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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044502 ID=TCONS_00044502|Name=TCONS_00044502|organism=Clytia hemisphaerica|type=transcript|length=1014bp
GCAGATTAACTACCTTCATTACATTCAGTGACTATGAAGGGTAGTGTTGC
CCCAACATATTGAAGGCATTATTTTACTcgataaagttttaaaaaatcaa
aaatccttTATTTCATTCAGTGATTATAAAGGGTAAaataatgtttcaaa
atctctTTCCTAGAAATGGTAATGGAGATAATATCCCTGCAGCTCCTCAG
GAACCTGCAGAAGAACATGCTGATGAGGTCCAGCCCATCAACGAACAACC
TCCAGCCCCTACTGACAGATTTGAACTCGATCCAGAGGCGGCTGAAGAGA
AATGGGAACTCCCAAACAATCTTTTAGAATACATCCACAAATATATCAAA
CTGCATGTAGCTGATAAAGATATCAAAGACAGCATTGTTTGGGAAAATCC
TGTACCAACAAATCTAAAACAGGTACCTGATCTTGACAGCTACATCCGCA
CGATACTGTCAAATAAtaacaaatcaataactcttaaaTCAGAAAAGACA
TTAAAGACAATTCAAGATAAAATGTTTTTGGTCTTTGgaccacttttgaa
aatttgggatGCAGTTGACCAGGAAAAAAGCCGAAATCCTGAGGATGAAT
CAACCGTCCACCTCTCGCATCTTCTTGACCAAACAATACTTTTGCTGTCT
CAGATCCAAAACTCATGCAACTATCACAGGAGAGAGAATATTTTGTCAAC
ACTGATTGACTCCTCATCAAGAGTAAAAGACATCTTAAAGAACCAAAGTC
AAGAGCTTAACAAGGCTGATAACAAGCATTTATTTGGAGAAGAATTCGAA
ACCAAATTGATTAAAGACACCAAAGCTATCAAAAAGTCAGAATCTGTATT
TACTGGAGTGAAAGCATCATCATCTACGTCAACTAGACCCAGATTCCCTG
CAATTGGTTCAAAAAGGCCCTTTCCAGGAGGCTCTTTTCCAGCAAGCCGT
GGAAGAGGGCATTCAAGACCAGGCTTCTCATTCAGAGAAGAGGTGAAGGA
AGAACTGAACTGGT Run BLAST on NCBI transcript from alignment at sc0005692:1..2167- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044502 ID=TCONS_00044502|Name=TCONS_00044502|organism=Clytia hemisphaerica|type=transcript|length=2167bp|location=Sequence derived from alignment at sc0005692:1..2167- (Clytia hemisphaerica)
GCAGATTAACTACCTTCATTACATTCAGTGACTATGAAGGGTAGTGTTGC
CCCAACATATTGAAGGCATTATTTTACTCGATAAAGTTTTAAAAAATCAA
AAATCCTTTATTTCATTCAGTGATTATAAAGGGTAAAATAATGTTTCAAA
ATCTCTTTCCTAGAAATGGTAATGGAGATAATATCCCTGCAGCTCCTCAG
GAACCTGCAGAAGAACATGCTGATGAGGTCCAGCCCATCAACGAACAACC
TCCAGCCCCTACTGACAGATTTGAACTCGATCCAGAGGCGGCTGAAGAGA
AATGGGAACTCCCAAACAATCTTTTAGAATACATCCACAAATATATCAAA
CTGCATGTAGCTGATAAAGATATCAAAGACAGCATTGTTTGGGAAAATCC
TGTACCAACAAATCTAAAACAGGTACCTGATCTTGACAGCTACATCCGCA
CGATACTGTCAAATAATAACAAATCAATAACTCTTAAATCAGAAAAGACA
TTAAAGACAATTCAAGATAAAATGTTTTTGGTCTTTGGACCACTTTTGAA
AATTTGGGATGCAGTTGACCAGGAAAAAAGCCGAAATCCTGAGGATGAAT
CAACCGTCCACCTCTCGCATCTTCTTGACCAAACAATACTTTTGCTGTCT
CAGATCCAAAACTCATGCAACTATCACAGGAGAGAGAATATTTTGTCAAC
ACTGATTGACTCCTCATCAAGAGTAAAAGACATCTTAAAGAACCAAAGTC
AAGAGCTTAACAAGGCTGATAACAAGCATTTATTTGGAGAAGAATTCGAA
ACCAAATTGATTAAAGACACCAAAGCTATCAAAAAGTCAGAATCTGTATT
TACTGGAGTGAAAGCATCATCATCTACGTCAACTAGACCCAGATTCCCTG
CAATTGGTTCAAAAAGGCCCTTTCCAGGAGGCTCTTTTCCAGCAAGCCGT
GGAAGAGGGCATTCAAGACCAGGCTTCTCATTCAGAGGTAAGAAAATTTC
CTATCTTAAACCAAAAAATATCAACTTGTTTTGTACCTCCAAAACCGAGT
CCCATTCCTCCACTAAGACAGGTCCAGGAAGAACAAGACCTTTCTTGTGT
GCACCCTCTAGTAAAATCACTGTTTCCTCAGAAACTAGTCAAAAACCTGC
CAAAGGCAGGTCGAACGAAGTTTTATTTGAAAAATTGGGAAAAACTAACA
CAAGATCCAGAGATACTGAGAACAGTTCAAGGATATCAAATACCCTTTGT
TTCAACTCCAAGGCAAAATCAAATTCCCAAATCTCCAAACATGTCAAAAG
AGGAGATATCACTAGTGGATCAGGAGATAGAGCAAATGTTGGAAAAGAAT
GCTATAGAAACAATTCATTTTCAAAACCAAAATCAATTTCTAAGTTCTCT
GTTCCTGGTTTCCAAAAAGGATGGAGGGAACAGACCAGTGATAAATCTGA
AGTCCCTAAACAAACACATTCCTTACCTTCATTTCAAGATGGAAAGCTTG
TCCTTACTCAAAGAACTTCTAAAAAAGGGGGACTTCATGGTCAAGATAGA
CCTTTCGGACGCCTATTTCTCAATCCCGTTAAGTCAAAAATCCAGGAAGT
ATGTGAGATTCAAGTGGAAACAAAAAATTTACCAATTTCTTTGCCTGTGC
TTCGGCCTTGCTCCAGCACCAAGAGTCTTTACAAAAGTGATGAAAGTTCC
TATAGCCCTATTGAGAAGGTTGAATGTCCGTCTAATAGTTTACTTGGACG
ACATTTTACTCCTGGCGTCTTCCATTCAAGAGATAAGAATGGCCCGGGAC
ACTTTGATGTTTTTACTTCAACATCTGGGATTCACAATCAACATGAAGAA
GTCAGTTCTAGAACCAGTTCATCAGATTCAATTTCTGGGGGTGGAAGTGG
ACTCGTTGAATTAAAAATTGAGCCTGCCACCAGAGAAAATGGAAAAGATC
ATTTCCCAGTGTCAGAATATGCTGGAATCTTCTCAGGTATCGATAAGGGA
TCTCACAAAACTTCTTGGCCTCTTGTCCTCAGCAGCAGTAGCAGTTCTCC
CTGCACCTCTTCAGTACAGAGCTATACAAAGCCAACAGATAAAAGAGCTG
TCGAGACACAAAAATTTCGACTCAATGATTTCCTTGTCAGAAGAGGTGAA
GGAAGAACTGAACTGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044502-exon-sc0005692-1575043694:1181..2167 | TCONS_00044502-exon-sc0005692-1575043694:1181..2167 | Clytia hemisphaerica | exon |
| TCONS_00044502-exon-sc0005692-1575043694:1..27 | TCONS_00044502-exon-sc0005692-1575043694:1..27 | Clytia hemisphaerica | exon |
| TCONS_00044502-exon-sc0005692-1510915933:1181..2167 | TCONS_00044502-exon-sc0005692-1510915933:1181..2167 | Clytia hemisphaerica | exon |
| TCONS_00044502-exon-sc0005692-1510915933:1..27 | TCONS_00044502-exon-sc0005692-1510915933:1..27 | Clytia hemisphaerica | exon |
| TCONS_00044502-exon-sc0005692-1491911889:1181..2167 | TCONS_00044502-exon-sc0005692-1491911889:1181..2167 | Clytia hemisphaerica | exon |
| TCONS_00044502-exon-sc0005692-1491911889:1..27 | TCONS_00044502-exon-sc0005692-1491911889:1..27 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005692 | supercontig | sc0005692:1..2167 - |
Blast
The following BLAST results are available for this feature:
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