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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044353 ID=TCONS_00044353|Name=TCONS_00044353|organism=Clytia hemisphaerica|type=transcript|length=312bp
TAGAAGCTACTGAGTGGTTTAACTCAAAGACACTATAGAAAtttgaaata
caatttttcgaaaaaaacaacTAAAGTTAAACACAATGTCAACTGATACC
AATGGACATGCTACAATAAatgaGGTTTCCAACCTATCCATCAAAGGACT
GGGTGATATTCAACTCAAAACACCTCACATGACATCATCAACAGCTTCCA
AGACAGGATCATTCAAGGTGAAAGCCGGTATGGCACAGATGGCGAAAGGA
GGGATTGTCATGGATGTCACCAATGCTGCTGAAGCTAGAGTTGCTGAAGA
AGCTGGTGTAAG Run BLAST on NCBI transcript from alignment at sc0005436:3167..4204+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044353 ID=TCONS_00044353|Name=TCONS_00044353|organism=Clytia hemisphaerica|type=transcript|length=1038bp|location=Sequence derived from alignment at sc0005436:3167..4204+ (Clytia hemisphaerica)
TAGAAGCTACTGAGTGGTTTAACTCAAAGACACTATAGAAAtttgaaata
caatttttcgaaaaaaacaacTAAAGTTAAACACAATGTCAACTGATACC
AATGGACATGCTACAATAAGTAAGACtgctttttcaaattgaataggTTT
CTAAGATTGAAATTTATTCAAACCGTTTTGGCATAGATTATGAGGATTTA
ACTTTATGAGAaaatttgtttgctttttttcgGACACCCTGTTTACATAA
AGTGATTGTGTCTAGTTGGCTCAACGTCTCAACACCAGATTGATTGAGTT
TGTTTTTGAGTTcattaaaaatcgaatttcattttaaatttttagatgaG
GTTTCCAACCTATCCATCAAAGGACTGGGTGATATTCAACTCAAAACACC
TCACATGACATCATCAACAGCTTCCAAGACAGGTACCAATTCAGACCTCT
ACATTCTTAATCATAATAAAAGCAAAACAAGATTGATTGTGGCATGAAGT
GAAAATCAAAACggacctttttttataagcaagtgtctaccTCTTATTAT
GCTTAGTATTCTATCGTTCTTGAaaaatagagccattgtttggGTACCAA
AAGCTGAGTTATTCTACTAATTTCGCTTATTTGAAATTNATAAGCAAGTG
TCTACCTCTTATTATGCTTAGTATTCTATCGTTCTTGAaaaatagagcca
ttgtttggGTACCAAAAGCTGAGTTATTCTACTAATTTCGcttatttgaa
atttaaaaaatgagaaagtttAAGCTCAACACTACAAAATAGGCAAGTTG
TACCATCATCATTATGAAATGTTCAAAGTAAATTTCTCGCTCACTTCAGA
AGCATTCATAAACTTTTCAGTTTGATATCTAATAAAGGATGGCTAcaata
attatttattatttttttaacttttactcCAGGATCATTCAAGGTGAAAG
CCGGTATGGCACAGATGGCGAAAGGAGGGATTGTCATGGATGTCACCAAT
GCTGCTGAAGCTAGAGTTGCTGAAGAAGCTGGTGTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044353-exon-sc0005436-1491911889:3167..3285 | TCONS_00044353-exon-sc0005436-1491911889:3167..3285 | Clytia hemisphaerica | exon |
| TCONS_00044353-exon-sc0005436-1510915933:3167..3285 | TCONS_00044353-exon-sc0005436-1510915933:3167..3285 | Clytia hemisphaerica | exon |
| TCONS_00044353-exon-sc0005436-1575043694:3167..3285 | TCONS_00044353-exon-sc0005436-1575043694:3167..3285 | Clytia hemisphaerica | exon |
| TCONS_00044353-exon-sc0005436-1491911889:3512..3598 | TCONS_00044353-exon-sc0005436-1491911889:3512..3598 | Clytia hemisphaerica | exon |
| TCONS_00044353-exon-sc0005436-1510915933:3512..3598 | TCONS_00044353-exon-sc0005436-1510915933:3512..3598 | Clytia hemisphaerica | exon |
| TCONS_00044353-exon-sc0005436-1575043694:3512..3598 | TCONS_00044353-exon-sc0005436-1575043694:3512..3598 | Clytia hemisphaerica | exon |
| TCONS_00044353-exon-sc0005436-1491911889:4099..4204 | TCONS_00044353-exon-sc0005436-1491911889:4099..4204 | Clytia hemisphaerica | exon |
| TCONS_00044353-exon-sc0005436-1510915933:4099..4204 | TCONS_00044353-exon-sc0005436-1510915933:4099..4204 | Clytia hemisphaerica | exon |
| TCONS_00044353-exon-sc0005436-1575043694:4099..4204 | TCONS_00044353-exon-sc0005436-1575043694:4099..4204 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005436 | supercontig | sc0005436:3167..4204 + |
Blast
The following BLAST results are available for this feature:
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