVPQYGGRKCEGSDVQSDFCNSDPCPTHGNWSPWSGWGTCSRTCNGGQMRRYRTCDNPPPSNGGRACGGPDSQIQRCNTDMCP 4812          
The following BLAST results are available for this feature:
BLAST of TCONS_00044266 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HMCN11.394e-5939.86Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2[more]
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